Trematomus bernacchii (emerald rockcod): 117495170
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Entry
117495170 CDS
T09643
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X1
KO
K24495
myomesin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117495170 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117495170 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117495170 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
V-set
ig
Pur_ac_phosph_N
Ig_J
Tissue_fac
C2-set_3
Motif
Other DBs
NCBI-GeneID:
117495170
NCBI-ProteinID:
XP_034002181
LinkDB
All DBs
Position
Unknown
AA seq
1586 aa
AA seq
DB search
MSGSLPFYQKHHRHYDRDYRSKETESKLSQYQTSSRYTAGSSTSAATSRSSGLNVSTHYG
LEASRLSPILKRAKPTYLAVDKDHQIIGYVVPIFRGSQEFGTGFSSREEARVRDSSEYMA
RRDLFTSGMEMERSEQTSRREAIRETAERISLNKRIHEHGVHFKRMNEDSLMHTPEFVIK
PRSHTVWEKQCVRLHCTVSGWPDPRVVWYKNNVAIDPVGHGDKYKLESKYNMHSLEINRC
DFDDTAQYRVSAMNSKGELSSFASVVVKRFKGDMDESLPSPRRGSTEDGPVCEYGVNFQT
HIVDKFGVTFGREGETISLGCTVIISPALHRYQPEIQWYRDDVLLSPSKWYNMHWSGDHA
TMTLAHLNKEDEGLYTLRVTTKSGYETYSAYVFVRDSEAEVERAPGAPLDVRCLDANKDY
IIVTWKQPAVDGGDSILGYFVDRCEVGTTHWVQCNDTPVKFARFPVTGLVEGRSYMFRVR
AVNQNGMSHPSRVSEPVAAMDPSDRARIRGASAPWTGQIIVTEEEPAEGIVPGRPLELQV
TEATKNYVVLSWKPPGDKGLEGVMYYVEKCVAGSDTWQRVNTEIPVKSPRFALFDLAEGN
SYSFRVRCCNAAGVGEPSDPTEASTVGDKLDIPSAPSKVVPIRNTDTSVVVSWQASSEAK
ELVGYYIEASVLDSNEWEPCNNKPVNVTRFICHGLTTGEKYVFRVRAVNAAGLSQFSPES
EPVEVKAAIGGGIPHASPAPPYGITVLECVFDSMVLSWKQPTFIGGADITGYFVDYREVI
DGVTGKWHEANIRSISERAYRVSDLKEKSKYQFQVRAANMAGVGIPSLPSDTFLCEEWTI
AVPGPPHDLQVREVRSDSLVLLWKPPVYQGRDLVNGFYIDIKEADEPVEAWKGVNTKATE
KTFFKIKNLKEGGNFVFRVRAQNKAGVGQTSEETEPVIAVTKPGTKEIVVDVDDDGIISL
NFECCDTTPDSKFVWSKDYEEIADTSRLTIETKGNKSKTIFNTAAEEDIGIYSCIVTHTD
GASSSYTLSEEELKRLLEVSHDNKFPVIPLKSELAVELLEKGKVRFWLQADKMSANGKVD
YIFNDNLISQGDKYKLNFDKNTGVIEMIMDSLTPADEGTFTFKLQDGKATNQSSLVLIGD
VFKELQKESEFQMKEWVRKQGPHFIEYLGYEVTPECCVVLKCKVGNMKKDTSALWYKDGH
EIKADENLGFTEGVLKLEIAQISKKDSGVYEVVLKDDRGKGTSTLNLTDKGFKDLMNEVF
SFIANSSTPLKITSTENGIRLYTFVSYYNDLLQVTWHYKDSAISFSDRIKSGVVGEQLWL
QISEPSEKDMGKYAIEFNDGKGGLRRTVELSGQAFDDAFAEFQRLKAAAIAERSRARVAG
GLPDVVTIQEGKALNLTCNISGDPVPEVTWLKNDREITSDEHCILKFESGKFASFIITGV
NISDSGKYSILVKNKYGTESGDFTVETTDGTPDLGVTSYWTDADGNVVFGPNTPKEKMNT
TVTGTKTPKRKESVARKLPMEKVGDTDEEKVAVKPKATDSKQTIDAKEKVADQPLTSDQS
EASVKPAGKVEEPGPVSEKQPENTEQ
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatctttaccgttctaccagaagcaccaccgccactatgaccgtgactacagg
agcaaggagacggagtccaaactgagccagtaccagaccagcagcaggtacactgctggc
