Trematomus bernacchii (emerald rockcod): 117495084 Help Entry 117495084         CDS       T09643                                  Symbol si:dkey-110c1.10 Name (RefSeq) unconventional myosin-Vb   KO K10357   myosin V Organism tben  Trematomus bernacchii (emerald rockcod) Pathway tben04814   Motor proteins Brite KEGG Orthology (KO) [BR:tben00001]  09140 Cellular Processes   09142 Cell motility    04814 Motor proteins     117495084 (si:dkey-110c1.10)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tben03019]     117495084 (si:dkey-110c1.10)    04131 Membrane trafficking [BR:tben04131]     117495084 (si:dkey-110c1.10)    03029 Mitochondrial biogenesis [BR:tben03029]     117495084 (si:dkey-110c1.10)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:tben04812]     117495084 (si:dkey-110c1.10) Messenger RNA biogenesis [BR:tben03019]  Eukaryotic type   mRNA surveillance and transport factors    Factors involved in mRNA localization     Cargo complex      117495084 (si:dkey-110c1.10)    mRNA cycle factors     P-body specific factors      117495084 (si:dkey-110c1.10) Membrane trafficking [BR:tben04131]  Others   Actin-binding proteins    Myosins     117495084 (si:dkey-110c1.10) Mitochondrial biogenesis [BR:tben03029]  Mitochondrial quality control factors   Mitochondrial dynamics    Retention of mitochondria     117495084 (si:dkey-110c1.10) Cytoskeleton proteins [BR:tben04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Myosins      117495084 (si:dkey-110c1.10) BRITE hierarchy Motif Pfam:  Myosin_head DIL IQ nSTAND3 Myosin_N AAA_22 AAA_16 Motif Other DBs NCBI-GeneID:  117495084 NCBI-ProteinID:  XP_034002041 EnsemblRapid:  ENSTBNG00005008791 LinkDB All DBs Position Unknown AA seq 1655 aa AA seqDB search MTSLELYSKGARVWVPDPDAVWVSALLLKDYSPGDNNLLLQLSDGEEAHFPLASPSDLPP PGNPDILEGENNLTALSFLHEPAVLHNLRVRFLDYNSIYTYCGIVLVAINPYDQLPIYGE EVIDAYSGQDMADMEPHIFSVAEEAYRTMIREDKNQSIIISGESGSGKTVSAKFTMRYFA VVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMRT YLLEKSRVVFQASAERNYHIFYQLCASRELPEIRSFKLDAPENFRYTSQGGEMQIPGTDD LLDLERTRNAFTILGVQPDQQMELFRILAAVLHLGNVNIQASGRNSDRSYIDADDRPLAV FSKLLGVDGPQTAHWLCHRRLAVGGEMLVKPVSGQQALEARDALSKHIYGQLFTWTVQRL NSALHSQKGQTKSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFHLEQEEYI REELAWSRIEFSDNQLCINLIEGQLGLFDLLDEECRMPKGSDESWVRKLYDQHLSSKPHP HFQKPRMSNSAFVVLHFADTVQYECDGFLGKNRDTVFEELINILRASQSELVAELFQQQG NAPSVANGSVRSGKRATREHKLTVGFQFRQSLEMLMDTLNSTTPHYVRCIKPNDLKEPFM FDPRRTVQQLRACGVLETIRISAAGFPSRWTYEEFFCRYRLLLHGPLTQDQAQASCRLTL PQLIPDPDQYCFGKTKVFFRAGQVALLERLRAEKLRVAAVIIQSRVRGWLARVRFTRISW ATVTIQRYCRGALARRLALTMRYTKAALVIQKTYRMVAVRQLFLMIRQATITIQAFSRGT MARRRYRQVLVERAAVLLQARVRGWMARRAYRRVRAAVVFMQCCARRRAARRELMKLKTE ARSVEKFRELNKGMEVKLMQLQLRADQEAREAAALRETLHAEREAGSAELEALKVTVQKL ESQKQEKPPPCPVISEKEVEERRRAEEKAAQDILQLTQELQALQREKDGFCKEKEDLSAR LFEQEQAQEECVQQAVSQASASLRAELDEERRKYQGLLRDFTRLEQRYDNLREMSLLTEG