Trematomus bernacchii (emerald rockcod): 117494860
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Entry
117494860 CDS
T09643
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117494860 (lingo4b)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117494860 (lingo4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
Ig_3
LRR_14
LRR_9
Ig_2
ig
V-set
LRR_Zer-1
LRRNT
Ig_5
C2-set_2
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
117494860
NCBI-ProteinID:
XP_034001742
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MFVESVVRWGAWSIVFQFVLGVSAGGCPPRCVCRPEAKELICSGKHLTSVPEGFSGDARR
LDLSHNKIKTVGRRQFSGLPQLQELDLSDNIISMIEVEAFQGLQNLRTLRIKNNRLKIIP
VGVFSGLSSLRFLDLSQNEILVFLDYTFKEMVNLQTLEVEENDLVFISQRAFYGLQNLQE
LNLDRSNLTSVPTEALSQLQSLARLRMLRLTISTLPNNAFRRLHRVRSLIISNWPVLDTV
ASNSLIGLNLTTLVISSCNLSVVPYSALRHLVYLRYLDLSYNPITVIQGNLLGDLLKLQE
LHLAGGSLLRIDPGAFRGLAYFRMLNVTSNQLSTLEESVFHSVGNLQVLRLDGNPLACDC
RLLWVVRRRLRLNFDGHQPTCSCPDAVRQREFKDFSEKELPRLFTCRPARIMDRRPQEAR
VEEGTTVLFSCKADGDPFPSITWISSHKKVVSPTGRIRVWPNGTLEVRFAQVQDSGTYQC
LAGNAAGNDSLTVGLYVKGLPRNRTIPYFSEEGWDEPLNTEAANSSAQMAKPYPFDAKTL
IIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHNATIDFVPRSSMGGGGEGGDGGRFTM
KLI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtcagtcgtgcgatggggggcctggagcatcgtcttccagtttgtactg
ggtgtatccgcaggaggctgtcctccacgctgtgtgtgtcgacctgaggccaaagaactg
atctgctctggcaaacatttgacctcagtgccagagggcttttccggcgatgccaggcgt
ttggatttatcccacaataagattaagactgttgggcgccggcagttttctggcctcccg
caacttcaagagttggatctcagtgataacataatctccatgattgaggtggaggctttc
caggggctgcagaacctcaggacgcttcggattaagaataaccgactcaagatcatcccc
gtcggggtgttttctggcctttccagtctgcgctttctggatttgagtcagaatgagatt
ctggtcttcctggactacaccttcaaagaaatggtgaacttgcaaacgctggaagtcgaa
gagaatgacttggtcttcatctcccagcgggctttttatggtctgcagaatctgcaagaa
ctcaatttagaccgcagcaacctgacctccgttcctacagaggctttgtctcagctccag
agcctggcacgtcttcgcatgctacgccttaccatttctacactgcctaacaacgctttc
agacgactacaccgtgtgcgtagcctcatcatttcaaactggcctgtgttagacacggtg
gctagcaacagcctgatcggacttaatttgaccacgcttgtcatcagcagctgcaaccta
agtgttgttccttactcggcactgcgtcacctggtgtatctgcgctacttggacttgtcc
tacaaccccatcactgttatccagggtaatctgctaggggacctcttgaaactccaggag
ttacacctagcaggcgggagtctgctacgaatagacccaggggcctttaggggactggcc
tactttcgcatgcttaatgtgacgtccaatcagctcagtactttagaggagagcgtcttc
cactctgtggggaacctgcaggtattgcggttggatgggaatcccctagcatgtgactgc
cggcttctctgggtggtccgtcgacgattgcgcttgaactttgatggacaccagcccact
tgttcgtgtcccgacgcagtaaggcagcgggaattcaaagacttttcagagaaggagctc
ccaaggctctttacctgccgccctgcgcgtatcatggaccgcaggccgcaggaggcaaga
gtagaggaggggactacagttctgttctcctgtaaggctgatggggatccattcccatct
atcacctggatctcatcccataagaaggtggtttctccaacggggcgaattagagtttgg
ccaaacgggactctggaggttcgttttgcccaagttcaggacagtggcacatatcagtgt
ctggcgggcaatgcagccggcaatgacagcctaactgtcggcttgtacgtgaaggggctc
cctcggaaccgaaccatcccttacttttccgaggagggctgggatgagcctttaaacacc
gaagctgccaactcctcagctcaaatggccaaaccatacccgtttgacgcgaagaccttg
atcatcgccaccaccatgggcttcctgtctttcctcagctcagtggccatctgttttgtc
ttcatgtttttctggagccagagcaaaggtcagatcaagcacaacgccactattgacttt
gttcctcgctcctcaatgggtggtggaggggaaggaggtgacggtgggaggttcaccatg
aaacttatttaa
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