Trematomus bernacchii (emerald rockcod): 117494524
Help
Entry
117494524 CDS
T09643
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117494524 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117494524 (xpc)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117494524 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
117494524
NCBI-ProteinID:
XP_034001367
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MAKRRGGAAETEAGAKKLKQVLKKGCGAKARGKKKDAGNGIKQEEDEIKTKVQPKPRSST
KRGAEKKNSNTSKTTTAVKTSKYFQSPVKEETDSEDDCNMVTSAAPAITMKIMKTEEEEE
GSEEDEDDWEEVEELSGPLGPPGPSEPVLPIQPVEIEIEIETSEVRKKKKRQAEFETYLR
RMMNKIKKDVLVDTHKVHLMCLIAGGMFRSSLCSEPDLLAITLSLLPTHYSMVAKERIDQ
NYLSGLLKWFRATFTLNPSLSCEERPDPRALLERRLASLSGRDHQEMTHMFLLVLRSLQL
FCRLVISLQPIPLKAPSTKGKGATTSPGAPGKGDTSQDTSKNSSPESKVSPGTKRPAGGW
NIKGGRGGKKAKTIAIKEEDEKTITSGGQRPKNSKRRSIASKVTYKEESNSDEEKKEGGL
SDEDEFQATSEEGSEESEGGSKSKKGTKGKGKSQSTAAPKRRSSEGGGKEEGNEREVDDK
KEEGITSIRKKQRSGNKAKGPGADEWLEVFLEKTSSWVCVHVEQGVGLPHLCSQNATTPV
TYVVAVDGHGFVKDLGRKYDPTWLTTSRKRRVDEDWWDETLGPFLGPEDERDKKEEKELQ
SRLMNKPLPVSIAEYKNHPLYALKRHLLKYDAIYPATAAVLGYCRGEPVYSRDCVHSLHS
KDTWLKEARTVRLGEEPFKMVKGFSNRSRKARMASGQTEEKDLAVFGEWQTEEYQPPLAV
DGKVPRNEYGNVYLFKPCMLPVGCVHLRLPNLNRVARKLEMDAAPAVTGFDFHGGYSHAV
TDGYIVCEELEEILRAAWAEEQEIQKQKEKEKKEKRVISNWTLLLKGLQIREKLKQRYGK
LNQGLLQGEEAAGLSSDEEGDEGGSPSDKTASETLAMSWPQNKLAEEDGGSISGLKRTAK
TKREKKGQEKHMFPFEKV
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcggagagggggtgcagcagagacagaggccggtgcaaagaaactgaagcag
gttctgaagaagggctgcggagccaaagcgagagggaagaagaaagatgcaggtaatggc
atcaaacaggaagaggatgagatcaagacgaaggtccaacccaaaccacgttcctccaca
aaacgaggagcagaaaaaaaaaattccaacacgtctaaaacaaccactgctgtcaaaacc
agcaaatacttccagtcgccggtgaaagaggagactgacagtgaagatgactgtaacatg
gtgacctcagcagcgcctgccattacgatgaaaatcatgaaaacagaggaagaggaggag
ggcagtgaggaagacgaggacgattgggaggaagtggaggagctctccgggccactgggt
ccacctggtccgtcggagcccgtcctgcccattcagccggttgagatagagattgagatt
gagacctcagaggtcaggaaaaagaaaaagaggcaggcggagtttgagacgtatctgagg
cggatgatgaacaaaatcaagaaggacgtgctggtagatacacacaaggtccacctgatg
tgcctgatagcgggggggatgttccgcagcagtctgtgcagtgaacccgacctgctggcc
atcactctgtcgctgctgcccacacactacagcatggtcgccaaggaacgcatcgaccaa
aactacctctctggactgctcaaatggtttagagcaacattcaccctcaaccccagtctt
tcctgtgaggagcgtccagacccccgggctctgctggagagacgtctggccagcctgtcg
ggcagagaccaccaggagatgactcatatgttcctgttggtcctgaggtctctgcagctc
ttctgccgattggttatttctttgcagccgattcctctcaaagccccatcaaccaagggt
aaaggggctacaacatctccaggggccccaggaaagggagacacaagccaggatacatcc
aagaactcctctcctgagtcaaaggtctctcctggcaccaagagacctgcaggagggtgg
aatatcaagggaggccgaggaggaaagaaagcaaagactatagcaattaaggaagaagat
gagaagactataacatcaggagggcagaggccaaagaactcaaaacgccgcagcatcgcc
tcaaaagtcacctacaaggaagaaagtaacagcgacgaggaaaaaaaggagggtgggctc
agtgatgaggatgagtttcaggcgaccagtgaggaaggcagtgaggagtcagagggaggg
tctaaatccaaaaaggggacaaaggggaaaggcaagagccaaagcactgcagctccaaag
agaaggagtagcgaaggggggggaaaggaggagggaaatgagcgagaggtagatgacaaa
aaagaagaaggaattacaagcatcaggaaaaagcaaagaagcgggaacaaggcaaaaggg
cctggagcggacgagtggttggaagtgtttctggagaaaacgtcctcctgggtttgtgta
cacgtggagcagggtgtcgggttgcctcacctctgctcacagaacgcaacaacgccggtg
acgtacgtggtggcggtggacgggcacggctttgtgaaggacctggggaggaagtacgac
cccacctggttaacgacgtccaggaagaggagggtggatgaagattggtgggacgaaaca
ctagggcctttcctgggacccgaagatgagagggacaaaaaggaagaaaaggagctccag
agcaggctaatgaacaaacctctgccagtctcaatagcggagtataagaaccacccgctg
tacgccctaaagagacacctgctgaaatacgatgccatctaccctgcaacagctgctgtc
ctgggatactgcaggggagagcctgtctactccagggattgtgtgcactccctccactcc
aaggacacttggctaaaagaagcacggactgtcagactaggagaggagccatttaaaatg
gtgaaaggcttctctaatcgttcccgtaaagccaggatggcgtccgggcagacagaggag
aaggacttggctgtgtttggagaatggcagactgaagaataccagccgcctttagctgtg
gatgggaaggttccccgcaacgagtacggtaacgtctacctgtttaagccctgtatgttg
ccggtgggctgtgttcacctcaggctgcccaacctgaaccgcgtggcgaggaagctggaa
atggacgccgcccccgccgtcacgggcttcgattttcatggaggatactcacacgctgtc
actgatgggtacattgtgtgtgaggagcttgaggagattctcagagcagcctgggcggag
gaacaggagattcagaaacagaaggagaaagagaaaaaagaaaagagggtgatctccaac
tggactctgctgttgaaggggctccagatcagagaaaaactcaaacagcgctacggaaag
ttaaaccaaggtcttcttcaaggggaggaggccgccgggctttcttcagatgaggagggg
gatgaggggggaagtccttcagataagacggcatctgagactctggccatgtcctggcct
cagaacaaactggctgaggaggacggggggagcatcagcggactgaagaggacagcgaag
acaaaacgagaaaagaaaggacaagagaaacacatgttcccatttgaaaaagtgtga
DBGET
integrated database retrieval system
