KEGG   Trematomus bernacchii (emerald rockcod): 117494806
Entry
117494806         CDS       T09643                                 
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
  KO
K11988  sonic hedgehog
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    117494806 (shha)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tben01002]
    117494806 (shha)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:tben00536]
    117494806 (shha)
Peptidases and inhibitors [BR:tben01002]
 Cysteine peptidases
  Family C46: hedgehog family
   117494806 (shha)
Glycosaminoglycan binding proteins [BR:tben00536]
 Heparan sulfate / Heparin
  Morphogens
   117494806 (shha)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 Intein_splicing Vint VldE Ribosomal_S6e
Other DBs
NCBI-GeneID: 117494806
NCBI-ProteinID: XP_034001668
LinkDB
Position
Unknown
AA seq 412 aa
MLLWTRIVLVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTQKPVKLLQSGDRVLAADAHGNPIYTDFIM
FIDQDSTTRRLFYVIETESGEKIALTAAHLLFVGQNNTENTDEMSAVFASQVQTGQTVFV
FDAERRRLEPVCVKRIFTHEYEGSFAPVTVQGTVVVDQVLASCYAVIQDHDLAHWALAPV
RFFYWVNSLLFQRPTSAQTDGVHWYSKILFQLGTWLLDSHSIHPLGMTVYTS
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgctgctgtggaccagaatcgtattggtcggtctcatctgcttgtccttggtttcctct
gggatgggatgtggaccgggcagggggtatggaaggagaagacacccgaagaaactgaca
cctcttgcctacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcgga
agatacgaaggcaagatcaccagaaactccgagcgatttaaagaactgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggagcggacaggctcatgactcag
agatgtaaagacaagctgaactctctggccatctcggtgatgaaccagtggcccggggtc
aagctgcgggtcacggagggctgggacgaggacgggcaccacttcgaggagtcgctccac
tacgagggccgagccgtggacatcaccacctcggacagagacaagagcaaatacggaact
ttgtccagactggcggtcgaagcgggattcgactgggtctactacgagtccaaagcgcac
atccattgctctgtgaaagcagaaaactcagtggctgcaaagtcaggcggctgcttccca
ggatcctccacggtcaccctgcaggatggcacccagaagccggtcaaactcctccagagc
ggggacagggtcctggcagcggatgcgcacggaaacccgatttacaccgacttcatcatg
ttcatagaccaagactcgactaccaggaggcttttctacgtgattgaaaccgagtcgggg
gagaaaatcgccctcacggcagctcacctgctgttcgtgggtcaaaacaacaccgaaaac
acagatgaaatgtcggcagtcttcgccagtcaggtccaaaccggacagacggtgttcgtg
tttgacgcagagagacgtcgactggaaccagtgtgcgtaaaacggatttttacgcatgaa
tacgagggctcttttgcaccggtgaccgtgcagggaaccgtggtggtggaccaggtcctt
gcgtcctgttacgcagtgatccaggaccacgatctggcgcactgggctttggcaccagtc
cggttcttctactgggtgaactcgttgcttttccagcgtccaaccagtgcccaaaccgat
ggggtgcactggtactccaagatccttttccagttaggaacatggctcttggacagccac
tcgatccatccacttgggatgacagtatacacgagttga

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