Trematomus bernacchii (emerald rockcod): 117494787
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Entry
117494787 CDS
T09643
Symbol
dlec1
Name
(RefSeq) LOW QUALITY PROTEIN: deleted in lung and esophageal cancer protein 1
KO
K25548
deleted in lung and esophageal cancer protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117494787 (dlec1)
Cilium and associated proteins [BR:
tben03037
]
Motile cilia and associated proteins
Sperm associated proteins
117494787 (dlec1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_CFAP65_4th
HYDIN_VesB_CFA65-like_Ig
Ig_DLEC1_6th
Ig-CFAP74_4th
Ig_Dlec1_1
ASH
Cep192_D3
Cep192_D4
Ig_CFAP74_1st
Cep192_D8
Ig_CFAP65
TMEM131_like_N
Cep192_D5
Motif
Other DBs
NCBI-GeneID:
117494787
NCBI-ProteinID:
XP_034001645
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MSVSSAMLEEPESREPSLFDPSVNSHRPASGKSQDISHVLASTFKDLYTKDIIGKDTLSN
LIKTKNGRSSYHDRYVEELQQAHSEYSRRIKEADMLESHIIQARARAAATERQAYERMRE
RMGDIIDQQDLLTVQSAFSWCVDKDLLEMNNLISPQDYLPTQKPHVEAPAAIKSNPGKPT
VSYAMHVSKEPQDDGYSLIPSPEKIILGESDLSLTFESSSVTPTRRKPKEKSKQTVPRPK
WKDEPSAKDREEGLEKLQKLKHRQNFLRNPRFLPPSAQQGGTSLVLPRTKVGKKEHEKRG
MEEQSSTDDPVFLATPSVVVFTDYTVGQVYETTLELKNLTSASRTVRVIPPNTPYFSIGL
GRFPGEGGVVAPGMSCKYTVRFAPNSLGEFEDFLVVETQVEQLLVVPVMARRPPPILTLP
RVLECGCCLIGGVKFVEFLCQNVGVSAGTFCIIPKNQWPASNLRCLARTHFSEQPPFAIS
PSLFVLQPGETTVVEVVFFPTAAEKSCQMFTIVCDNCQVKDISIEGEGQLIALELVSVSG
RKEPRVVGEVHDLTAEHFVRFSPCNPHSVQEKRVIIRNNVHLELPFHWQTMKPNLHPQLP
GETPEPKHIQFHPTTDGVFHVTPITGVLPPCQEQEFLFTFCPKELEDYHSVCHLVLRDVP
QLPPESSDHGVLQPVRTGSKVSDVIVMEIEVKGSTEQYHVLLEPYAVVIPGEICICTTTC
RQFKMWNHSRTAIFFQWERMKSSCHIIEVQPSAGTIEENECFDFDLILNGGKPERVVSSL
VCHIEHRHEPVTLAVEVSFKGPLVTLSVPSVDFGLLKLGEHTQTSLILTNLTQLEAGWRL
QERQHQHPQILVEPCRGVLPPLTSCSVDVLFSPTSCQRYETELELTVENGTGCHLSVRAD
VQTPQVCLLSCELLLSELYMGVRARATVTLFNQTLLPSHFSWMAELQGELADLCSASFEP
SSGTLGPNDSLEIKVTFTSHTDVELTEIAALCEVQGMNSPLVLSIVASKIKKLSVSYSLP
SVCSPSGDESPSALALDFGDDVILKRAVTKQLLITNQTAISAPFTIEAEYFNCHASKPNN
QSEKRSTYVMKPLHSVQAKKVEEKAQEELVSGLLAHGKGAAFLVLPQNGILGAFETQTVD
VTAYTDMWGEYRDLLVCKVGDLEPSFLPMQMKVTGCPLYFQMTGPRPEYQNQGPITQFGT
HVSGGDTVSRSLRINNPTMFDIRMDWETYNIDQNDGKLVDVVVAYGEAFPLKDADGNELL
SGAVRMSGASWERNQSPGSEGTSPSLQSMTSGEEYVSEDEGEEEETCLYPAPAKKKLISV
QVRPHVGNLSDYPYCITPQQIVIPAKSSGTIHASFTPLTLSGSACESRSVGLALGFMSLD
SEMAACVPGKVIRAQGLDLDPLRVDLLAAVKPAALSVQMEEDGGALQFHASAGDLLTAES
EELLVRDFDVTRALQLKNNSEMLLHFKLGAQDPFLVLRPRSRVQSSSSSYPPTAESQTLL
LQPQHSMQVKVSFRCSLSLLDHAEQTEEELPPGVTLMHCPPGGRKLRLQQNLLIHYSNNS
LQTVPLVADLDLVSMCLSSDCIDFGICHIGQTQTLDVTLQSHGAQTYWKAVIESDEGQDV
FRVTPDFGLLGPGCSLCLQISFTPSDDGEFRAAVVLWSPLVKPPLTLQLQGTGSYDGVHW
SH
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtctcctccgccatgctggaggaaccagagagcagagaaccctctctgtttgat
