Trematomus bernacchii (emerald rockcod): 117494387
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Entry
117494387 CDS
T09643
Name
(RefSeq) scavenger receptor cysteine-rich type 1 protein M160
KO
K06545
CD163 antigen
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tben04090
]
117494387
CD molecules [BR:
tben04090
]
Proteins
117494387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRCR
L_HMGIC_fpl
SRCR_2
Motif
Other DBs
NCBI-GeneID:
117494387
NCBI-ProteinID:
XP_034001175
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MMLLLFLFLLLCTAIAKGEDRLILINGSNPCEGYIQIYHDNKLGYIGDKHWSNKTEDVVC
KSTQCGKGVGSTQEPAMLPIDRVWLNEVECKGDELHLGECTHPGFGISQFDTGTLRKIQC
SNKINISLQGYACAGAVQYSTDAGQTYPGYFCGDSGWDKDASNILCKSLKCGTAKEIPKK
PWITLKQSEKMWADCSGIKGLTNLWQCATEKKGSACPNPATVICSDHEILQLSGDASNVC
SGRLEQRVGEAFTPFRNNNHSKEWCERMHCGTSANSSLAADGLQLNCTDHVRVVLMDNGE
PSRCYGEVYIMRNNSPQPVCASGWTNTEADVVCKELRCGSSVLSNDEKSPRGAEMDNGIM
HNVECSGKESSLWHCRAQRDKKLRCSSKAYVVCSDSMEVKLKDTPGKCAGRLEIKYEGKW
QRVDKKGWTDTNSEVVCNQLKCTKSIKKNKDDFQKYSPGSATFLSKTITCGKDDVSISKC
VTRTTSNRRNSDFGRPDSNVNKEEAVGITCEGHKMIILEEDSCSGKVGIKTLQQTYWLSG
SNATWNQETANTVCRETHCGEALNVTNTQPGPEEKVWDKLYNCSHNETSLFDCGETQNPK
DLNFTIATVKCSGVKTFNLSEDCWGYVNVCLKEKCGGVCANPWTDDDSSMVCKSQHCGEH
VLKPITKTRERRDVKFKSVHSTEKTHNPTKCNLVSFDDNDKSCDDNPAYVVCSGSVKARF
TPSRENCSGGLEVNYENKWLQVCKDALKDNKTRNTICREQGCGQAVDEIKDGPKTTKGPV
ISQIQCSGDDTVTQCMMKTNDGPCTPADLQCSSSSTFVLVGGDTACSGNLLVDSKEKERS
AVSTEGWTETMGEILCSNLKCGNLMSNETRKTAASWTTSFSCAGVQNLESIWDCEKKTSS
SNPNQIFIKCQDDPKVKLSAKCTGELKVNDLEVCSTNWEDRYSRLVCQELNCSNAIGFSV
DKNPIKDKEYFHVNCEKNHYQIGQCKRVEGKCDTKLVSVFCAGNVEFNSTEKCGGQIQVN
YRNKWEKVCPLATTFPEKLLEKLCKKLDCEGYNSSIKGSDDLKEVDLATTTLSCTKDHND
PRHCVEIKSCPNEKPAEIYCNGYVSKFIKLEVPSFPTVGIILGVGLLLVLVIIIVVIIRI
CIVTKGKNISLRILRKRMSTKEVEIESGDYDNVPDMSNQMEDLGAARFREDGSFHSNNDV
SDAAEMQPLTLQTLTAAEGEHLLQVVPMDKVSDGVTVEEEDPQEDYDDIEAYPEFTQTEA
EVHESPQESTAEEPLLVEGDDDYLVPGQDG
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgctcctcttcctcttcctcctgctctgcactgccatcgctaaaggtgaggac
cgtctgattttgattaatggaagcaacccgtgtgaaggctacatccaaatctaccatgac
aacaagctgggctacatcggggacaaacactggagcaacaaaactgaagacgtggtttgc
aagagcactcagtgtggtaaaggagttgggagcacccaggagcccgccatgttgcccatc
gatcgagtgtggctgaacgaggtggaatgcaaaggggacgagcttcacctgggcgagtgc
acgcatcccggcttcggcatcagccagttcgacactgggactctgaggaagatccaatgt
tcaaataagatcaacatcagcctgcaggggtatgcgtgtgcgggagcggtccagtactcc
accgatgcaggacagacatatcctgggtacttctgtggggacagcggctgggacaaagat
gcatcaaatattttgtgcaaaagcctgaagtgcggtacagccaaggaaattcccaagaag
ccgtggatcactctcaaacaatcagagaagatgtgggcagattgttcaggcatcaaaggc
ctaactaatctgtggcagtgtgcgactgagaaaaaaggttcagcgtgtcccaatcctgcg
actgtcatatgctcagatcatgagatactgcaactctccggagacgcatccaatgtgtgt
tctggtcggctggagcagagggtaggtgaagccttcactcctttcagaaacaacaatcac
agtaaggagtggtgcgagcggatgcactgcggaacatctgccaactccagcctagctgct
gacggcctacagctcaactgcacagatcatgtgagagtggttctgatggacaatggggaa
cccagccgctgctatggtgaagtctatattatgcgtaacaactctcctcagccggtgtgc
gcctcgggctggaccaatacggaagctgacgtcgtctgcaaggagctacgctgcggcagt
