Trematomus bernacchii (emerald rockcod): 117494495
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Entry
117494495 CDS
T09643
Symbol
calcrl2
Name
(RefSeq) calcitonin gene-related peptide type 1 receptor
KO
K04577
calcitonin receptor-like
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117494495 (calcrl2)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117494495 (calcrl2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tben04030
]
117494495 (calcrl2)
G protein-coupled receptors [BR:
tben04030
]
Secretin receptor family
Calcium-regulating peptide
Calcitonin
117494495 (calcrl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_2
HRM
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
117494495
NCBI-ProteinID:
XP_034001320
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MGIFGKDSLTALSHNRNMWRTLTLSLVVALALGTEVSQSEDVATIVNGSEVQQDKFSDIS
TVLGNSRHQILAAQFECYLKIIHDPPRTEEGSFCNRTWDGWLCWGDSTQGTVMQMCPEYF
LDFDPAEKVTKVCNPGGQWFHHPESNRVWTNYTQCQAHTKDKLKFAISLYYLAMVGHGLS
IVSLIICLIIFSYFKSLSCQRISLHKSMFLSFILNSIVTIMWLSLTVANNQAITASNPVS
CKVLAVLTQYTSTSNYFWMLCEGIYLHTLIIVAVFVGEQQLFWYYVLGWGFPIIPAVTYA
VARGLFFNDKCWISSHTHLLYIIHGPIQAALLVNFFFLLNIVRVLITKLKETHCAESTAY
MKAVRATLILIPLLGVQYILLPWRPEGRISRAIYDFFVNIFCHFQGLLVAIIFCFCNTEA
QTALRRKWHQWKSAWGKTGWGDTTMSHNHFNHHNNSSFTETSRATINLEDAANSKRDENS
HFLSLEQEKANGQQKTSSNGEADMLNKLETTDI
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggaatatttggaaaagacagtttgacagctctctcacacaacagaaacatgtggagg
actctaacactatcactggttgttgcattggcattgggcacagaggtgtcccagtctgag
gatgtggcgaccatcgtgaatggttcggaggtgcagcaggacaaattcagcgacatttcc
accgtactgggaaattcccgacatcagatcctggctgctcagttcgagtgctacctgaag
ataatccatgacccaccacgcacagaagaaggcagtttctgtaaccggacgtgggacggc
tggctgtgctggggggactccactcaagggaccgtcatgcagatgtgtccggagtacttc
ctggattttgaccctgctgagaaggttaccaaggtgtgtaatccgggaggccagtggttc
caccacccagagagcaacagagtttggaccaactacacccagtgtcaggcccacaccaaa
gacaaactcaagtttgccatcagtctgtactacctggccatggtgggtcacggcctgtcc
atcgtctctctgatcatctgcctcatcatcttctcctacttcaagagtctgagctgccag
agaatctccctccacaagagcatgttcctctccttcatcctgaactccatcgttaccatc
atgtggctctcgctcactgtggccaataaccaggccataaccgccagcaaccctgtgagc
tgtaaggtcctggctgtcctgactcagtatacatccacctccaactatttctggatgttg
tgtgagggcatctacctgcacacactcatcatagtggccgtcttcgtaggggaacagcag
ctcttctggtactacgtcctgggatggggtttcccgatcattcctgccgtcacatacgct
gtggctcgcggtctcttcttcaacgacaagtgttggatcagctcacacacacacctgctc
tatatcatccatgggcccattcaggctgcactactagtgaactttttctttctcctgaac
atcgtacgtgttttaatcaccaagttgaaggagacccactgcgctgagtccacagcctac
atgaaggcggtgagagccacgctcatcctcatccctctgctgggagtccagtacatcctg
ttaccatggagacccgagggacgcatcagccgggccatctatgacttctttgtcaatatc
ttctgccacttccagggactcctggtggcaattatattctgtttctgcaatactgaggcc
cagacagcgctgcggaggaagtggcatcagtggaagtctgcctggggtaaaaccggctgg
ggagacacgaccatgagccacaaccacttcaaccaccacaacaactcctccttcaccgaa
accagccgcgccaccatcaacttggaggacgctgcgaattcgaaacgagacgaaaacagc
cacttcctgtccctggagcaggagaaagccaacgggcagcagaagacaagcagcaacgga
gaggcggacatgctcaacaagttggagaccaccgacatctga
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