TKVHRRTDSTQSLSLELPSPSTAPLSPFSSFSSCFPSPEEVRRVSVTSPTLEWRESVWSF QTPMDQLMVSMDMAKDPAVKMKGEDLAHAYDAVRVANKLLESQLRSQSHQREEELEALRG QISAASCGSSSAAGPQELQEVLEAKEQECVRLRRELKELKNTVSLRRLLTQVLPSAFTAE TSSCPSQSKPAVTGLLECRKKDENKLIKNLIIDVRVDSALSLPPGLPASVLFLCVRQADC SGDQTQARSLCSAAVTAMKAALKKHSKDVDMTALWLKNACLLHDLLRQHSPKQTLDSDDL APLTVDLSDLIRALSDLCIQVYQQLLSITEKGLQNIIVPAMLESETISGLSGSTVKLAAS RKRAGSDPRPVGGDAPSMAAVLRELGALHTALSHQALPPSQMEQAFRQLTYLISASALNS LLLRKDMCCWSRGMQIRYNVSLLEEWLRSKGLQAGGAVATLEPLIQAVQLLQAGKKSEAD AKALVQTCTALSSQQIVKILTLYTPHGDLDERVTLNFIRTVQGLLKGSSDGQPPQLLMDV RRVFPVTFPFSPPAALHAEQLVIPDSLKISFLRRA NT seq 4968 nt NT seq  +upstreamnt  +downstreamnt atgacctcactggagctatacagcaagggagcaagggtgtgggttcctgacccggatgct gtttgggtgtcagctctgctcctcaaggactacagccccggagataataacctgctgcta cagctctctgatggggaggaggcccatttccctttggcgtccccctctgatctccccccg ccggggaaccctgacatactggagggggagaacaacctgacggctctcagcttcctccat gaacctgctgtcctgcacaacctgcgggttcgattcctggactacaacagcatctacacg tactgtggtatcgtgttagtggccattaatccctatgaccagctgcccatatatggagag gaggtgatcgatgcttacagcgggcaggacatggccgacatggagcctcacatcttttct gtggccgaggaagcctaccgcaccatgatcagggaggataaaaaccagtcgatcatcatc agtggagagtctggctcggggaaaacagtctcagccaaattcaccatgcgatactttgct gtggtcggaggagcggcccagcagaccagcgtggaggagagggttctggcctccaaccca atcatggagtctattgggaatgctaaaaccactcgcaatgacaacagtagtcgttttggg aagtacatcgagatcggctttggcagaaaaggagacatcatcggggcgaacatgaggacg tatctcctggaaaagtctagggttgtcttccaagcatcagcagagaggaactaccacatc ttctaccagctgtgtgcctccagagagttgcctgaaattagatcctttaaactggatgca cctgagaatttccgctacaccagccagggaggagagatgcagattcctggcactgatgac ctgttggacctggagcgcactcgcaacgctttcaccatcctgggtgtgcagcctgaccag cagatggagctcttcaggatcctggcagctgttctgcacctcggaaatgtcaacatccag gccagtgggagaaattctgaccggagttatattgatgcagacgaccgccccctggcagtc ttctctaagctgctgggagtggacggacctcagacggcccactggctgtgtcaccgcagg ctggctgtggggggggagatgctggtgaagccggtgtccggtcagcaggccttagaagcc agagatgccctctccaaacacatctatggtcagctgttcacatggactgtccagaggctc aactccgccctgcacagccagaagggacaaaccaagtcctttataggggtgcttgacatc tatgggtttgagacttttgaccggaacagttttgagcagttctgtataaattatgccaat gaaaaactgcaacagcagttcaacaggcatgtgttccacttggagcaggaggaatacatc cgggaggagctggcctggagccggatcgagttcagtgacaatcagctgtgcatcaatctg atcgaggggcagctgggcctgttcgatctgctggacgaggagtgcaggatgcccaaaggt tcagatgaaagctgggtacggaagctgtacgaccaacacctgagcagcaagccccaccct cacttccagaaaccccgcatgtccaacagcgccttcgtcgttctgcacttcgctgacacg gtgcaatatgaatgtgatggcttcttaggaaagaatcgagacacagtctttgaggagctc attaacatcctccgagcaagtcagtccgagctggtggccgagttgttccagcagcaggga aacgctccatctgtggctaatggaagtgttcgctcaggaaaaagagccaccagagaacat aaactgacagtgggtttccagttccgacagtccctagagatgctaatggacactctgaac agcaccactcctcactatgtccgctgtattaaacccaacgatctcaaagaaccatttatg tttgaccctagaaggacggtccagcagctgagagcctgtggggtgctggagacaattcgt atcagtgctgcaggttttccatccaggtggacgtacgaggagttcttctgcaggtaccgc ctcctgcttcacggtcccctgacccaggatcaggctcaggcctcctgcagactcaccctg cctcagctcatcccggacccggaccagtactgcttcgggaagaccaaagtgtttttccgg