KEGG   Trematomus bernacchii (emerald rockcod): 117495304
Entry
117495304         CDS       T09643                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tben03032]
    117495304 (rif1)
DNA replication proteins [BR:tben03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    117495304 (rif1)
SSDB
Motif
Pfam: Rif1_N
Other DBs
NCBI-GeneID: 117495304
NCBI-ProteinID: XP_034002384
LinkDB
Position
Unknown
AA seq 2511 aa
MMASAEPPSGSSLLPLLESLEDAAVGQSEKTDAYLTIASRLSGDEGRQFLPAVEKHFPRL
GKSILAHVTGPNAELSQAALQALGFCLYHSHVSAAVPETFAADLLSALCSLVVKGTDKNT
CIRALWVISKQSFPPEMVGKKVSSILGALESVLGREDIQSVVLEHEALNVIIRLLEQVPA
QMGEGALRWARLVIPLVVHSASKVRLRAAAALETGLPLLLEKQTEVAAIIEPMMSTKLIP
ELQKLFVSKNETNVLKLWPLFIKLLGKMLHRGGPFINSLLHLEELGFRSSSPTIKKIAFI
AWKSLIDNFALNPDILCSSKRMKLLMQPLASINVRTEVLMLTKVEVWWYLVVQLGPNLAP
NFDQVSVPLLQCTIGSESSSVPGTPSRPVGQNGAAPPGTPKTGGTPGFNSSANTSRMSLN
SSVHVFCSFPSIQLLGLEMLLHYFLGPEVTAAAAKNKLTLSLEPLNHPLLSGSSSFTKHA
AVLTSNLRDGFINIGKDAPDSLLSVLWTNLVRFVNLSIESAGSKKDRHGGEVLTLMLQAL
QSIVASEALPAAKVLILLEATVKGIPQRVLGSASYQVGKMDVLNGTPALFLVLLLYNSSM
LSAYIEDERFFQCLQTLVGCGLSGPTSPLAFGEAVLGAVRRSAASVQNKEQLWRMWSLVV
SPLTDTITQSNEVNQGDALEHNFSAVHSALLFPVTHLLRGTPLQQAAQKSMLSSWSKLYK
VFARCSALVVTAEENICCEELCVKMAAVMDRDALMVPSTLNAVSSILQVMVECVDFSPYS
PQFQQKLKSPHTPVNWMKKKNKVLGNLSTFQSLLVHCLEVFLEEDSSDATGLALASVMSA
LFTNFSLPNTVTEALNSLVPPLTLFCKQAASEPPKFSSQLQAKLEKLLSDVLGCLQTRST
LAYNDELLALLSPLLCVMFPHKNKQLRTAVAHFWNSSFGNSASLTYPEEIRPILSKVKQK
TPIILPGFEVVDVPDDLSGQYSSDSSQLETKLSGIQVSSVGKRDSLLKAAELQNKRSPKT
SKPVSTKLDFGSPKPPRRGVLDEEASIDFVFIPPETKERVLTEHQKEVKRTKRVDIPAMY
NNLDASLDTTVFTQYTQSQEDSSDKLASEQADKVTDEEATGKVPQEDVETEEDHEVLTKD
TQDYASPKAVDAMPENRIQEDMIPDSRDVSMEDDTISDRAEDLEMQSKEGPSPDISGSSD
LVSGTPQKQNSRRQSFITLEKYAEGKAGSPSSTFTGPLIKTSDSQERSNAKSSSQVSQTS
SSPKPQGSQSSQTGKVKSASPVTDAFESPVRPKDSRKRTEPVKLTVRLAIDPTEDEDVIP
DTQTEGEDKESTKSASSSEETKPSSQEEQSDAALDNSQSSLSETSQSERRRSGRTRVRPL
LPGENPEDKNTLLKRRHSGEEPKSDSSKSSRPNTRSTPVAEEDNGRLRTRAQRDKSESNL
TNSQRKANKKIKLFNNSADFLDEPEPKRRSTRDSSQTDLLADNESQSQGKQRQRSKASME
HKEKKDSADVVEQANEDEEKPKKDSQIITQTSAIPQEMEIEEQTNNDIDSQTVQDGEKLE
KDSQMIASPQIQGQSQESELIEKPNNEKKDSQIIASPSTNDESGDTTSTTEKSVNESEVK
DQLKTREATDDDLSQGDSQVITPSSSESQSRRRSGRSKASSEATGSESKSENKDSLERRS
RSNSQASLTADSQPEARKRGRPKKVKVQEDPSESSPISTPESSQSLDTAKSSQGRGKSVR
RTSEVLPVASTESESQEAKEDPPMPKKRGRKPRLSLPCPLTVESKESQITNDMVKGDSDA
SQKAESQSVEAKADLEDLEESQNSESLQINTEEQGDAESQKEVEVDDVDNAKESQSLTAS
PLKEQTQVTEMTSSQEGDTGDLPSADMPESAGISTEQNQEELPCDPSVEDTLEPSVELIE
KLQVSESSEEKAAEPSEEVAEKQEDGSDSMDQEPPVSAEEPDVVSAEEPDVVSAEEPDVV
SAEEPDVVTAEEPDVVSAEEPDVVTAEDPEFVTAEDPEFVTAEDPEFVTAEDLEFVSAED
LEVVPAEDLEVVPAEDLEVVPAENLEVVPTEDLEVIPAEEEAEDRDTTFVEQVSPECQNV
IDDLSKVEEQSTSSKEGESTYQHTEYTSAESAILERQYEEESRALHSLNDVVANLDAALA
QVSPVKQKDLEALMAADLGQSPSSRTRGTWSPTASPSTSILKKGLKRPLEDETPSPIIKS