tctgtgctcagcaacgatgagaagagtcctcgaggagcggaaatggacaatgggataatg
cacaatgtggagtgctcagggaaagagtcgtccctgtggcactgcagagcccagcgggac
aaaaagctcagatgttcttccaaggcatacgtagtctgttcagacagcatggaggtgaaa
ttgaaggacactcctgggaaatgtgccggcagactagagatcaagtacgagggcaaatgg
cagagggtcgataaaaaaggatggacagatacgaattcagaggtcgtctgcaatcaactg
aaatgtacaaaaagcattaagaagaataaggacgattttcaaaaatacagcccgggttca
gctacatttctgtctaagactataacttgtgggaaagatgatgtctccatatctaagtgt
gtcacaaggactaccagcaaccgcagaaactcagactttggaaggccggattcaaacgtg
aataaggaggaggcagtgggaataacctgtgaggggcataaaatgataattctggaagaa
gattcctgctctggcaaggtggggataaaaaccctccaacaaacttactggctctccggg
tctaacgcaacatggaaccaagagacggcaaacaccgtgtgtcgggagacgcattgtggg
gaagctttgaatgtcactaacacccagcctggtccagaagaaaaggtttgggataaattg
tacaactgctcacacaacgaaacatctctgtttgactgtggagaaacacaaaatccaaaa
gacctcaatttcacaattgccactgtgaaatgctcaggagtaaaaacatttaacctgtcc
gaagactgttgggggtacgtcaatgtttgtttgaaagagaagtgcggtggtgtgtgtgcg
aatccgtggacagacgacgactccagtatggtgtgtaaatcccagcactgtggtgaacat
gtcctaaagcccatcaccaagactagggaacgaagggacgtgaagttcaagagtgtgcac
tccacagagaagactcacaacccgaccaagtgtaacttggtcagctttgatgacaatgat
aagtcttgtgacgataatccagcatatgtcgtttgctcaggtagtgtcaaagccagattt
actccttcccgagaaaattgttctggaggtttggaagtgaactacgaaaacaaatggctc
caggtttgcaaagatgctcttaaagacaacaaaacacgaaacaccatctgtcgagagcag
ggctgtggtcaggcagtagatgagattaaagatggacccaaaacaacaaaaggtcctgtc
atttcacaaatacagtgttctggagatgacacggtcacacaatgtatgatgaaaactaat
gatggcccatgcactcctgctgacctccaatgctccagctcgagtacgtttgtgctagta
ggtggtgacactgcctgtagtggaaatctgttagttgactcgaaggagaaagaaagaagt
gctgtttccactgaaggctggacagaaactatgggggagatactttgcagcaatcttaaa
tgcggcaatttaatgtcaaatgagacaagaaagacagctgcatcctggacaacgagcttc
agctgtgcaggtgtacagaatctggagtccatctgggactgtgagaaaaaaacgtcatct
agcaacccaaaccagatctttattaaatgtcaagatgatcctaaggtcaaactttcagca
aagtgtactggtgaattgaaggtaaatgaccttgaggtgtgcagcacaaattgggaagac
aggtactcacgtttggtttgccaagaactgaattgcagcaacgccattggtttctctgtt
gacaaaaacccgattaaggataaagagtacttccatgtcaactgtgagaaaaaccattat
caaatcggccagtgcaagagagtcgagggaaagtgtgatacaaagttggtttcggttttc
tgtgctggcaatgtcgagttcaactctacagaaaaatgtggaggtcagattcaagtcaac
tatcgaaataagtgggaaaaagtgtgtcccctggccacaacatttccagagaaacttctg
gaaaaactgtgtaaaaagcttgattgtgaaggctacaatagtagcataaagggatctgac
gatttaaaagaggtcgacttggcaacaacaacactgagttgcaccaaagatcacaatgac
cctaggcactgtgttgaaataaagagttgtccgaacgaaaaaccagcggagatctactgt
aacggttacgtgtccaagtttataaagcttgaagtcccttcgttccccacagtgggcatt
atcctgggagtaggattacttttggttctggtgataataattgtcgtaattatccgaatc
tgcattgtcaccaaaggcaagaatatatcgttgagaattttgagaaagagaatgtcgaca
aaagaagtagagattgagagtggagactacgacaacgtcccggacatgtcaaaccagatg
gaggacttgggagcagccagattcagagaagatggttccttccattccaacaatgatgtc
agtgatgctgctgagatgcagcccctgaccctccagaccctcactgctgctgaaggagaa
cacctcctccaggttgttcccatggataaagtgtcagatggggtgaccgttgaggaggaa
gacccgcaggaggactacgacgacattgaagcctaccctgaattcactcagaccgaagca
gaagtccacgagagcccccaggagagcaccgcagaggaacctctcttagtggagggagac
gatgattacctggtgccaggccaggatgggtga
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integrated database retrieval system
