Trematomus bernacchii (emerald rockcod): 117495465
Help
Entry
117495465 CDS
T09643
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04217
Necroptosis
tben04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117495465
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117495465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117495465
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117495465
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117495465
Multi subunit type E3
LUBAC complex
117495465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
ANCHR-like_BBOX
Zn_ribbon_RanBP
zf-B_box
Motif
Other DBs
NCBI-GeneID:
117495465
NCBI-ProteinID:
XP_034002616
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MSGGPASVQMDEVRIRSQSLLSASGVAQDVKAEVQTMATIALPLSEKYRHIGVEAILKEN
TACRNKQEVLESLSRLIKAFSILEKYGCNLTSPARPKYWRSVKHNNPVFRTTVDAVKGGR
RILFLYGYTNQQFDGLSFPDEVDGPDTAKVASVTLEVMTLRTEVDMVIKGTHPHIEHFKD
IIPFIIQDNLVNDAVVIPPAEEQQVLALPLKPTPVLVAQPPTPSTGSTPASNCNLCGATS
TLFCPSCDNQSFCDACDGLFHRHPSRATHKRDKIQKTRQEACTICGSSAHAACSTCDQRL
CENCDKLFHSHPDRIGHHRSIITPSKTSSLSLSPWECAHCTTVNEMRAVLCSTCERPRLS
TAASIALESPMLVPTSPSTDWQCKSCTVVNQGSSILCEVCERPRLATRPPVASLLSSLGS
LSSPGSLVSPGSLVSPGSLSESGTKSVSQWMCEFCTYVNTHPVVVCEMCNLSGKDSAQPA
ASSPKEKPQVGVKPQPKPRVNLDAKRQKMMRDDGLYLLQQIREAEKRDISAEEVYAAIGL
CGGSNTNPCDWLTSELPHLLDQICAMAASVQQPAEKKVGEEQEEQEEEEHGGQSVAGEGV
KLSRAEAKLAWLSAGGDIDKAVRQLLRDRRAKMKELHSLGFRDALQCEEALRLSGGEVKG
ALSLLQRPLLEPFHQRIWANQVEPPIDPSDPDKQRMCRRLLALYELPSWGRCELVLSLLQ
EPDATYTLDDVVQAVKESQDKDFIRRVLKNECPCCLSSFPRSKMQSLTSCQCSVCHECFG
SYFNITVRDKHIRDMVCPICSEPDINDPEQLDSYFSTLDIQLRGCLEPGVYDMFHKKLTE
HALMKDPKFLWCCHCTSGFINDGDQLKVTCPHCNKSLCARCKKAWEPQHQDLSCEQFQQW
KRDNDPEYQRQGLAGFLRDNGITCPQCKFQYALTRGGCMHFSCSQCRYQFCSGCNNPYHK
TICKTPRCNYNGLHAHHPRDCLFYLRDWEPPRLQALLQKRAVEFNTDPSNGAQTDACGVM
EQKDEAGQQIDSPCGHQTQPGQAGLCERHYREYLVSLINAHSLDPALLYDTPELIRACER
HQVDEQKGENEDDNVYQIRLIKKLMDVPLGEKVPRNK
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtggtcctgcatcggtccagatggacgaggtcaggatcagatcccagtccctc
ctctccgcctcaggtgtggcccaggatgtgaaggcggaggtccaaaccatggccaccatc
gccctgcctctgtcagagaagtaccggcacattggagtggaggccatcttgaaggagaac
acagcgtgccgcaacaaacaggaggttctggagtccttgagtagactgatcaaggccttc
agtatcctggagaagtacggctgtaatctgaccagtcctgctaggcccaaatactggagg
agcgtcaagcacaataaccctgtcttcagaaccactgtggatgccgttaaaggaggccgg
agaatcttgtttctctacggttacaccaaccagcagttcgacggcctcagtttcccagat
gaagtcgatggaccagacactgctaaagttgcttcggtgacgctggaggtcatgacctta
cgcacagaggtggacatggtcataaagggcacacatcctcacatagaacacttcaaagat
atcatcccattcatcatccaggataatctggtgaatgatgctgtggtgatcccgcctgca
gaggagcagcaggttctggctcttcctctcaaacccactccagtcctcgtagcacaacct
ccaacaccatcaacaggctctactccagcgagtaactgtaacctgtgtggtgccacatca
actctgttttgcccgtcttgtgacaatcaatctttctgcgatgcgtgcgatggcctcttt
