Trematomus bernacchii (emerald rockcod): 117495313 Help Entry 117495313         CDS       T09643                                  Symbol itgb5 Name (RefSeq) integrin beta-5   KO K06588   integrin beta 5 Organism tben  Trematomus bernacchii (emerald rockcod) Pathway tben04145   Phagosome tben04148   Efferocytosis tben04510   Focal adhesion tben04512   ECM-receptor interaction tben04810   Regulation of actin cytoskeleton tben04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tben00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     117495313 (itgb5)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     117495313 (itgb5)    04148 Efferocytosis     117495313 (itgb5)   09144 Cellular community - eukaryotes    04510 Focal adhesion     117495313 (itgb5)   09142 Cell motility    04820 Cytoskeleton in muscle cells     117495313 (itgb5)    04810 Regulation of actin cytoskeleton     117495313 (itgb5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tben04131]     117495313 (itgb5)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:tben04515]     117495313 (itgb5) Membrane trafficking [BR:tben04131]  Endocytosis   Phagocytosis    Integrins (complement receptors)     117495313 (itgb5) Cell adhesion molecules [BR:tben04515]  Integrins   Integrin beta subunits    117495313 (itgb5) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Integrin_beta Integrin_B_tail EGF_integrin PSI_integrin Integrin_b_cyt EGF_2 I-EGF_1 vWA_SIBA-E EGF_TEN EGF_Teneurin Motif Other DBs NCBI-GeneID:  117495313 NCBI-ProteinID:  XP_034002397 LinkDB All DBs Position Unknown AA seq 803 aa AA seqDB search MWSPGTWMWRAAVCCMLLETFLHTARGLNMCMGGSATSCEECLLIHRSCAWCAQEEFGRG RTLTRCDFSQNLQKRGCDARFIEYPTSSVSVLHNMPLSSKGSGWTQNDVVQIQPQKLSLS LRPGDQTSFELQVRQVEDYPVDLYYLMDLSLSMKDDLETIRNLGTKLALEMGKLTSNFRL GFGSFVDKNMSPFSYTAPKYQENPCNGYKLFPNCVPTFGFRHILSLTDKVDRFNQEVQKQ MVSRNRDAPEGGFDAILQAAVCKEEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPHD GECHLNDKNEYSASTQMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKNFTALIPGTTV EILDTDSKNVIQLIIAAYNNIRSKVELSVWEHPEDISLSFTATCQDGKPLPGLRKCADLK IGDTVSFNVSVEARSCPPRGTEQSFTIKPVGFKDSLQVSVDYQGCDCGCSRTANTNSSIC SNIGTYNCGTCHCEPGYLGARCECQEGESGSSYLSACREAEGKQVCSGRGECSCNQCLCY ESEFGKIYGSYCECDDFSCARHKGILCSGHGECHCGECKCHAGFIGDNCNCSTETSSCIA DDGQMCSGRGSCVCGRCQCSEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLADNQ TCQRLCKDEIITMETLDTEDPGAVLCLYKTENDCVMKFTYSEHASGQSILTALKEPECGG GPDAMVVLLAVVGSILLVGVVLLAVWKLAITVHDRREFSRFQSAGSRARFEMASNPLYKQ PVTTHFVETDFNMYRKSYNGGVH NT seq 2412 nt NT seq  +upstreamnt  +downstreamnt atgtggagcccggggacgtggatgtggagagcggctgtgtgctgcatgcttctggaaaca tttctgcacactgcgagaggtcttaacatgtgtatgggtggcagcgctacttcctgtgaa gaatgcctcctgattcaccgcagttgcgcctggtgcgcacaagaggagtttgggaggggg cggactctgacacgctgtgatttcagtcagaacctgcagaagagaggctgtgacgctcgg ttcatcgagtaccccaccagcagcgtctcggtgctgcacaacatgcctctgagctccaaa gggtccgggtggacccagaacgacgtggttcagattcagcctcagaaactctccctcagc ctgcggccaggagaccagacctcgtttgagctgcaggtgcggcaggtggaggattacccc gtggatctctactacctgatggacctctctctctccatgaaggacgatctggagaccatc cgtaacctgggcaccaagctggccctggagatgggaaagctcaccagcaacttcaggcta ggcttcggctccttcgtggacaaaaacatgtcgcccttctcctacactgctcccaagtac caggagaatccgtgcaatggatacaaactgttccccaactgcgtccccaccttcggtttc cgccacatcctctcgctgacggacaaagtggaccgcttcaaccaggaggtgcagaagcag atggtgtctcgcaaccgcgacgctccggagggcgggttcgacgccatcctgcaggccgcc gtttgtaaggaggagatcggctggaggaaggaggcgtaccacctgctggtgttcgccaca gacgatgttcctcacctggctctggacggacggctggggggcctcgtgcagccccacgac ggggagtgccacctcaacgacaagaacgagtacagcgcctccacacagatggactatccc tctctggctctgctgggggagaaactggccgaaaataatatcttcctcatcttcgccgtg acgaaacgcctctacgttatttacaagaacttcactgcactcatacctggaaccacggta gaaatcctggacacggactctaagaacgtcattcagctgatcatcgcagcgtacaacaat atccgctctaaagtggagctgtcggtgtgggagcacccggaggacatcagcctctcgttc accgccacctgccaggacgggaagccgctgccgggcctcaggaagtgtgccgacctgaag ataggagacactgtatcgtttaacgtgagtgtggaggcgaggagctgccccccccgcggc accgagcagagcttcaccatcaagccggtgggatttaaagacagcctgcaggtctctgtg gattatcaggggtgtgactgtggctgcagccggacggccaacaccaacagcagcatctgc agcaacataggtacctataactgcgggacgtgtcactgtgagccggggtacctgggcgct cgctgcgagtgtcaggagggcgagtcgggtagctcgtacctgagcgcctgtcgcgaggcg gagggcaagcaggtgtgcagcgggcggggcgagtgcagctgcaaccagtgcctctgctac gagtccgagtttgggaagatctacgggagctactgcgagtgtgacgacttctcctgcgcc cgacacaaaggcatcctctgctcaggtcacggtgaatgtcactgcggggagtgtaaatgc cacgcaggcttcatcggggacaactgtaactgctccacggagacgtccagctgcatcgcg gacgacgggcagatgtgcagcggcagagggagctgtgtgtgcggccgctgtcagtgcagc gagccgggggcgttcggagacacctgtgagaagtgccccacctgccccgatgcatgtggc accaagagggagtgtatcgagtgcagactcttcaactctggacggctcgcggataaccag acctgccagcgcctctgcaaggatgaaatcatcaccatggaaacactcgacacggaggac cccggcgcggtgctctgtctctataagacagaaaacgactgtgtcatgaagttcacgtat tctgaacacgccagcggacaatccatcctcaccgctctgaaagaaccagagtgtggtggg ggtccggatgccatggtggtgctgctggcggtggtgggcagcatcctgctggtgggggtg gtgctgctcgccgtgtggaagttggcgatcaccgttcatgaccggagggagttttcacgt ttccagagcgcagggtcacgagcccgcttcgagatggcctccaaccctctgtacaagcag cctgtcacgacacattttgtagaaacagatttcaacatgtacaggaagtcctacaacggg ggggtccactga

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