Trematomus bernacchii (emerald rockcod): 117495289
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Entry
117495289 CDS
T09643
Symbol
usp1
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117495289 (usp1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117495289 (usp1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117495289 (usp1)
03400 DNA repair and recombination proteins [BR:
tben03400
]
117495289 (usp1)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117495289 (usp1)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117495289 (usp1)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117495289 (usp1)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
117495289 (usp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117495289
NCBI-ProteinID:
XP_034002359
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MPGPQGEYAAVASPVKKSKLSLKFLQKKEAKRALDFSEPQADEPKPVKQVEPEASSCDQV
VPGPSPCPASPGLLLSSDKRETLVPFVGLNNLGNTCYLNSILQVLYHCPGLREGIKKLYN
LSKSTDKPKEETDQNEEQSEDASEALTPQLELLGSFNSLITSVQQLQSSFLLNPDSFTEG
ELATPPRKILNTLRQLNPMYEGYLQHDAQEVLQCILGYIQEACDTIRKDLKTEESEVKPE
HGVDSAASSTVTEEEDGQVSGKRKSDTEVGNAKKKPKSLKAKTSDAGDNRPLTRSKRKSL
NEITVDNKQDKDEEEKEGTKILNKEEGSDGEGKGDKASKEAEGKRKKKSKLSWLRPSGKQ
PSIFSKFLSVGKISSVKNQSKAEQENAVAEEKRSAEERAGHTAEDKKTAEPQEGLDLMEQ
LFQGCLVLRTRCLECESFTERREDFQDISVPVLDEEPSSPDDLSEVSPDPKPELKTLKWA
IGQFASVERIVGEDKYFCETCHHYTEAERSLLFDKTPEVITIHLKRFSANSCDLDPYAGL
SKVNTPLQTPLTLSLDEWCTRPSSTKGLRYQLFAVVMHSGITISSGHYTAYCRMSELKDV
KLWEQREREEETRVKEEGSDFDDGEVSFSLNARGQRGASLAKTVGKKLLEGGVGLLGGQR
SLTSCDIGSSGKQSEKSSSSGATEGSKRRKPVMGQNTEAGEETSCGGAGATEALHNLLDY
EGKWLLFDDSEVRLFEEQDFLQACSPETSSSSTPYLLFYRRMPEP
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtccgcagggggaatatgctgcggtggcgagccccgtgaagaagagcaaactg
tctctgaagttcctccagaagaaagaagctaaacgggctctggatttctctgaacctcaa
gcagatgagcccaaacccgttaaacaagtggagcctgaagcgagcagctgtgatcaggtg
gtgcccggtccttctccatgtcctgcctcacctggccttctcctgtcgtctgataagagg
gagaccttggtgccatttgtggggctcaacaacctgggcaacacctgctatttgaacagc
atcctacaggtgctgtaccactgcccagggcttagagaaggaataaagaaactgtacaac
ctgtcgaaaagtacggacaaaccaaaggaagaaacggatcaaaatgaagagcagtcagaa
gatgcctctgaggctctaacgcctcagcttgagctcctgggcagcttcaacagtctgatc
acatccgtgcagcagctgcagtccagcttcctgttgaaccccgacagcttcaccgaggga
gagctcgctacaccacctcgcaaaatactcaacacactcaggcagctgaaccccatgtac
gaaggctatcttcagcacgacgcccaggaggtcctgcagtgcatcctgggatatatccaa
gaggcttgtgacaccatcagaaaggatttaaagacggaggaatctgaggtgaaacctgag
cacggtgttgattcagcggccagcagcaccgtgaccgaagaagaggacggccaagtcagc
ggaaagaggaagagcgacaccgaggtgggaaatgccaaaaagaagccgaaatccctcaag
gccaagacatctgatgcaggggataatagacccctcactcgttcgaagaggaagtccttg
aatgaaatcacggtggacaacaaacaagacaaagatgaagaggagaaggaagggacgaag
atactgaacaaggaggaggggagtgacggggaggggaaaggcgacaaggcttcaaaagag
gcagagggaaaaagaaagaagaagtctaagctgagctggctgaggccttctgggaaacaa
cccagtattttctccaagttcctcagcgtggggaagatcagctctgtgaagaaccaaagc
aaagcagagcaggagaacgctgtcgccgaggagaagaggagcgccgaggagagagcagga
cacacggctgaggacaagaagacggctgaacctcaagaggggctggacctgatggagcag
ctgttccagggctgcctggtgctgaggacgcgctgcctggagtgtgagagcttcactgag
aggagagaagacttccaggacatcagcgtccccgtgctggacgaggagcccagcagcccc
gacgacctctctgaggtctctcctgatcccaaaccagagctgaagactctgaagtgggcc
attggtcagtttgcgtcggtggagcgaatcgtcggggaggacaaatacttctgtgagacg
tgtcaccactacaccgaggccgagaggagcctgctgttcgacaaaactcctgaagtcatc
accatccacctgaagcgcttctctgccaacagctgcgatttggacccgtatgctgggctg
tccaaagtgaacacccccctgcagacccccctcaccctgtctctggatgagtggtgcacc
cggccctcgtccactaagggtctgcgctatcagctgttcgctgtggtcatgcacagcggc
atcaccatcagcagtggccattacaccgcctactgccgcatgtctgagctgaaggacgtg
aagctgtgggagcagagagaaagggaggaggagacgagggtgaaggaggaagggtcggac
tttgacgatggagaggtgtctttcagcctgaatgccaggggacagagaggggccagtttg
gctaaaacagtagggaagaagctgttggaggggggggtcgggctcctggggggccagagg
agtctgaccagttgtgacattgggagcagcggcaaacagtcggagaaatcctccagcagt
ggagccacagaggggtccaagcgcaggaaacctgtcatgggacagaacactgaagcagga
gaggagacctcctgtgggggggcgggggccacagaggctctgcacaacctcctggactac
gagggcaaatggctgctgttcgatgactctgaggtgcgcttgtttgaggaacaggacttc
ctgcaggcctgctctccagaaacgtcctcctcctcgaccccctacctgctgttctacagg
aggatgcctgagccctaa
DBGET
integrated database retrieval system
