Trematomus bernacchii (emerald rockcod): 117494421
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Entry
117494421 CDS
T09643
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117494421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117494421
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117494421
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117494421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-RING_10
ANCHR-like_BBOX
RING_XB3-XBAT31
zf-RING_5
U-box
MobL
zf-UBR
zf-Nse
zf-RING_4
DUF2959
Motif
Other DBs
NCBI-GeneID:
117494421
NCBI-ProteinID:
XP_034001225
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MSLSKPEEQLAYELSCPICLQLFSDPLVLPCGHNYCRSCIGKSVDIKDQTPPRCPECREE
YQGFESLQRNFKLCSIIEGYRATAPQLDWQPDTVGGEVFCDHCIDEQLAAVKTCLKCEVS
LCSRHLQRHNEKEAFRAHAVVEPLKELGMKACATHRRPFEYFCSNDMTLMCSTCFIEGHH
YDHDVLTFSAADQEMRAALESRSKVVSFRLQITESVLQKTAEEQGASEAIGDKLVNKAVT
IMDSMAALVDRYRERLHVLLEEERSMRRQSWQYGLNALEEQQQQLVEVQRNAEEVLSETD
PCVFIHRFMQIENKLKEVSTGNFPSVVPLKAPLNTKRLQAGLKTQDFRSEMIPLLNSLHI
LLNPLDLTFNLCTAHQNLIVSNDLRTVKYSPSKQSYAEHPERFTSAPQILCSQGFSSGEH
IWVVEVGPGSMWSMGVCYKSILRRGDHSRLGHNSVSWRLQWKNNKLTVCQSSCNVALGEM
TNHPLRIEIALDYEAGTLIFHNTKGHREHLHTFRVVFREPVYPAFSIHSNTQESWITLHS
GM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtccaagccagaggagcagctagcctacgagctaagctgccccatctgcctt
cagctcttctccgatcccttggttctcccctgtggacacaactactgccgatcctgtatc
ggaaagagcgtcgacatcaaggaccaaacacctccacggtgtccagagtgccgcgaggag
taccaagggtttgaatccctgcagaggaacttcaaactctgcagcatcatcgagggttac
cgagccaccgctccacagctggactggcagcctgacactgtggggggggaggttttctgc
gaccactgcatagacgagcagttggcggccgtgaagacgtgcctgaagtgcgaggtgtcg
ctgtgttccagacaccttcagaggcacaacgagaaggaggcgttcagggcccacgccgtg
gtggagcccctgaaggagctggggatgaaggcctgtgccactcaccggcgtccctttgag
tatttttgctccaacgacatgaccttgatgtgcagcacgtgcttcatagagggacaccac
tacgaccacgatgttctcaccttcagcgccgcagaccaggagatgagggcggcgctggag
agccgcagcaaggtggtttccttcaggctgcagatcacagagagtgtcctgcaaaagaca
gcagaggagcaaggagcgtctgaagccatcggagacaaactggtgaacaaggcggtcacc
atcatggacagtatggctgcactggtggacaggtacagggagcgcctgcatgtgctgctg
gaggaggagaggagcatgcgcagacagagctggcagtatggactcaatgcactggaggag
cagcagcagcagttagtggaggtccagagaaacgctgaagaggtcctcagtgagacagac
ccatgcgtcttcatacacaggttcatgcagattgagaataagctgaaagaggtctccaca
ggcaactttccctccgtggtccccttgaaggctccgctgaacaccaagcgtctgcaggca
ggcctcaaaacccaagacttccgctccgaaatgatccccctcctgaactccctccatatc
ctcctgaaccccctggacctcaccttcaacctctgcaccgcccaccagaacctgatagtg
tccaatgatctgcgcacggtcaagtacagccccagcaagcagtcgtacgcagagcaccca
gagcgtttcacaagcgcaccccagattctgtgcagccaggggttctccagtggggagcac
atatgggtggtggaagtggggcccggcagcatgtggtccatgggcgtgtgttacaagagc
atccttcgccgtggtgaccacagccgcctaggacacaactctgtttcctggcggcttcag
tggaaaaacaacaagctgacggtgtgccagtcctcctgcaacgtggctctgggggaaatg
accaatcacccgctcaggattgagatagcactggactatgaggctgggactttaatattc
cataacaccaaagggcacagggagcacctgcacaccttcagggttgtgttcagggagccc
gtttacccagcgttcagtatccattcaaacacacaagagtcctggatcacactgcacagt
gggatgtaa
DBGET
integrated database retrieval system
