Trematomus bernacchii (emerald rockcod): 117495417
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Entry
117495417 CDS
T09643
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117495417 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117495417 (rorca)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117495417 (rorca)
Nuclear receptors [BR:
tben03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117495417 (rorca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117495417
NCBI-ProteinID:
XP_034002550
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All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQAQESAGLGVRMENTDMAD
HSRTYRRGSSTTVSDLDDITMLQEGLLFDLPLTPEEAGREYCNLDMLGGSAGSSSSSQSS
PEQTSLDFAEGNHSIKHEYQLLHDSGLFSHAILNPLPEGCSMLEIERITQSVLKSHIETS
HYSTEELKRMAWTLYSPEETRSFQTKSAEVMWQQCAVHITNAIQYVVEFAKHISGFLDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTMLFDGKFATAHLFKALGCDDLVNSVFDLAK
TLSRVQMSEEEMALFSAAVLLSPDRPWLTDVQKIQKLQEKVYVALQRCLQKEGATEQKLA
KMVSKLPILKSICNLHIDKLEFFRLVHPETAYTFPPLYREVFGSEVSFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaggtaataccgtgtaaaatctgtggggacaaatcatccgggatt
cactatggtgtcatcacctgtgaaggctgcaagggatttttccgccgcagccagcagaac
aatgcgatgtactcctgctcgcgacagaggaactgtttaattgacaggaccaaccgtaac
cgctgtcaacactgcaggctgcagaagtgtctcgctctgggcatgagccgtgatgcggta
aagtttggccggatgtccaaaaagcagcgtgacagcctgtacgcagaggtccagaagcac
cagcaggcccaggagagtgcggggctcggagtccgcatggagaataccgacatggccgac
cacagccgcacctacagaagaggctccagcaccacggtcagcgacctggacgacattact
atgctgcaagaaggcctgctcttcgacctgccgctgaccccggaggaagcggggagagag
tactgtaacctggacatgctgggcggcagcgccggcagcagctcctcctctcagagttca
cctgaacagaccagcctggactttgcagaaggcaaccacagcatcaagcatgagtaccag
ctgctgcacgactctggactcttctcacatgctatcctcaacccgctgcctgagggctgc
tccatgctcgagatagagcgtatcactcagagtgtcctgaagtcccacattgagacgagc
cattacagcacagaggagctgaagagaatggcgtggaccctgtatagccccgaggagacc
cgctcattccagaccaagtcagctgaggtgatgtggcaacaatgtgccgttcacatcacc
aatgcaatccagtacgtggtggagtttgccaagcatatctctggcttcctggacctgtgt
cagaacgatcagatcatcctcctcaaagcaggctgcatggacgttcttctgatccgcatg
tgtcgggcctataaccccatcaacaacacaatgctgtttgatggaaagtttgccactgca
catctcttcaaagctcttggctgtgacgatcttgtgaattcagttttcgacctagctaaa
accctgagtcgtgttcagatgtcagaggaagagatggctctcttcagcgctgctgtgctg
ctttctccagaccgcccctggctgacggatgttcagaagatacagaagttgcaggagaaa
gtgtacgtggctctgcagcgctgcctacagaaagagggagcaacagaacagaaactagct
aagatggtgtctaagctacccattctgaagtccatttgcaacctgcacattgacaaactg
gagtttttccgtctggtccaccccgagacagcgtacaccttccctcctctgtacagggag
gtttttggcagtgaagtctccttcccagactccacagagggctaa
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