Trematomus bernacchii (emerald rockcod): 117494812
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Entry
117494812 CDS
T09643
Name
(RefSeq) cadherin-20-like
KO
K06807
cadherin 20, type 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117494812
Cell adhesion molecules [BR:
tben04515
]
Cadherins
Major cadherins
117494812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
117494812
NCBI-ProteinID:
XP_034001683
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MGERFHLPAVASTLLPVALCILTLLPHSILGRPAEEENAGSSALLQRVKRGWVWNQFFVL
EEYTGLEPLYIGKLHSDMDKGDGSIKYILSGEGAGTTFTIDDSTGDIHALQRLDREVKSQ
YLLRAQARNRLTDRPLEPESQFIVKIQDINDNEPRFLDGPYQATVPEMSNIGTSVIQLTA
TDADDPTYGNSARVVYSIVEGQPYFSVDAKTGVVRVSLADMDREIRENYTVVIQAKDMGG
QLGGLAGTTTVNVTLGDINDNPPMFDQRLYQMSIPEAAPVGSVVGRIWAKDRDIGLNAEM
VYSIIDGDGRDQFDISTDPTNLFGIITVKKPLNFEGKPSYTLKVEGANTHLDPSLRHRGP
FKDVTIVHVSVEDVDEPPQFESPEYYVELSEDAEIGTLVKTISARDPDAANNTVRYSIDK
SSDPEKFFYVELTTGSLMTVRSLDREEIGWHNITVLAMEMNNPTKISSVSVAVRVLDVND
NPPTLTHYLEAYVCENAKAGQLVQTVTAVDPDEPLGGQRFYYSLAPEAANNPNFTLRDNQ
DNTAWILTRRGGWSHQDQTVFYLPIFISDGEQPVQSSTSTMTVRVCSCDHDGNVLSCTAE
AYTLPASLSRGALIAILACIFVLLVMILLMLSLRTHRKKPFLCDEEENVHENIVRYDDEG
GGEEDTEAFDIAAMWNPREAHHHPGKMRQDMLPEIESLSRYVPQACVMGGGDSSVHGYVL
AKLLDADMDACAPPYDSLQTYAYEGEGSVAESLSSLQSGTSNTDHEYDYLNDWGPRFKKL
AEMYGVLETNTPQMW
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggagagcgatttcatcttccagcagttgccagcaccttgctccctgtggccctttgc
attttgacccttctgccccacagcattctgggtagacctgcagaggaggaaaacgcaggc
agctcagcactgctgcagagggtgaagagaggctgggtgtggaaccagttttttgtcctt
gaggagtacaccggactggaaccactttatattggaaagctccactcagatatggataaa
ggcgacggctccattaagtacatcctgtcgggcgagggcgcgggcaccaccttcaccatc
gacgacagcacgggggacatccacgccctccagaggctggaccgggaggtgaagtcccag
tacctcctccgcgcccaggcccgcaaccgcctgacggacagacctctggagcccgagtcc
cagttcatcgtgaagatccaggacatcaacgacaacgagcccaggtttctggacgggccc
taccaggcgactgtgcccgagatgtccaatataggaacatctgtgatccagctgactgct
acggacgccgacgaccccacgtacggcaacagtgctcgggtggtctacagcatcgtggag
ggccagccctacttctctgtggatgccaaaaccggcgtggtccgtgtgtccctggcagac
atggacagggagatcagggagaactacaccgtggtcatccaggccaaagacatggggggc
cagctgggggggctcgccggcaccaccacggtcaatgtcacgctcggcgacatcaacgac
aacccgcccatgtttgaccagaggctgtaccagatgagcatcccagaggcagcccccgtg
gggtcagtggtggggcgtatctgggccaaggacagggacattgggctgaacgcagagatg
gtgtacagcatcatcgatggagatggaagggaccagtttgacatcagcaccgaccccacc
aaccttttcggcatcatcacagtgaaaaagccactgaactttgagggcaaacctagttac
actctgaaggtggagggcgccaacacccacctggacccctcactgcgccaccgcgggccc
ttcaaggacgtcaccatcgtgcacgtgagcgtggaggacgtggacgagcccccgcagttt
gaatcccctgagtactacgtggagctgtcagaggacgcagagatcggcacgttggtgaag
accatttcagctagagaccccgacgctgccaacaacactgtgaggtattccatcgacaag
tccagcgaccccgagaagttcttctacgtggaactcactactggctctctgatgacggtg
cgttcgctggaccgagaggagatcggctggcacaacatcaccgtcctcgccatggagatg
aataaccccacaaagatctccagtgtgtcggtggctgtgagggtcctcgatgtcaacgat
aatcctcccacgctgacgcactacttggaggcttatgtgtgtgagaacgctaaagcggga
cagctggtccagacggtgacggcggtggatcccgatgagccgctgggggggcaacgcttc
tactacagcctggctccagaggccgctaacaaccctaacttcaccctcagagacaaccaa
gacaacacggcgtggatcctgacgcggcgggggggctggtctcaccaggaccagaccgtc
ttctacctgcccatcttcatctctgacggggagcagccggtgcagagcagcacgagcacg
atgaccgtccgcgtgtgcagctgcgaccacgacggaaacgtcctgtcctgcaccgccgag
gcctacacccttccggcgagtctcagcaggggggcgctcatcgccatcctcgcctgcatc
ttcgtcctgctggtgatgatcctgctcatgctctcactgcgcactcaccgtaagaagccc
ttcctgtgtgacgaggaggagaacgtccacgagaacatcgtgcgctacgacgacgaaggt
ggcggcgaggaggacaccgaggccttcgacatcgccgccatgtggaacccacgagaagcg
caccaccacccgggcaagatgaggcaggacatgctgccggagatcgagagtctgtcgcgc
tacgtccctcaggcgtgcgtcatgggcgggggggacagcagcgtccacgggtacgtgctg
gccaagctcctggacgccgacatggatgcgtgcgccccgccttacgactccctgcagacc
tacgcctacgagggcgagggttcggtggcagagtcgctcagctcgctccagtcggggacg
tccaacacggaccacgagtacgactatctcaacgactgggggccacgctttaaaaaactt
gccgagatgtacggcgtgctggagacgaacactcctcagatgtggtag
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