Trematomus bernacchii (emerald rockcod): 117494451
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Entry
117494451 CDS
T09643
Symbol
parapinopsina
Name
(RefSeq) parapinopsin a
KO
K04251
long/medium wavelength-sensitive opsin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tben04030
]
117494451 (parapinopsina)
G protein-coupled receptors [BR:
tben04030
]
Rhodopsin family
Vision
Opsin
117494451 (parapinopsina)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
117494451
NCBI-ProteinID:
XP_034001264
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MVHFSLHDGNSSSSHSSVNEELLSRTGYTILAVIMGVFSVCGIFLNVLVIVVTVRHRQLR
QPLSYALVNLAICDLGCAVFGGLPTTVTSAMGYFSLGRAGCVLEGFAVSFFGISSLCTIA
IISVERYIVVCYPQGAVLFQTRHAVSGVVLSWLWSFLWNTPPLFGWGSFELEGVKTSCAP
NWYSRDVGNMSYIILYFMLCFTVPFTVIVVSYSKLLWTLRQVTKLQICEAGSTNRVEMQV
ARMIVVMVLAFLVTWLPYAGMALAVIMDSSLYINPIIATIPVYLAKSSTVYNPMIYIFMN
RQFRGYAVPTILCGRNPWATESQVTEDETMVSTLNKLPRVSPKQSLKE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacttttccttacatgatggaaactcctcatcctctcacagttcagtcaacgag
gagctcctgtctcggactggctacacaatactggccgttatcatgggtgtgttttccgtg
tgtgggatcttcctcaacgtcctggtgattgtggtgactgtgagacacagacagctgagg
cagccactcagctatgccttagtaaatctggccatatgtgacctgggctgtgctgtattt
ggaggtctgcccaccacagtaaccagtgccatgggatacttcagcctgggacgcgcaggc
tgtgttttagagggatttgctgtctccttttttggtatatcaagtctgtgtaccattgcg
ataatctctgtagaacgctacatagtggtgtgctatccccagggggccgtcctgttccag
acaagacatgctgtttccggagtggtgctgtcctggctgtggtcgtttttgtggaacact
ccacctctatttggttggggtagttttgagctggagggcgtcaaaacctcctgtgcgcct
aactggtacagccgggatgtcgggaacatgtcctacatcatcttatactttatgctgtgc
tttactgtgcccttcacggtcatcgtagtatcttactcaaaacttttatggaccctccgg
caggtgaccaagctgcagatatgtgaggctggcagcacaaatcgtgtggagatgcaggtg
gcacgtatgatagtggtgatggtgttggccttcctagtgacctggctgccatatgctggc
atggccctcgctgtcatcatggactccagtttatatattaaccccatcatcgctaccata
ccagtttacttggctaagagcagcactgtctacaaccctatgatatacattttcatgaac
agacagtttcggggatacgctgttcccactatcctgtgtggaaggaacccgtgggcaacc
gaatcacaagttactgaggatgagaccatggtttctactctcaacaagctcccaagagtc
tcacccaaacaatctttgaaagaataa
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