RRVSFANPIQHQEIADDIDRRSPALRTSSPRRNKGSCIPQPKYVTTPTKGLLILSPRNLH
SPGYKSSKKCLISEMSKDRPVSKDCIYPALVGCSAPVEAVLPQISSNMWSRGFGQLVRAR
NIKTVGDLSALTPTEIKTLPIRSPKISNVKKALKNYEQQRKGRGFDELKSLDDLEMMTSE
LEETSAPQNQDEDDKTSETLATALIDEPIPADGPMEDDCPKNLTPDTPAGEHTPAGRLQA
EVEALSHSMTPQELNNCSSQQLVQIHDQLSGMTRSIVVELQTRICEKEDKR
NT seq 7536 nt   +upstreamnt  +downstreamnt
atgatggcttcggcggagcctccgagcggctcgagcctcctccccctgctggagtctctg
gaggacgccgctgtgggacagtcggagaagacggacgcctacctcaccatcgcaagtcgg
ctcagtggagacgagggccgacagtttctccctgccgttgaaaagcactttcctcgtttg
ggcaaatccatcttggctcatgtaaccggtccgaatgcagagctgagccaagccgccctg
caggcattaggattttgtttgtatcattctcacgtcagcgctgcagtgcctgaaaccttc
gcagcagacctactttcagcactttgctccctggtggtaaaggggacagataagaacaca
tgcatccgagcattatgggtaatctccaaacagagctttcctccagagatggtgggcaaa
aaggtgtcgtccatactgggagctctggagagcgtgttgggcagagaggacatccagtct
gtggtgctggagcacgaggccttaaacgttatcatcaggttgctggagcaggtcccggct
cagatgggcgagggggcgctgcgctgggcgaggctggtcatcccgctggtggtgcactcc
gcctctaaagtgcgtctccgggcagcagcagccttagagacgggcctccctctgctgctg
gagaaacagaccgaggtggcggccattatcgagcccatgatgtccactaaactgatccca
gagctgcagaagcttttcgtgtccaagaatgaaacaaacgtcctgaagctctggccctta
tttataaaactgctggggaagatgctgcacagaggcggccccttcatcaactctctgctc
cacctggaggagctgggtttccgcagctcgtccccgaccatcaagaagatcgccttcatc
gcctggaagagcctcatcgataactttgctctaaatccagacatcctgtgcagcagtaag
cgtatgaagctcctcatgcagccgctggcctccatcaacgtgcggacggaggtcctgatg
ctcaccaaggtggaggtgtggtggtacctggtggtccaactcgggccaaacctggcaccc
aactttgatcaggtttctgttcctctgctccaatgcaccatcgggtctgagtcctcttca
gtcccaggaactccctctagacctgtgggtcagaacggtgccgccccacctggaactcca
aagaccggcggcactccaggcttcaacagctcggccaacacgtctcggatgagtctgaac
tccagcgtccacgtcttctgcagcttcccctccatccagctgctgggcctggagatgctg
ctacactacttcctgggaccggaggttactgctgcagcggccaagaacaaactcaccctc
agtctcgagcccttgaaccaccctctcctctctggttcttcctctttcactaaacatgcc
gctgtgctcacctccaacctcagagacggattcatcaacatcggcaaagacgctccagat
tctcttctctccgtcttatggacgaatctcgtccggtttgtcaacttatctatagagtcc
gcaggcagtaagaaggatcgtcacggaggggaagtcctgactctgatgctccaggctctg
cagagcatcgtcgcctcagaagctctgccggcagccaaagtgctgattctcctcgaggcc
acagtgaaaggtattcctcagagagttctgggctctgcatcgtatcaggtcggcaagatg
gacgtgctgaatggaacgccggctctgttcctcgtgctcctactctacaacagcagcatg
ctctccgcctacatcgaggacgagaggttcttccagtgcctccagacgctggtgggctgc
gggctgtcgggccccacctcccctctggcgtttggggaggcggtgctgggggccgtgagg
cgcagcgctgcctccgtgcagaacaaggagcagctgtggaggatgtggagcctggtggtc
agcccgctcacagacaccatcacacagtcgaatgaagtcaaccaaggagacgctctggag
cacaacttcagcgccgtgcactctgcgctgctgttccccgtcacacacctgctgcgcggc
accccactacagcaggcggctcagaagtcgatgctgtcctcgtggtccaaactgtacaaa
gtgttcgctcgctgctcagcgctggtggtcacggccgaggagaacatctgctgcgaggag
ctgtgcgtgaagatggccgctgtgatggacagagacgccctgatggttccttccacatta
