Trematomus bernacchii (emerald rockcod): 117495424
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Entry
117495424 CDS
T09643
Symbol
colgalt2
Name
(RefSeq) LOW QUALITY PROTEIN: procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00310
Lysine degradation
tben00514
Other types of O-glycan biosynthesis
tben01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117495424 (colgalt2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117495424 (colgalt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tben01003
]
117495424 (colgalt2)
Enzymes [BR:
tben01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117495424 (colgalt2)
Glycosyltransferases [BR:
tben01003
]
O-Glycan biosynthesis
O-linked Gal type
117495424 (colgalt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
117495424
NCBI-ProteinID:
XP_034002560
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MRAVLAGGVAVLCALLVAVLPGCVSELMTVVQEPLRAESSLLKPKVMIAIVARNAAHSLP
HYLGCIERLEYPKERIAIWAATDHNVDNTTSMLKEWLKRAQGVYHYVEWRPMDEPKSYTD
EWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFVDSDNLLTNPHVLNLMMAENLTLA
APMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCYSVPMVHSTFLIDLRRESSK
DLTFYPPHADYSWAFDDIMVFAFSARQAGVQMYVCNREHYGLLPVPLKAQQSVEDESESF
IHTITEALIDHDIEPSEHLHSQPSPQITMGFDKIILVNLKRRLDRRTRMLKTMSSLGLHT
VLEEAVDGKALNSSQLQALGIEMMPGYKDPYSGRVLTRGEIGCFLSHYSIWKQVVEKGIP
KVLVLEDDVRFEPRFKRRIQSIMDDVDKTQLDWDLIYVGRKRMQVQQPEQSVDGVNNLVK
ADYSYWTLGYALSLQGAKKLLDAKPLSKMLPVDEYLPVMFNKHPNTAFMTHFEPRDLKAF
SVEPLLIYPTHYTGEPGYFSDTETSTIWDDEAVETDWDRQHALKTAQQGSIEAMAQNSVS
GDCPPPAARASRDEL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcggtcttggccgggggagtcgctgtgctgtgcgcgctgctggtcgcggtgctg
cccggctgtgtgtccgagctgatgacggtggtgcaggagccgctcagagccgagtcttcc
ctgctgaagccaaaggttatgatcgccattgtggctcgcaacgcggcgcacagcctgcca
cattacctgggctgcatcgagagactggagtacccgaaggagcgcatagcgatctgggca
gcaacagaccataatgtggacaacactacttcaatgttgaaagaatggctgaaaagagcc
cagggtgtctatcactacgtggagtggcgaccgatggacgagccaaaatcatacacagat
gagtggggtccgaagcattggcctccgtcacggttcaaccatgtgatgaagctgaggcag
gcggcgctgaaggctgccagggaacgatgggctgactacatactctttgtagacagtgac
aacctgttgacaaacccccatgtgctgaacctgatgatggctgaaaacctgacgctggct
gcccccatgttagagtctcgctcgctctactccaacttctggtgcggcatcaccccacag
ggatactacaagcggaccccggactaccagcctatcagggagtggaagcgtctcggctgc
tactctgttcccatggtgcacagcaccttcctaatagacctgcgtcgtgagtccagcaag
gatctgactttctaccccccccacgccgactacagctgggcgtttgatgacatcatggtg
tttgctttctctgctcgtcaagcaggcgtgcagatgtatgtgtgtaacagagaacactac
ggtctgctgcccgtccctctcaaagcacagcagagtgtggaggatgagagcgagagtttc
atacacaccatcacggaggctttgattgaccacgacattgagccctctgagcacctgcac
tctcagccgtcgccacagatcaccatgggctttgataaaattatcctggttaacctgaag
cgccggctggacagaagaaccaggatgttgaaaacaatgtcttcgctgggtttacacacc
gtgctggaagaagccgtggacggcaaggctctcaattcatcccagcttcaggcgctagga
atagagatgatgccgggctacaaagacccttactctggtcgagtcctgaccagaggggag
atcgggtgcttcctcagccattactctatatggaagcaggtggtggagaagggcatccca
aaagttcttgttttagaggacgatgtgaggtttgaacctagatttaaacgacgaatccag
tccatcatggatgacgtagacaaaacccagctggactgggacctcatctacgtgggccgt
aagcgtatgcaggtgcagcagccggagcagtctgtggacggcgtgaacaacctggtgaag
gccgactactcctattggacgctcggctacgcgctctcactgcaaggagccaagaagtta
ctggatgctaaacccttgtcgaagatgctgcctgtcgacgagtacctccctgtcatgttc
aacaaacaccccaacactgcgttcatgactcacttcgagcctcgggacctgaaggccttc
tccgtggagccgctgctcatctaccccacgcactacaccggagagccgggctacttcagc
gacacggagacctccaccatctgggacgacgaggcagtggaaacagactgggaccggcag
cacgccctcaagacggcccagcagggcagcatcgaggccatggctcagaacagcgtcagc
ggagactgccccccccccgcagcccgagcatcccgagacgaactctga
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