ccgtctgtgaacagccacagacccgcatcagggaagtcccaggacatttctcacgtgtta
gcgagcaccttcaaggacctttacactaaagacatcattgggaaagacactttgtccaac
ctcatcaagacaaagaatggacgcagcagctaccatgacagatatgtggaagagcttcaa
caggctcattctgaatacagccggcgtataaaagaggctgacatgttggagagtcatatc
atccaggccagagctcgggctgcagccacagagaggcaggcctacgagaggatgagggag
aggatgggagacattatcgatcaacaggacctcctcacagtccaatctgccttttcctgg
tgcgtggacaaagaccttctcgaaatgaacaacctcatttccccccaggactacttacct
acacaaaaaccacatgtggaagcaccagcagcaataaaatcaaatcctggcaaacccacc
gtctcctacgccatgcacgtgtccaaggagcctcaggatgatggttactctttaattccc
agtccagagaagatcattctaggcgaatcagatctcagcttgacttttgaatcaagctca
gtcaccccaacgagaaggaaaccaaaagagaagtccaaacagaccgtacctagaccgaag
tggaaggatgagcccagtgcaaaggaccgagaagagggactggagaaacttcagaagctg
aaacatcgacaaaatttcctacgcaatcctcgcttccttcctccgagtgcacagcagggg
ggcacatccctcgtcctgcccagaaccaaagtggggaagaaggagcatgagaagagaggg
atggaggagcaaagctccactgatgatcctgtgttcctagctactccctcagtggtggtt
ttcaccgactacactgtaggacaagtatacgagactacactggagctgaaaaacttgacg
tctgccagccgtactgtccgagtcatcccccccaacactccttacttctccattggcctc
gggaggttcccgggtgaggggggtgttgttgccccggggatgagctgtaagtacacagtg
cgcttcgctccaaactcgctgggggaatttgaagacttcctggtggtggagacccaggtt
gagcagctgcttgtggtgcccgtcatggccagaagaccccctccaatactcacattacca
agagttctggagtgtggttgttgtctgattggaggagtcaagttcgtggagttcttgtgc
caaaatgttggcgtcagcgccgggacgttctgcatcatccccaaaaaccagtggccagcc
tccaacctgaggtgtctggcaagaactcacttctctgagcagccaccctttgcgatcagc
ccgtctctttttgtgctgcagccaggagagaccactgtagtcgaggtggtttttttcccc
accgctgctgagaagagctgtcagatgttcaccatagtgtgtgacaactgtcaggtgaaa
gacatttccattgaaggtgagggccagctgattgctctggagcttgtgtctgtttctggg
aggaaggagccccgggtggtgggagaagtgcacgacctcactgcagagcactttgtccga
ttcagcccctgtaaccctcactctgtgcaggagaagagagtcatcattaggaacaacgtc
cacctggagctgcccttccactggcagaccatgaagcccaacctgcaccctcagctccca
ggggaaactccagagcccaaacacatccagttccacccgaccacagacggtgttttccac
gtcaccccgataactggcgttcttcccccctgtcaggagcaagagtttctgttcaccttc
tgccctaaagagttggaggattaccacagtgtttgtcacttagtcctgagggatgttccc
cagctgccaccagagtccagtgaccacggtgtcctccagcctgtgcgcactggctccaag
gtgagcgatgtcatcgtcatggagatagaggtcaaggggtcaacagagcagtaccacgtc
ctgctggagccgtacgccgtcgtgatccccggagagatttgtatttgcacgacgacatgc
aggcagttcaagatgtggaaccacagcagaaccgccatctttttccagtgggaacggatg
aaaagcagctgccatataatagaagtgcagccctctgctggtacaatagaggagaacgag
tgttttgatttcgacctgattttgaacggagggaaaccagagagggttgtttccagtctg
gtttgccacatagagcaccgccacgagcccgtcactttggcagtggaagtctcttttaag
gggcctctagtgaccctgagtgttcccagtgtggactttgggctcctgaagctcggggag
cacactcagacctcgctgatcctcactaacctcactcagctggaagccggctggaggctg
caggagaggcagcaccaacacccacagattttagtggagccttgcagaggtgtgctgcct
