Trematomus bernacchii (emerald rockcod): 117495481
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Entry
117495481 CDS
T09643
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117495481 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117495481 (rubcn)
Membrane trafficking [BR:
tben04131
]
Autophagy
Other autophagy associated proteins
Others
117495481 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
LRRFIP
RecO_C
CMD
Motif
Other DBs
NCBI-GeneID:
117495481
NCBI-ProteinID:
XP_034002645
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MEISEEEEAEERRKEQWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNNILSHGL
KNEQVYYKQRDYWPFVWCVRYISPHLASHVEQFGHLEPVLSSGMRNAGESYKAERWLLHS
LQVHMLSAQLRPLLRHMGHTSKYYNGHAFLLSEPHVTATFQCLEAVEQNNPKLLAQVDTF
GLSPLKGPTCLGLLKSHSLCVLPGAGAAWRNADSAPRGESLNRRLTTSNCSLREAVDTSH
NSGSTTGVGPQSSNSTNPTSSSTGAPWLCVSRPGESERGVTPPLGPSSIPGTSLTESPSP
ASFQPDAGDSCDCDYDDGPEYLAIGNLGQRSRCESQSFTHSSEVDFTPDLSMQRGLLAPP
SPRRSSFSEGQKGPGRGSRGHIRSLSDTGINQKLRNESAGQDCCIKNYSPFSPQRKDVST
PSSLYMESHGSQCSIVSDGMFRKPSEGQSLISYLSEQDFGSCADLEKENAHFSISESLIA
AIELMKYNLRRQQEAGEEEGDSDNEIQQLKQKIRLRRQQIRHSRLPPCANSQQLFHSTDS
GGSRRSSQDSYQGLSDSGSAEEVEECELQDGCEGQSLLAASQNGLSLSLASLFSDADIKR
SMSSSNRSFLSSESISPAFLQSNSAESVAMGLLRQFEGMQLPAASELDWLVPEHDAPQKL
LPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHPAPKRKIVVAKQNYRC
AGCGTRIDPDYIKRLRYCEYLGRYFCQCCHENAQAVVPGRVLRKWDFSKYYVSNFARDLL
SKIAGDPLFNPNDINSGLYKKNKALEVVRVLRVQLFHMKNLFKTCRFAKEVLDQFDSLPG
HLTEDLHLFSLNDLSAVRNGDLAPRMKELLKHGTSHAAGCVLCQAKGFVCEFCGNEKDII
FPFQLNKCQRCEECHACYHRNCFRTGKDCPRCQRLAERRERLARKNMEEQEDEGGGP
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggagatatcggaggaggaagaggcggaggagcgcaggaaggagcaatggaagctactg
tccagcctgaagaccacagtggagggtctcgtgtctaccaacaatcccaacgtgtggtca
cgttacggtggcctacaacgactccacaaggacatgaacaacatcctgagccatggactg
aagaatgagcaggtgtactacaagcagagagactactggccgtttgtgtggtgtgttcgc
tacatcagcccccacctcgcctcgcacgttgaacagttcggtcacctggagccggtgctg
agcagcgggatgaggaatgctggggagagctacaaggccgagcggtggctccttcacagc
ttacaggttcacatgctgtctgctcagctcagacctctgctccggcatatgggacatacg
agtaaatactataatggtcatgcctttctgctgagtgagcctcatgtgaccgccacgttc
cagtgtctggaagccgtggagcagaataaccccaaactgcttgcccaagtagacaccttt
gggctgtcccctctgaagggcccaacctgtctgggcctattgaagagccacagcctgtgt
gtattgcctggagctggtgcagcttggagaaacgcagactcggctcccagaggagaatct
ctaaatcgcagactcaccacttccaactgctcgctccgagaagcagtcgataccagccac
aactctgggagcactacgggagtcggaccccaaagcagcaatagcacaaaccctacctcc
agcagcacgggggctccctggttgtgtgtgtcccggccgggggagagcgagcgaggggtg
acgccacctcttggccctagttcgatccctggcacctccctcacagagtccccctcgccc
gcctcctttcagcccgatgccggggactcctgtgactgtgactatgacgacggtccggag
tatctggctatcggtaacctggggcaacgcagccgctgtgaatcccaaagcttcacccac
agcagcgaggtggactttaccccggacctgtccatgcaacggggtcttctagccccgccc
tcaccgagacgctcctctttctcagagggtcagaaggggccgggccgggggtcccgagga
cacatccgctccttatctgacacagggatcaatcagaaactcaggaatgaatcggcaggg
caggactgctgtataaagaactacagccctttctcacctcagcgcaaggatgtcagcact
cctagttccctctacatggagtcccatgggtcccagtgcagcattgtttctgatgggatg
ttcaggaagccgtcggagggtcagagcctcatcagctacctgtcggagcaggactttggc
agctgtgctgacctggagaaggagaacgctcatttcagcatctcagagtccctaattgct
gccatcgagctgatgaagtacaacctgcggcgtcagcaggaggcgggggaggaggaggga
gacagcgacaatgagatccagcagctcaaacagaagatccgcctgcgcaggcagcagatc
cgacacagccgcctgccgccctgcgcaaactcccagcagcttttccactccactgacagc
gggggctccaggcggagctctcaggactcgtaccagggcctctctgactccggctcagca
gaggaggtggaggagtgcgaactgcaagatggctgtgagggtcagtccctgctggcggca
tctcagaacggcctctccctgtccctcgcctcactcttctcagatgcagacattaagcgc
agcatgagctccagcaacaggtcgtttctcagctcagagtccatctctcccgccttcctc
cagtctaactcagcggagtcagtagccatgggtttactccggcagtttgagggcatgcag
ctccctgcggcctccgagctcgactggctggtcccagaacacgacgctccgcagaagctg
ctgcccatccccgactctctgcccatctctcctgatgatggcgaacacgcagacatctac
aagctgaggatcagggtgaggggcaacctggagtgggcccctccccgaccgcagatcata
ttcaacattcatcccgcccccaagaggaagatagttgtggctaaacagaactaccgctgc
gccggctgtggcactcgcatcgacccagattatatcaagcgcctgcgttactgtgaatac
ctcggccgttacttctgccagtgttgccatgagaacgcccaggcggttgttcccggccga
gtgttgaggaagtgggacttcagcaagtactatgtcagcaacttcgcccgggacctgctg
agcaagatcgcaggagaccctctgttcaaccccaatgacatcaacagtggcctgtacaag
aagaacaaagctctggaggtcgtcagggttttgagggtgcagctgtttcacatgaaaaat
ctcttcaagacctgtcgcttcgctaaagaggtgctggaccagttcgacagccttccaggt
cacctcactgaagacctgcacctcttctccctcaatgacctctctgctgtacgcaacggg
gacctggctccacgaatgaaagagctgctgaaacatggcacatcgcacgcagctggctgt
gtgctgtgccaggcgaagggcttcgtgtgcgagttctgcggtaacgagaaggacatcatc
ttccccttccagctgaacaagtgccagcgctgtgaagagtgccatgcgtgctatcatcga
aactgcttccggacaggtaaagactgtcctcgatgtcagcggctggcagagcggagggag
aggctggcacgtaaaaacatggaggaacaagaagatgagggaggtgggccttag
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