caccgccacccttccagagccactcacaagagagacaaaatacagaaaaccagacaggag
gcctgcaccatctgtgggtcttctgctcacgctgcgtgctccacctgcgaccagaggctg
tgtgagaactgtgacaagctgttccactctcaccccgaccgcataggacatcacagaagt
attattacaccatctaaaacatccagtctctctctgtccccttgggagtgtgctcactgc
accacagtgaacgagatgcgagctgtgctctgctccacctgcgagcgcccgcgcctctct
acagctgcatccatcgctctagagagccccatgttggtccctacatctcccagcacagat
tggcagtgtaagagctgcacagttgtgaatcagggcagcagcatcctgtgtgaggtgtgt
gagcgcccccgtctggccactcgcccgcctgtcgcctcacttctgtccagcctaggatct
ctgtccagcccagggtctctggtcagcccagggtctctggtcagcccagggtctctgtcc
gagtctgggacaaagtctgtttcacagtggatgtgcgagttctgcacctacgtcaacaca
catcccgtcgtggtgtgtgagatgtgcaacctgtcaggtaaagactcagcccagccggct
gcgtccagccccaaagaaaaaccccaggtgggagtaaagcctcaacccaagcccagagtc
aacctggatgccaaaagacagaagatgatgagagacgacggcctctatctcctccagcag
atcagagaagcagaaaagcgcgacatcagtgctgaggaggtgtacgcagccatcggcctg
tgcggcggcagcaacaccaacccctgtgattggctgacgtcagagctgcctcacttgctg
gatcaaatctgcgccatggctgcttccgttcagcaacccgcggagaagaaagtgggtgag
gagcaggaggagcaggaggaggaggagcacggcgggcagagcgtcgcaggtgaaggtgtg
aagctgtccagagccgaggccaagctggcctggctgtctgcaggcggagacatagacaag
gctgtgagacagctgctgagagacagacgagccaagatgaaggagctgcactctctgggc
ttcagagatgcgctgcagtgtgaggaggccctgcggctgagtggaggagaggtgaagggg
gctctgtctctgctgcagcgccccctgctggagcctttccaccagcgaatctgggccaac
caggtcgagccgccaatagatccttcagacccggacaaacagaggatgtgcaggcgtctg
ctggcgttgtacgagttgcccagctgggggcgctgtgagctggtcctctcgctgctgcag
gagcccgacgccacctacactctggatgacgtggtgcaggccgtgaaggagtcccaagac
aaggacttcatcaggcgtgtcctcaagaacgaatgcccctgctgtctgagcagcttcccc
cgcagcaagatgcagtccctgacttcctgtcagtgctccgtgtgccacgaatgcttcggg
tcctacttcaacatcaccgtgagagacaaacacatcagagacatggtgtgtcccatctgc
agcgagccggacatcaacgaccccgaacagctggacagttacttttccacactggacata
cagctgcggggctgccttgagccaggagtgtacgatatgttccataaaaaactgactgag
cacgcgctgatgaaagacccaaagttcctctggtgctgtcattgcacctctgggtttatc
aatgatggagaccagctgaaggtcacctgccctcattgcaacaagagtctgtgcgctcgc
tgcaagaaagcttgggagccccagcaccaggatctgtcctgtgagcagttccagcagtgg
aagagggacaatgaccccgagtaccagaggcagggcctggccgggttcctgagggacaac
ggcatcacctgtcctcaatgcaagttccagtacgctctgaccagaggcggctgcatgcac
ttcagctgctcccagtgcaggtaccagttctgcagcggctgcaacaacccctaccacaag
acaatttgtaaaacgccccgttgcaattacaacggcctgcatgctcatcacccccgggac
tgtctgttctacctcagagactgggaacccccccgactgcaggccctgctgcagaagcgc
gctgtggagttcaacacagatccctctaatggagctcaaactgatgcgtgtggtgtgatg
gagcagaaggatgaagcagggcagcagattgattccccgtgtggacaccagactcagccg
gggcaggccggactctgcgagagacactacagggagtacctggtgagcctgatcaacgct
cactctctggaccccgcgctgctctacgatactccggagctcattcgagcctgtgagaga
caccaggtggacgagcagaagggagagaacgaggacgataatgtctaccagattcgactt
attaagaaactgatggatgtccctcttggtgaaaaagttccaagaaacaaataa
DBGET
integrated database retrieval system
