Trematomus bernacchii (emerald rockcod): 117494806
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Entry
117494806 CDS
T09643
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117494806 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117494806 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tben00536
]
117494806 (shha)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C46: hedgehog family
117494806 (shha)
Glycosaminoglycan binding proteins [BR:
tben00536
]
Heparan sulfate / Heparin
Morphogens
117494806 (shha)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Intein_splicing
Vint
VldE
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
117494806
NCBI-ProteinID:
XP_034001668
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MLLWTRIVLVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTQKPVKLLQSGDRVLAADAHGNPIYTDFIM
FIDQDSTTRRLFYVIETESGEKIALTAAHLLFVGQNNTENTDEMSAVFASQVQTGQTVFV
FDAERRRLEPVCVKRIFTHEYEGSFAPVTVQGTVVVDQVLASCYAVIQDHDLAHWALAPV
RFFYWVNSLLFQRPTSAQTDGVHWYSKILFQLGTWLLDSHSIHPLGMTVYTS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtggaccagaatcgtattggtcggtctcatctgcttgtccttggtttcctct
gggatgggatgtggaccgggcagggggtatggaaggagaagacacccgaagaaactgaca
cctcttgcctacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcgga
agatacgaaggcaagatcaccagaaactccgagcgatttaaagaactgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggagcggacaggctcatgactcag
agatgtaaagacaagctgaactctctggccatctcggtgatgaaccagtggcccggggtc
aagctgcgggtcacggagggctgggacgaggacgggcaccacttcgaggagtcgctccac
tacgagggccgagccgtggacatcaccacctcggacagagacaagagcaaatacggaact
ttgtccagactggcggtcgaagcgggattcgactgggtctactacgagtccaaagcgcac
atccattgctctgtgaaagcagaaaactcagtggctgcaaagtcaggcggctgcttccca
ggatcctccacggtcaccctgcaggatggcacccagaagccggtcaaactcctccagagc
ggggacagggtcctggcagcggatgcgcacggaaacccgatttacaccgacttcatcatg
ttcatagaccaagactcgactaccaggaggcttttctacgtgattgaaaccgagtcgggg
gagaaaatcgccctcacggcagctcacctgctgttcgtgggtcaaaacaacaccgaaaac
acagatgaaatgtcggcagtcttcgccagtcaggtccaaaccggacagacggtgttcgtg
tttgacgcagagagacgtcgactggaaccagtgtgcgtaaaacggatttttacgcatgaa
tacgagggctcttttgcaccggtgaccgtgcagggaaccgtggtggtggaccaggtcctt
gcgtcctgttacgcagtgatccaggaccacgatctggcgcactgggctttggcaccagtc
cggttcttctactgggtgaactcgttgcttttccagcgtccaaccagtgcccaaaccgat
ggggtgcactggtactccaagatccttttccagttaggaacatggctcttggacagccac
tcgatccatccacttgggatgacagtatacacgagttga
DBGET
integrated database retrieval system