Trematomus bernacchii (emerald rockcod): 117495449
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Entry
117495449 CDS
T09643
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117495449 (mindy4)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117495449 (mindy4)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
117495449 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
117495449
NCBI-ProteinID:
XP_034002592
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MVVSVEEVASSVVREYLNRKGLKRTIACMDEEHPRTKASINNRSHLRQILHMEGLYSNNK
AQNSPLKTLLEIIVKHHFEGLKQDKIPSNESDPRLSDQAKSWTSNSPAVTPTVMNNKNTE
DSTTAFVISKHNMLRSYRGDFCTSQPETDPLSSHYQTGFWAYDLEEQKDQPMRASLHDNE
RLTRSETEKQISITESTQRSRSNRIRRGMMAGPIASTAQDSNRKRQNRKLEGPHPLLKEV
EDNRQSVDGALVAGKHKKSPESSQIHSADCVEGQWEMWSAPERLPRENSFEKVQQDVRKT
TKVKSLSSPNVADLDVSEMVLDDIDDDEDLGELSKVSFHRTVAEHSHAGYPSHAGYPMDQ
HTAMELKAVLLGTSLNCFSVEWRNQGLTFSETHDLRYGIVQKKGGPCGVLASFQAFVLKK
LLFENTESSSIGLQRLRPSNSTRRKCLVLAAAEILWRAGEEKQAIVAINSGRNHFTPAGH
YKSEGVLEKITCFTLDNFKDLQLLLERHIDQFETGALGCLLLSISAVLSRTITKVREDMD
VHTNTLIGAHGYCTQELVNLLLCGRAVSNVFDNDIELDSGNGNMTLLKGVKEHCDVGLLS
LFEHYNICKVGAYLKTPHYPIWVVCSESHFSVLFGLQRELLTNQDKGLEFDLYYYDGLAN
QQEEIRLTVFVGKSALSYQDVDTDLIPPLEHCIRTRWKDAFVNWNDTEPIL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtttcagttgaagaggtggcttcgtccgttgtacgagagtatctgaaccgaaag
ggtctcaagaggacgattgcctgtatggacgaagaacatcctcgcacaaaggcgagtatc
aacaacagatcccacttgaggcagattctacacatggaggggctctatagtaataataaa
gctcagaactcccccttgaaaacattactggagattattgtgaagcatcattttgagggg
cttaagcaggacaagatccccagcaatgaaagtgatccccgtctgtctgatcaggctaag
agctggacttctaattctcctgcagtaacaccaacagtaatgaataacaaaaacacagag
gacagcacaacagcttttgttattagcaaacacaacatgttaaggtcttatagaggagac
ttctgcacttctcagcctgaaacagacccactgtccagccactatcaaacaggcttctgg
gcctatgacctagaagaacaaaaagaccagccaatgagggcttcgctccacgacaatgaa
cgcctcaccagaagtgaaacagagaaacagatttcaattactgagagcacccaaaggagc
agaagtaatcgaattagacgtggaatgatggccgggccaatagctagcacagcgcaggat
tcaaacagaaaaaggcagaatcgaaagctcgaagggccccatccgctgctaaaagaagtt
gaagacaacaggcagtctgtggatggggctttagtggctgggaaacataaaaaaagccca
gaaagcagccaaatacactcagctgactgtgttgaagggcaatgggagatgtggagtgca
ccagagagattgccgagggagaacagctttgaaaaagtgcaacaagacgtacggaagact
acaaaagtgaagtctttgtccagtccaaatgtggcagatttggatgtgtctgagatggtt
ttagatgacattgatgatgatgaggatctgggagaactctccaaagtgtcctttcaccga
actgtcgcagagcacagccatgcaggctaccccagccatgcaggctaccccatggaccaa
cacaccgccatggaattgaaagctgttcttctgggtaccagcctaaattgtttcagtgtt
gaatggagaaatcagggtctcacgttctcagaaacacatgacctgagatacggaatcgtg
cagaaaaagggtggtccttgtggagtactggcatccttccaagcctttgttctaaagaaa
ctgctctttgaaaacactgagagcagcagtataggccttcagaggttaagaccttccaat
tctaccagaagaaagtgtcttgttttagcggcggcggaaatactttggcgggctggcgag
gaaaaacaagccatagttgcaataaattcaggaaggaatcatttcaccccggcaggacac
tacaaatctgaaggagtgcttgaaaagataacatgtttcactctggataacttcaaggac
ctgcagttgcttctggagcggcatattgatcagtttgagactggggcattaggatgcctt
ctgctcagcatatctgctgttctctctcgaaccattacaaaagtaagagaggatatggac
gtgcacaccaacacactcattggagcccatggctactgcacacaggagctggtaaatctg
ttgctctgcggcagggcagtttctaatgtctttgacaatgacatagagctggattcaggc
aacggcaacatgactctactgaagggagtaaaagagcactgtgacgtaggcctgctgtcc
ctgtttgaacactataacatctgtaaggtgggagcttacctaaagactccccattaccct
atctgggtggtgtgcagtgaaagccacttcagcgtgctgttcggcctgcagagggagctg
ttgaccaatcaggacaaaggcctggagtttgacctctactattacgatggactggccaat
caacaggaggagatccgcctcactgtctttgttggcaaatcggccctcagctatcaagat
gtcgacactgatctcattcctccgctggagcactgcatccgaacaaggtggaaagatgca
tttgtcaactggaacgacacagagcctattctctga
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