gccggtcaggtggctctcctggagaggctgagagctgagaagctgcgtgtcgccgcggtg atcatccagagccgggtcagaggatggctcgcccgggtcagattcacccggatcagctgg gcgaccgtcaccatccagagatactgcagaggagctctagccaggcgactggccctgact atgcgctacactaaggctgctctagtgatccagaagacataccgcatggtggccgtcagg cagctgttcctcatgatccgacaggccaccatcaccatccaggccttcagcagaggaacc atggcccgccgcagatacagacaggtgttggtggagcgtgctgctgtgctgctccaggcg agggtgcgtgggtggatggcaaggcgggcgtacaggcgggttcgtgcggcggtggtgttc atgcagtgctgcgcgcgccgcagggctgccaggagagagctgatgaaactgaagacagag gcccgatccgtggagaagttcagagagctcaacaagggcatggaggtcaaactgatgcag ctgcagctcagagcagaccaggaggccagggaggctgcagctttgagagagacgctgcac gccgagcgagaggccggcagcgctgagctggaggctctgaaagtgacggtacagaaactg gagagccagaaacaagagaaacctccaccctgccctgtcatcagcgagaaggaggtggag gaaaggaggagagctgaggagaaagctgcacaggacatcctgcaactcacacaagagttg caagccctgcagagagaaaaggacggtttctgcaaagagaaagaggatctctctgctcgc ttgtttgaacaagaacaagcacaagaagagtgtgtgcagcaggctgtgtctcaggcgagt gcatctctgagggcggagctggatgaggagaggaggaagtaccagggtctcctgagagac ttcaccagactggagcagagatacgacaacctcagggagatgagtctgctcaccgagggc accaaagtccacagaaggacggactccactcagagtctgagtttagaacttccctctccc tccaccgccccgctgtcacccttctcatccttctcatcatgctttccctccccagaggag gtccgcagggtcagcgtgacttctcccaccctggagtggagagagtcagtgtggagcttc caaacaccaatggatcagctgatggtgagcatggacatggccaaagacccggctgtgaag atgaaaggagaggacctggcacacgcttatgatgctgttcgagtggccaacaaactcctg gagagccagctgcgcagtcagagccatcagagggaggaggagctggaggctctgaggggc cagatcagtgcagctagctgtggctcttcctctgctgcagggccacaggagctgcaggaa gtactagaggccaaagagcaggagtgtgtgagactgaggagagagctgaaggagcttaaa aacacagtgtcgctcagacgactcctgacacaagttctcccgtcagcgttcacagcagag acttcctcctgtccttcccaatcaaagccggcagtcactggtttgctggagtgcagaaag aaggatgaaaacaagctcattaaaaacctcatcatagacgtccgtgtggacagcgccctc tctcttcctcccggcctgcctgccagcgtcctcttcctctgtgtccgtcaggcggactgc agcggggatcagacgcaggcccgctccctctgcagcgccgctgtcaccgccatgaaggct gctctgaagaaacacagtaaagatgtagacatgacagctctgtggctgaaaaacgcctgt ctgctgcacgacctgctgcgccagcactccccgaaacagacccttgactcggacgaccta gctcctctgaccgttgatctgagtgacttgatccgcgccctgagtgacctctgcatccag gtctatcagcagctcctctccatcactgaaaaaggcctgcagaacatcatcgtccctgct atgctggagagtgagaccatctccggtctctctggctccacggtgaagttggcagcgtcc agaaagcgagccggctctgacccccgacctgtgggaggcgatgctccatcgatggcggcg gtgctgagggagctgggggcgctgcacaccgccctgtcccatcaggctctgcccccctct cagatggagcaggccttccgccagctcacctacctcatctccgcctccgctctcaacagc ctgctgctgaggaaagacatgtgctgctggagccgcggcatgcagatacgctataatgtg agtctgctggaggagtggctgcggagcaaagggctgcaggcagggggcgctgtggccaca ctggagcccctcatccaggcggttcagctgctgcaggccgggaaaaagagcgaggcggat gcaaaggccctcgttcagacctgcactgccctgtccagccagcagattgtgaagatcctg accctctacacgccccacggtgacctcgatgaaagagtcacactgaatttcatccgtact gtccagggtctcctgaaaggctcctctgacggccagcctccgcagctcctcatggatgtg agacgagtgtttcctgtcacatttcccttctcgcctcctgccgccctccacgctgagcag ttagtcatcccagactccctcaagatctcctttctacgcagagcctag

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