Trematomus bernacchii (emerald rockcod): 117494811
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Entry
117494811 CDS
T09643
Symbol
cspg5a
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tben00535
]
117494811 (cspg5a)
Proteoglycans [BR:
tben00535
]
Cell surface proteoglycans
Others
117494811 (cspg5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neural_ProG_Cyt
TMEM213
Motif
Other DBs
NCBI-GeneID:
117494811
NCBI-ProteinID:
XP_034001672
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All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MQGKERSFCTGCWRITLLFCVLALHLMPLPVHGNAAGTNATEQDKAANVTALLNEEEGPV
KVNEVVVAVTGSSANPDAVTQRAGRIPRAGEEEDDQSSGMFGETLVPAVDEVAVSAPPRI
SPDSAETDDLLLSNPRGKDVLEESKEVEKEEDEDRLPNTDPPWINAKDTAVFDLDRLFTT
TTAQPSVPSNPDVLHVDFFDPSSRGRGLDLAPPSPSSLAHELQGGDSTSWAMPDNYDYLT
PYEDGVSPTADEYTYSTTTDTYESDDDLRLAAGSPSRSKPRAPGSGSIIPGASVPGAGAP
VPNVPAAGGAPASLDGSDGMGGCRVGFQMTNGSCRSPCDMLPNFCFNGGQCYLIETMGVF
CRCNVQDYIWHKGARCESVVTEFQVMCLAVGTSAVVLLLLFMIVVCFAKKLHVLKTENKK
LRKRSSKYRPSSEQHNDNFSLSTIAEGSHPNVRKLCDTPPNVPHARALAYYDNIICQDDP
HSQNKLEDPVKAPPKEDDSLNIHNSLTPKHENHKVLGEDNSSEVNSLQNNMM
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggaaggagaggagcttctgcacgggatgctggagaataacgctgctgttctgc
gtcctggctctgcacttgatgccgctgcctgtccacggaaatgctgccgggaccaatgcc
actgagcaggacaaagcggccaatgtcaccgccctgcttaacgaggaggaggggcctgtc
aaggtcaatgaggtcgtggtcgctgtaaccgggagctcagccaatccggacgctgtcact
cagagggcgggacggatccctcgcgccggagaggaggaagacgaccagagcagcggcatg
ttcggcgaaactctggttcctgcggtggacgaagttgccgtttccgctccgcctcgcatc
agccccgattctgccgagacggacgacctcctgcttagcaacccacgcgggaaggacgtc
ctggaagagagcaaggaagtggaaaaagaggaggatgaggatcgtctgccaaacaccgac
ccaccttggatcaacgccaaagacaccgccgtgtttgacctggaccgcctcttcaccacc
accaccgcccagccctcggtgccctctaaccccgacgtcctccacgtggacttcttcgat
ccctcctctcgtgggcgtggcctcgacttggccccgccctctccttcatcgctggcccac
gagctgcagggaggcgactcgacctcctgggcgatgccggacaactacgactacctcaca
ccgtacgaagatggcgtgtcccccactgccgatgagtacacctacagcactaccaccgac
acctacgaaagcgacgatgatcttcgacttgccgctggatctccttctcgctccaagcct
cgagcaccagggtccgggtccatcattcctggggcttcagttccaggtgcaggagctccg
gtaccaaacgtccccgcagcaggaggtgctccagcgtctctggacggctcagacgggatg
ggtgggtgccgtgttggtttccagatgacgaacgggagttgccgctctccctgcgacatg
ctgcccaacttctgcttcaacggggggcagtgctacctgatcgagaccatgggagtcttc
tgcaggtgtaacgtccaggattacatctggcacaaaggtgctcgctgtgagtcggtggtg
acggagttccaggtgatgtgtctcgccgtcggcacctcggctgtcgtcctcctgctgctc
ttcatgatcgtcgtctgcttcgccaagaagctccacgtgctgaagacggagaacaagaag
ctgcgcaaacgcagcagtaagtaccggccttcatcggagcagcacaatgataatttctcg
ctgtccaccatcgctgagggctcccacccaaatgtaaggaaactgtgcgacacccctcct
aacgtccctcatgcccgtgcattggcttactatgataacattatctgtcaggatgatcct
cattcccagaacaagctggaggacccggtgaaggccccgcccaaagaggacgactccctc
aacatccacaactctctgacccccaaacacgagaaccacaaggtcctgggcgaggacaac
tcctcggaggtaaactcactgcagaacaacatgatgtga
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