Trematomus bernacchii (emerald rockcod): 117494960
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Entry
117494960 CDS
T09643
Symbol
dnm1l
Name
(RefSeq) dynamin-1-like protein isoform X1
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04217
Necroptosis
tben04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117494960 (dnm1l)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117494960 (dnm1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117494960 (dnm1l)
03029 Mitochondrial biogenesis [BR:
tben03029
]
117494960 (dnm1l)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117494960 (dnm1l)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
117494960 (dnm1l)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
117494960 (dnm1l)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
117494960 (dnm1l)
RhoA-dependent endocytosis
117494960 (dnm1l)
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
117494960 (dnm1l)
Retention of mitochondria
117494960 (dnm1l)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117494960 (dnm1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
AAA_16
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
117494960
NCBI-ProteinID:
XP_034001879
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLESLVGRDILPRGTGIVTR
RPLILQLVHIDPEDRRKTNEENGIDGEEWGKFLHTKNKIYTDFEEIRQEIETETERISGI
NKGISDEPIHLKIFSPHVVNLTLVDLPGITKLPVGDQPKDIEGQIRELIYKYISNPNSII
LAVTAANTDMATSEALKVSRDIDPDGRRTLAVVTKLDLMDAGTDAMDVLLGRVIPVKLGI
IGVVNRSQLDINQKKLVADAARDEYAFLQKKYPSLANRNGTKYLARTLNRLLLHHIRDCL
PELKTRINVLAAQYQSLLNSYGEPVEDKSSTLLQLITKFAAEYCHTIEGTAKYIETTELC
GGARICYIFHETFGRTLESVDPLGNLTTIDVLTAIRNATGPRPALFVPEVSFELLVKRQV
KRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTSLLRKRLPVTNE
MVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRMRDLPSAVPRDKAAAGGSQSGE
QTDGGTGNWRGMIRKGDEGAAGERAGLQHSYPSSPHKGYAVNLLDVPVPVSRKLSAREQR
DCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDSLQSELVGQLYKAGLLDDLLTE
SEDMAQRRNESADMLKALQKASQVIAEIRETHMW
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggaggccctcattcctgtcattaacaaactgcaggatgtgtttaacacggtgggcgcg
gatatcatccaactgccgcagatagttgttgtgggaactcagagcagtgggaagagttca
gttttagagagcctggtgggcagagacatcctgccacgtggaactggcatcgtcacacgc
cggcctcttatcttgcagctagtgcacatcgatccagaggaccgcaggaaaaccaatgaa
gagaatggcatcgacggagaagaatggggcaaatttctacacaccaaaaacaagatctac
acagactttgaagagatcaggcaagaaatcgaaacggaaacagaaaggatttccggcatt
aacaagggtatcagtgatgaacccattcacctgaaaatcttctccccacacgttgtgaac
ctcacattggtggaccttcctggcattacgaagttgccagtgggagaccagcccaaagac
atagagggtcagatcagagaactgatctacaaatacatctccaaccccaactccatcatc
ctggctgtgactgctgcaaatacagacatggcaacctcagaggcccttaaagtatcccgc
gacattgaccctgatggcaggaggacgctagcagtggtgaccaagctggatctgatggac
gccggcacagatgccatggatgtattattgggcagggtcattcctgtcaaactgggcatt
attggagtagttaacaggagtcagttggatatcaatcagaagaagttggtggcagatgcc
gcccgtgatgaatatgccttcctacaaaagaagtatccctcccttgcaaaccgaaatggt
accaaatatctcgccagaacattgaacaggttactcctgcaccacatcagagactgtctc
cccgagctgaagacgaggatcaacgtgctggcagcgcagtaccagtcgttactcaacagc
tacggtgagcctgtggaggacaagagctccacgctgctgcagctcatcactaagtttgcc
gcagagtactgccacaccatagagggcacggccaagtacatcgagaccactgaactatgt
ggtggagcaagaatctgttatatatttcatgaaacctttggtcgcactttggagtctgtg
gaccctctgggaaatctgactaccattgatgtgctcacagctatcagaaatgctacgggc
ccgaggcctgctttattcgtgcctgaggtttcgtttgagctgctggtgaagcggcaggtg
aagcgcctggaggagcccagcctgcgctgcgtggagctggttcacgaggagatgcagagg
atcatccagcactgcagcaactacagcacgcaggagttactgaggtttccaaagctccat
gatgccatagtagaagtggtcacctcgttactcagaaagagactcccagtcaccaacgaa
atggttcacaacctggtggccatcgagctggcttatatcaacactaagcatcctgacttt
gccgacgcctgtggcctcatgaacaataacatagaggagcagagacgcaacagaatgaga
gacctgccctctgctgtccccagagacaaggcagcagccggcggctctcagagcggcgag
cagacagacggcgggacggggaactggagggggatgatcaggaagggagacgagggagca
gcgggagagagagccgggctgcagcactcgtatccatcaagccctcataagggatacgct
gtcaacctgctcgatgtgcctgttccagtttccaggaagttgtctgcccgggagcagagg
gactgtgaggtcatcgagagactcatcaagtcctacttccttattgtgcggaaaaacatc
caggacagtgtaccgaaggcggtgatgcacttcctggtgaaccatgtgaaggacagcctg
cagagtgagctggtgggtcagttatacaaggcgggcctgctggacgacctgctgacagag
tccgaggacatggctcagagacgcaacgagtccgctgacatgctcaaggctttgcagaaa
gccagccaggtgatcgcagagatcagagaaacccacatgtggtga
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