cctttgacctcttgcagtgtggatgtgctatttagtcccacttcctgccagcgatatgaa
acagagctggagttaacggtggagaatggaacaggatgccacctgtcagtgcgggcagat
gttcagacgcctcaggtgtgtctgctcagctgtgagctgctcctctctgaactctacatg
ggggttcgtgccagagccaccgtcactctgttcaaccagacgctgctgccctctcacttc
agctggatggctgagctgcagggtgaactggctgatctgtgttcagccagtttcgagccg
tcctccggcactctgggacctaacgacagcttggagatcaaagtcacctttacctctcac
acagatgtggagctgacggagatagctgctctctgtgaggtccaagggatgaactctcct
cttgttcttagtatcgttgcttccaaaatcaagaaactcagtgtgtcctactcgctgcca
agtgtctgctctccctcaggtgatgagagcccctcagcgctggcacttgactttggagac
gatgttattctgaagagagctgttaccaagcagttactgataaccaatcaaactgccatc
tctgcgcctttcaccatcgaagcagagtatttcaactgccatgcctcgaagccaaataac
cagtcagagaaaagatccacatacgtcatgaagccgctgcactctgttcaagccaagaaa
gtagaggaaaaagcacaagaggagttagtgagcggcctgctggctcatgggaaaggagcc
gctttcttggtccttcctcaaaatgggattctgggagcttttgagacgcagactgtggac
gtcaccgcctacaccgacatgtggggggaatacagagatctcctcgtatgcaaagtgggg
gatctggagccctcgttcctccccatgcagatgaaggtgacaggctgccctctctacttc
caaatgacgggcccacgtccagaataccagaaccagggacccatcacacagtttggcact
catgtttctggaggtgacacggtgtccagatcgcttcgcatcaacaatcccaccatgttt
gatattcgcatggactgggaaacctataacatcgaccagaacgacggtaaactggtggat
gtggtggtggcgtacggagaagcctttcctcttaaagatgctgatggcaacgagctgctg
agcggagctgtaaggatgtctggtgcatcctgggaaagaaatcagtccccaggctctgag
ggaacgagcccctccctccaaagcatgaccagcggggaggaatatgtttctgaggatgaa
ggtgaggaagaggaaacctgtctctatcccgctcctgcaaagaaaaaactcatctccgtt
caggtcagacctcatgtgggcaacctatcggattacccatactgcatcacaccccagcaa
atagtgattccagctaaaagcagcggcaccatccacgcatcgttcactcctctgactctc
tccgggtcagcttgtgagtccagatctgtgggtctggctctgggtttcatgagtctagac
tcagagatggctgcctgtgtcccgggtaaagtcatcagagctcagggtttggatctggat
ccgctcagagtggatctactagcagccgttaagcctgcagcgctgtcggtgcagatggag
gaggacgggggggcgctgcagtttcacgcctcggccggtgatttactgacggcagaatca
gaggagctgctcgttcgggactttgacgtcacgcgggcccttcagctgaaaaacaactca
gagatgctgctacacttcaaactgggggctcaggatccatttttagtgctcaggccgcgg
agtagagtccaaagcagcagctccagctacccccccactgcagagagccagaccctgctg
ctgcagccgcaacacagcatgcaggtgaaggtgtctttccgctgctccctgtctctcctg
gatcatgccgagcagacagaggaggaacttcctcccggagttacgctgatgcattgtcct
ccaggggggaggaagctgaggctccagcagaacctcctgattcactacagcaacaacagc
ctgcagacggtgcctctcgttgcagatttggatctcgtttcgatgtgtctgtccagcgac
tgcatcgactttgggatctgccacatcggacagacacagacattagacgtcactctgcaa
agccacggagcgcagacctactggaaagcagttatagagtcagatgaaggacaggatgtg
ttcagagtgaccccagacttcgggctcctcggccccggctgcagtctctgtctccagatc
agtttcactcccagtgatgacggagagttcagggctgcggtggtcctctggtctcctctg
gtgaagccccccctcactctgcagctgcaggggacagggtcctatgatggagtgcactgg
tcacactga
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integrated database retrieval system
