Trematomus bernacchii (emerald rockcod): 117494754
Help
Entry
117494754 CDS
T09643
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tben03009
]
117494754 (nop2)
Enzymes [BR:
tben01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
117494754 (nop2)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117494754 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
117494754
NCBI-ProteinID:
XP_034001596
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MGRKLDPTTHVKKGPGRKSRKQKGAEIELANFIPEEEATAKRLSSRSRKRAAKRVLKKKA
PKDAAQEKPKKGFTDENSEWLTPAKRKRKLEEAESGDDSDEHWENEEDLEMEDEEETKKG
IKEQGKKKKTAKVEIKEGEEKEDDDDDDDEMVDDYGAPDGSGEEEAESDGELLPIERAAK
KAQQLKEALDLDSDDDSDSDEDDAKKKKKSDSDEEEDTVQANMDEMDAFKLPGAEESAKE
GILPLDLKSIHQRIKDNIEVLCNFTKQREEGKERAEYLSLLKKDLCTYYSYNHFLLEKLM
DIFPLSELVDFLEANEIHRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIY
DSSVPVGATPEYLSGQYMLQGASSFLPVMALSPQEGELVLDMSSAPGGKTTYIAQLMRNT
GTIVANDANADRLKSVVGNIHRLGVTNTVVCNYDGRQFPKVMGGFDRVLLDAPCSGTGVI
AKDPAVKTSKDEGDIQRSAHLQKELLLSAIDSVNAESSTGGYVVYCTCSIMVEENEWVVD
YALKKRNVKLVPCGLDFGKEGFTRFKERRFHPTLKLSRRFYPHTHNMDGFFVAKFKKFSN
VVPIIPVVKEEEETGEAPEATVVTESPENKPAKGDKKKKIVPGKAVGLKGKPQTNGTATK
KKTIVPGKAGGLKGKPQTNGMAAKARQAIVKPKGKKDSPAGPTKAKKAKMDGETVKGAMA
KKPAAKTADESKASTADKQKKSPMKEKKRMGKNKFRKLQSLLKNEIE
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtaaattggatcccaccacccacgtgaagaaagggccggggagaaaatccagg
aagcagaaaggagcggagatagagttggccaatttcatacctgaggaggaagcaacagcg
aaacgtctgtcaagcagaagcaggaagagagcggcaaaacgagtcctgaaaaagaaagcg
ccgaaagatgccgctcaggaaaaaccaaagaaaggattcactgatgagaacagtgaatgg
ttgacaccagctaagaggaagcgcaaactggaagaagctgaaagtggggacgacagcgat
gaacactgggagaacgaggaagatctggagatggaggatgaggaggagacaaagaaagga
ataaaagaacaaggaaagaagaagaagactgccaaagtagaaatcaaagaaggagaagaa
aaggaggatgatgatgatgacgatgatgaaatggttgatgactacggagcacctgatggc
agtggagaggaggaagcagaaagtgatggagagctccttcccatcgagcgcgcagcaaag
aaagcacaacagctgaaggaagccttggatctggatagtgatgacgatagtgacagtgat
gaagatgatgctaaaaagaaaaagaaatccgattctgatgaggaggaagacacagtgcaa
gccaacatggatgagatggacgcattcaagctccccggggcagaggagagtgcgaaagaa
ggcatcctgcctctggacctgaagagcatccatcagaggataaaggacaacatcgaagtg
ctctgtaacttcacaaagcagagagaagaggggaaagagagggccgagtacctctctctc
ctgaagaaggatctgtgtacttactacagctacaaccacttcctcctcgagaagttaatg
gacatcttccccctttcagagctggttgatttcctcgaggcgaatgaaatccacagacct
gtcactatccgcaccaacacactgaagaccaggaggagggatctggcccaggccctgatc
aacagaggagtgaaccttgaccctttgggcaaatggtctaaagtgggtttggtcatctac
gactcctcggtacccgtcggtgcgaccccggagtatctgtccggtcagtacatgctgcaa
ggagcctccagcttcctgcccgtcatggcgctctctcctcaggagggggagttagtgctt
gacatgagctcagccccaggagggaagaccacttatatcgctcagctgatgagaaacacg
gggacgatcgtggcgaatgacgccaacgctgacagactgaagagtgtggtggggaacatc
caccgtctgggcgtcaccaacacggtggtctgcaactacgatgggaggcagttcccaaag
gtgatgggtggatttgaccgagtgctgctcgatgctccctgctcaggcaccggagtcatc
gctaaagatccggctgtgaagaccagcaaggatgaaggtgacatccagcgctctgctcac
ctacagaaggaactgcttctgtccgccatcgactccgtcaacgctgagtcctctacggga
ggatatgtagtctactgcacttgctccattatggtggaggagaatgaatgggtggtggac
tacgctttaaagaaaaggaacgtcaaattagttccctgcggacttgactttggcaaggaa
ggcttcaccaggtttaaggaacgtagattccatccaactctgaaactgtctcgccgattt
taccctcatacccacaacatggatgggttttttgtggcaaagtttaagaaattctccaat
gtagttccaattataccagtagtaaaagaagaagaggaaactggagaggctcctgaggca
acagtggtcacagaatctcctgaaaataaacccgccaaaggtgacaagaaaaagaagatc
gtccccggaaaggcagtcggcttgaagggaaaaccccaaaccaacgggacagcgaccaag
aaaaagacgatcgtccccggaaaggcaggcggcttgaagggaaaaccccaaaccaacgga
atggcagccaaggcaaggcaggcaatcgtgaagccaaaaggcaaaaaggactcacctgcg
ggaccaacaaaggcaaagaaagccaagatggatggagagactgtgaaaggggccatggcc
aagaaacctgcagcgaaaacagctgatgaatcgaaagcatcaacggctgacaaacagaag
aaatcacccatgaaggagaagaaaaggatgggaaagaataaattcagaaagctacaaagc
ctgttgaaaaatgaaatagagtga
DBGET
integrated database retrieval system