agcagcacctccgctgccaccagcaggagcagtggacttaacgtgtctacacattatggg
ctggaagcgagcagactgagccctatactcaagagggccaagccaacttacttggctgtg
gataaggaccaccaaatcatcggctacgtagtacctatcttcaggggcagtcaagagttt
gggactgggttttcgagtagagaggaagcaagggtgcgggactcttctgagtacatggcc
cgcagggatttgttcaccagtggcatggagatggagaggtcagagcagacctccaggagg
gaggccattcgagagacggccgagcgcatctctctaaacaaaaggatccatgaacacggg
gtacactttaagcgtatgaacgaagacagcctgatgcataccccggagtttgtgattaaa
ccgcgctcccacactgtgtgggagaagcagtgtgtgcggctgcactgcactgtcagcggc
tggccggacccccgggtcgtctggtacaaaaacaatgttgccatcgaccctgttggccat
ggtgacaagtataaacttgagagcaaatacaacatgcactcactggagatcaacagatgt
gatttcgatgacacggcgcagtatcgtgtctctgccatgaactccaagggagagctgtct
tcatttgcctctgtcgttgtaaagaggttcaaaggtgatatggatgagtccctgccatcc
cctagacggggcagtactgaagatggccctgtgtgtgagtacggcgtcaacttccagact
cacattgttgataaatttggtgtgacgtttggaagagagggtgagaccattagtcttgga
tgtacagtcatcatttcccctgccctgcaccgctaccagccagagatccagtggtacaga
gacgatgtccttctgtctccttctaaatggtacaacatgcactggagtggagatcacgcc
acaatgaccctcgcacacctgaacaaagaggacgaggggctctacaccctgcgtgtcacc
accaagtctggatatgaaacctactccgcctacgtctttgtcagagattctgaagctgag
gttgaaagagctcctggggcccctctggatgtgcgctgcctggatgccaacaaggattac
atcatcgtcacctggaagcagccagctgttgatgggggagactccattttgggatacttt
gtggacagatgtgaggttggaaccacccactgggtccagtgcaatgacactccggttaag
tttgcccgtttccccgtcaccggtctggtggagggccgctcctacatgttccgtgtgcgt
gccgtcaaccagaatggcatgagccacccgtccagggtctctgagccggtggctgccatg
gacccctctgaccgcgcccgcattagaggtgcctctgctccttggactggccaaatcatt
gtcacagaggaggagcctgcagagggcattgttcctggcagacctcttgagctgcaggtg
acagaggccaccaagaactatgtcgtgctgagctggaagccccctggcgacaaagggctt
gagggtgtcatgtactatgtggaaaaatgtgttgcgggctcagacacctggcagagggtg
aacactgagatccccgtcaagtctcctcgctttgccctgtttgatctcgctgaggggaat
tcctacagcttccgcgtccgctgctgcaacgctgctggtgtcggcgagccatctgaccca
acggaggcctcaactgttggagacaagcttgatatcccatctgccccaagcaaagttgtc
cctatcagaaacacagacacatccgttgttgtgtcttggcaagcatcgagtgaagctaag
gagttggttggatactacattgaggcgagcgttttggacagcaatgagtgggagccatgc
aacaacaagcctgttaatgttaccaggttcatctgccatggtctgacgacgggagagaaa
tacgtgttcagggtgagggcagtgaacgcagcagggctcagccagttctccccagagtct
gagcctgtggaggtgaaggctgctattgggggcggcatccctcatgcctcccctgctcca
ccctatggcatcactgtcctggagtgtgtatttgactccatggtgctgtcctggaaacag
ccaacattcatcggcggtgctgacatcaccggatacttcgtggattaccgtgaggtcatc
gatggcgtgacagggaagtggcacgaggccaacatcaggtcgatcagcgagagggcctac
agggtgtctgatctgaaggagaagagcaagtatcagttccaggtgcgggcagccaacatg