aatgcagtgtccagtatcctccaggtcatggtggagtgtgtggacttctcgccgtactct
cctcagtttcagcaaaagctaaagtctcctcacactcctgtgaactggatgaagaaaaag
aacaaggttttggggaatctgtccaccttccagtccctgctggtccactgtctggaggtt
tttctggaggaagattcctctgacgccacaggactcgctctggcctccgtcatgtcggct
ctcttcacaaacttcagtctccccaacaccgtcacagaagctctgaactctctggttcct
cctctcactctgttctgcaaacaagcagccagtgagccgcccaaattctcctctcagctg
caggcaaagttggagaagctcctcagcgacgtgctcggctgcctgcagactcgctccacg
ctggcgtacaacgatgaactcctggctcttctctctcctctgctgtgtgtgatgtttcct
cacaagaacaagcagctccgcaccgccgtcgctcacttctggaactccagcttcggaaac
tcagccagcctcacctaccccgaggagatcagaccaatattgagcaaggtgaagcagaag
accccgatcatcctccctggcttcgaggtggtcgatgttcccgatgatctcagtggacag
tattcaagtgacagttcccagttggaaacgaaactcagtggcatccaggtgtcgtctgtg
gggaagagagactctctgctgaaggctgctgagctccagaacaagagatcaccgaaaacc
tccaaacccgtttctacaaagcttgactttggctccccgaagcccccccgcagaggagtt
ttggacgaagaggcctccatcgacttcgtctttattcctcctgagaccaaggagcgagtg
ctgactgagcaccagaaggaggtgaaaaggacaaaaagggtcgacatccctgccatgtac
aacaaccttgatgcctctctggatacgacggtgttcacccagtacacccagagccaagag
gactcttcggacaaactggcatctgaacaagctgacaaggttacagatgaggaggctact
ggcaaggttcctcaggaagatgttgaaacagaggaagaccatgaagttctaaccaaagac
actcaagactatgccagtccaaaagcagtagatgctatgcctgaaaaccgtattcaggaa
gatatgattcctgattccagagatgtttctatggaggacgataccattagtgatagagca
gaagacttggaaatgcagtctaaagaaggcccaagtcctgacatctctggttcttcagat
ttggtctctgggactcctcagaaacaaaacagtcgccgtcagtccttcatcactctggag
aagtatgctgaggggaaagctggtagtcccagcagtactttcacaggtcccctaataaag
acctccgatagccaagaacgctccaacgcaaagtcgtcctctcaggtttcacagacatcc
agtagtcctaaaccccaaggttcccagtcctctcagacagggaaagttaaatcggcgagt
cctgtgactgacgcttttgagtcccctgtaagaccaaaagactctagaaaaagaactgag
ccggtaaagctgactgtgagactggccatcgacccaacagaggacgaagacgttatccct
gacacccagactgaaggggaggacaaagaaagtacaaaaagtgcctcgtcatcagaggaa
acaaaaccctcaagccaggaagagcaatctgatgcggctctagataattctcaatcttct
ctgtcggagacttctcaaagcgaacgaagacgttctgggcgcaccagagtcagacctctg
ctgcctggagagaaccctgaagataaaaacacgctgttgaaaaggcgacattctggagag
gaacctaaaagtgattcttcaaagtcgagcaggccaaacacaagaagtacaccggttgct
gaggaggacaatggcagattacgaacgagggctcagagggacaagagtgagtcgaaccta
accaactctcagagaaaagcaaacaagaagatcaaactgttcaacaattcggcggacttc
cttgatgaacctgaacccaaaaggcgaagcaccagagactccagccaaactgatttgctg
gctgataatgaaagtcagtcacagggtaagcaaaggcagaggagcaaagcatcgatggag
cacaaggagaaaaaggattcggctgacgttgtagaacaggctaatgaggatgaggaaaag
ccaaagaaagattctcaaataatcactcaaactagtgccataccccaagagatggagatt
gaagaacagaccaacaatgacattgattctcagactgtacaagatggtgaaaagctagaa
aaagactctcaaatgatcgcttctcctcaaattcagggccaatcccaagagtccgagctt
atagaaaagcccaacaatgaaaagaaagattctcagataatcgcttctccttcaactaat
gacgagtccggagatacaacgagcacgacagagaagtcggtgaatgaatcggaggttaaa
gaccaacttaagacaagggaagccacagatgatgaccttagtcaaggggactctcaagtg
