KEGG   Trematomus bernacchii (emerald rockcod): 117494685
Entry
117494685         CDS       T09643                                 
Symbol
plod1a
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben00310  Lysine degradation
tben01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:tben00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    117494685 (plod1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117494685 (plod1a)
Enzymes [BR:tben01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     117494685 (plod1a)
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117494685 (plod1a)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 117494685
NCBI-ProteinID: XP_034001508
LinkDB
Position
Unknown
AA seq 732 aa
MRLQRVLLFLALSVCPLFSLTNCEEQRVPEEKLLIVTVATQDTEGFKRFLVSAKHFNYTV
KVLGRREKWRAGDYMSATGGGQKVRLLKEALQEMKNEDTIILFTDSYDVVFSSGPKELLK
KFQQAKHKVVFSSESLIWPDRHLEDKHPHVTEGNRFLGSGGFIGYLPSIREMAADWKGED
SDSDQLFFTNIYIDPVKRKSINITVDNKCRMFQNLHGALDEVVLKFEDGRVRARNVLYDT
LPVVVHGNGPTKLQINYLGNYIPNIWTFETGCTACNEGLLPLEDLQESEYPLVLIGIFIQ
KPTPFVTVFFERLLKLQYPKNRLKLFIHNQEAHHESQVSLFLKDHGSLYQDVRVSGPEEE
MDTAASRNLAIDVCRKDEGCDYFFTLDIEVVLKNKNTLKILIEQNLPFVAPMITRAGRLW
SNFWGALSAEGYYARSEDYVDIVQGRRVGVWNVPYVSSVYLVKASLLRSELTEFDLFNSD
ILDPDMAFCHNIRKQGVFMFVTNMQTFGRIVSTETYQTSHLHNDLWQIFENPVDWQERYI
HENYTYIMRDKLIETPCPDVYWFPIFSDVACDHIVEEMEHFGKWSGGGNTDVRIQGGYEN
VPTIDIHMNQINFEKEWHKLLLEYIAPITEKMYPGYYTKCATPLNFVVRYKPDEQPLLAP
HHDASTFTVNIALNSKEVDYQGGGCRFLRYDCSIEATRKGWTLLHPGRLTHYHEGLPTTW
GVRYIAVSFVDP
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgagacttcagcgcgtgcttttgtttttagctttatctgtctgcccacttttctctctg
actaactgtgaagagcagcgagtccccgaagagaaacttctcatcgtgacagttgcaacc
caagacactgaaggcttcaagcgtttcttggtgtcggctaaacattttaactacactgtc
aaggttcttggtcggcgtgaaaaatggagagcaggcgactacatgtcggctacaggaggg
ggccagaaggtacgactgctgaaagaggctctgcaggaaatgaagaatgaagacacaatc
atcctttttactgacagctacgacgtggtcttctcctcgggtcccaaagagctgctcaag
aagttccagcaggccaaacacaaggtggtgttctcctccgagagcctgatctggcccgac
agacacctggaggacaaacacccccacgtcaccgagggcaaccggttcctaggctcagga
ggtttcattggctaccttcctagcatcagagagatggctgctgactggaagggagaggac
agtgacagtgaccagctgttcttcaccaacatctacatcgatcctgtgaaaaggaaatcc
ataaatatcacagtggacaacaaatgcagaatgttccagaacctccatggagccctcgat
gaggtggtgctgaagtttgaggatggacgtgtacgtgccaggaatgttctgtatgacacc
ctgcctgtggtcgtccatgggaacggaccaaccaagctccagatcaactacctggggaac
tacatccccaacatatggacgtttgagacaggatgcacagcgtgtaatgaggggctcctc
ccactggaagatcttcaggagagcgagtacccactggtgcttatcggcatcttcattcag
aagcccaccccttttgttacggtgttctttgaacgcctcctgaagctccagtaccccaag
aacagactgaaactcttcatccacaaccaggaagctcatcatgagagtcaggtcagcctt
ttcctgaaggatcatgggagcctttatcaggatgtcagggtgagcgggcctgaggaggag
atggacactgctgcctcccgcaacctggccatcgatgtgtgccggaaagacgagggctgt
gactatttcttcaccttggacattgaagtggtcttaaagaacaaaaacacactcaaaatt
ctcattgaacaaaaccttccctttgtggccccgatgataactcgcgctggccgactgtgg
agcaacttctggggggccctcagtgcagaaggctactacgccaggtctgaggactacgtg
gacatagtgcaaggacgcagagtgggtgtgtggaatgtcccgtatgtgtccagtgtgtac
ctggtgaaggccagtctgctccggtctgagctcactgagttcgatctgttcaactcagac
atcttagaccccgacatggccttctgccacaacatccgcaagcagggagtcttcatgttt
gtgaccaacatgcagacttttggtcgcatcgtgtcaacagagacctaccagaccagccat
ctccataacgacctgtggcagatctttgaaaacccagtggactggcaggagcgctacatc
catgagaactacacctacatcatgagagacaagctgatcgagactccctgtcccgatgtg
tactggttccctattttctccgatgtcgcctgtgatcacattgttgaagaaatggagcat
tttgggaagtggtcaggaggaggcaatacggacgtcagaatccagggcggctatgagaac
gtgccgacgatagatatccacatgaaccaaatcaactttgaaaaggagtggcacaaatta
ctgctggagtacatcgcaccgatcacagagaagatgtatcctgggtactacaccaagtgc
gccacccctctgaacttcgtggtgaggtacaaacctgatgagcagccgctgcttgcgcct
caccacgacgcctccacgttcactgttaacatagctctgaacagcaaggaagtagactac
cagggtggaggctgccggttcctccgctacgactgctccatcgaggccactcgtaaaggc
tggacccttttgcacccgggccgcctcacgcactaccacgaaggcctgcccaccacttgg
ggggtgcgctacatcgctgtgtcctttgtagacccctga

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