gcaggtgtcggcatcccttcactgcccagtgacaccttcctgtgcgaggagtggaccatc
gctgtgccagggcctcctcacgacctgcaggtaagagaggtgcgtagcgactctctggtg
ttgctttggaaaccacctgtgtaccagggccgtgatctggtcaacgggttttacatcgac
atcaaggaagcagacgaaccagtggaggcgtggaaaggagtcaacactaaggccacggag
aagacgttcttcaagattaagaatctgaaggaaggggggaattttgtgttccgtgtacgc
gctcagaataaagctggcgttggacaaacctccgaggagacagagccggtcatagctgtc
actaaaccaggcactaaggagatcgtagtggatgttgacgatgacggtatcatctccctg
aatttcgaatgctgtgacacaacccccgactccaaatttgtgtggtccaaggattacgag
gaaatagcagacacatcccgcctgacaatagagaccaagggaaacaaatccaaaactatt
ttcaatactgctgcggaggaggacattggtatttactcatgtattgtcacccacactgat
ggtgcttcatccagctacactctctctgaggaagagttgaagaggctgctggaggtcagt
catgacaacaaattccccgttattcctctgaagtcagagttggctgtggagctgctggag
aagggcaaagttcgcttttggctgcaggcggacaagatgtcagctaacggcaaagtcgat
tacatcttcaatgataaccttatctctcagggggataaatacaagctcaactttgacaag
aacaccggcgtgattgagatgatcatggactctctgactccggctgatgagggcaccttc
accttcaaattgcaggatggaaaggctaccaaccagtccagtttggtactgataggagac
gtgttcaaggagctgcagaaggaatcagagttccagatgaaagaatgggtcagaaagcaa
ggtcctcactttattgagtatttgggttatgaggtgacaccagagtgctgcgttgttctg
aaatgcaaggttggaaacatgaagaaggatacctctgcgctgtggtacaaagacggacac
gagattaaagcagacgagaatctgggattcaccgagggagtgctgaaactggaaattgct
cagatttccaagaaagactctggtgtgtatgaggttgttctgaaggacgacagagggaag
ggcacttccacgttgaatttgaccgataaaggtttcaaagacttgatgaatgaagttttc
agtttcatcgccaattcctccactccgctgaagatcacaagcacagaaaatggcatccga
ctctacacctttgtcagctactataacgatttactccaagtgacatggcactacaaggat
tcggccatctccttctctgaccgcattaagagtggagtggtgggggagcagctgtggctg
cagatctcagagccctcagagaaagacatgggcaaatatgccattgagtttaacgatggg
aaaggtggcctgaggaggaccgtggagctgtctggtcaagcatttgacgatgcttttgca
gaattccagagactcaaagctgctgctattgcagagagaagtcgtgctcgagtagcagga
ggcctgcctgatgtggtcactatccaggagggcaaggccctcaatctcacctgcaacatt
tcgggcgaccccgtgccagaggtcacctggctgaagaacgacagggagatcacgtccgac
gaacactgcattctcaagttcgagtcaggcaagttcgccagcttcatcatcaccggcgtc
aacatctcggactctggcaagtacagcatcctggtgaagaacaagtacggcacggagagc
ggggacttcaccgtggagaccacagatggaacacctgacctgggggtgacgtcatactgg
actgatgcagacggaaatgtagtgtttggcccaaacaccccaaaggagaagatgaacacc
acagtcactggaacgaaaaccccaaagcggaaggaatctgtagctaggaaacttccaatg
gaaaaggttggagacacagacgaggagaaggttgcagttaaacccaaagctacagattcc
aaacaaacaatagatgcaaaggaaaaggttgctgatcagcctttgacttctgaccaatca
gaagcctccgtgaagcctgcaggcaaagtggaggagcccggaccagtatctgaaaaacag
ccagaaaacactgagcagtga
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integrated database retrieval system