atcaccccctcatcttctgaaagccagtctcggcgcagatccggaagaagcaaggcatca
tctgaggcaacggggtctgaaagtaaaagtgagaataaggattcattagaaaggcggagc
aggtctaattctcaggcttcactgacagctgacagtcagccggaggccagaaagagaggt
aggcccaaaaaagtcaaagtacaagaggatccctcagagtcgagtcctatctcaacccca
gaaagttctcagtctttagataccgccaagtcctcccaaggcagaggcaaatccgtacgt
agaacttctgaagtgttaccagtcgccagtacagagtctgaaagccaagaggccaaagaa
gatcccccaatgcccaaaaagaggggaaggaaacctcgactgtctcttccatgtcctctc
accgttgaatctaaagaaagccaaattactaacgatatggtcaaaggtgattctgatgct
tctcaaaaggcagaatcacaaagtgtagaagctaaagcagacttggaggacttagaggaa
tctcagaattctgaatcgctccagataaacactgaggagcaaggtgacgcagaatcacag
aaggaggtggaggttgatgatgttgacaacgcaaaggagagccaatcgctcaccgcttca
cctctcaaggagcaaactcaagttactgagatgacctcttcacaggaaggggacactgga
gacttgccctctgctgatatgcctgaatcagctggaatcagtactgaacagaatcaagaa
gagttgccatgtgacccttctgttgaggacacactggagccctctgttgagttgatagaa
aaactccaggtctccgagtcttcagaggagaaagctgctgagcctagtgaggaagttgca
gagaaacaagaggatggttcagattcaatggatcaagaacctccagtttcagccgaggaa
ccggatgtcgtttcagccgaggaaccggatgtcgtttcagccgaggaaccggatgtcgtt
tcagcggaggaaccggatgtcgttacagccgaggaaccggatgtcgtttcagccgaggaa
ccggatgtcgttacagccgaggatccggagttcgttacagccgaggatccggagttcgtt
acagccgaggatccggagttcgttacagccgaggatctggagttcgtttcagccgaggat
ctggaggtcgttccagccgaggatctggaggtcgttccagccgaggatctggaggtcgtt
ccagccgagaatctggaggtcgttccaaccgaggatctggaggtcattccagcggaggaa
gaagctgaagaccgtgacactactttcgttgaacaagtctctcccgagtgtcaaaatgtc
atcgatgatttgtcaaaggttgaagaacagtccacctctagcaaagaaggcgaatcaaca
taccagcacacagagtacaccagtgcagaaagcgccattttagagcgtcagtacgaagag
gaatctcgagccctccacagtttgaacgatgttgtcgcaaatttggatgctgctctggct
caagtttctccagtgaagcagaaggacctggaggctttaatggcggcagatctcggccaa
agcccaagcagcaggaccagaggaacctggtctcctacagcctccccatccacaagtatc
cttaagaagggtctgaagagaccgctcgaggatgagactccctcacccattatcaaatcg
aggcgtgtgtcttttgctaatccgatccaacatcaggaaattgcggacgacattgatcgt
cgcagccctgcgctcagaaccagctccccgagaagaaacaaaggcagctgtatcccacag
ccaaagtatgtcacgactccaacaaagggcctgctgatcctgagtcccagaaatctgcac
agtccaggctacaagagctccaagaaatgcctgatttccgaaatgagcaaggatcgtccc
gtctccaaagactgcatctaccctgctctggtcggctgctcggcgccagtagaagctgtg
ctgccgcagatctcctccaacatgtggtctcggggtttcgggcagctggttcgagccaga
aacatcaaaactgtcggcgacctcagcgctctcactcccactgaaatcaagactttacca
attcgctccccgaagatctccaacgtcaaaaaggcgctaaagaactacgaacaacaacgt
aaaggacgaggctttgatgagttgaagagtttggatgacttggagatgatgacctctgaa
ctggaggagaccagtgctcctcagaaccaggatgaagacgacaagacctcagagacgcta
gctacagcgctgatagacgagccgattcctgctgacggtcccatggaggacgactgcccc
aaaaacctgactcctgacacacctgccggagaacacacacctgcaggacggctgcaggcg
gaggtggaggctctgagccacagcatgacaccacaggaacttaataactgctcctctcag
cagctggtccagatccacgatcagttatcgggcatgacgaggagcatcgtggtcgagctg
cagacgcgaatctgcgaaaaagaagacaaacgctga

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