KEGG   Trematomus bernacchii (emerald rockcod): 117495537
Entry
117495537         CDS       T09643                                 
Name
(RefSeq) ras-related protein Rab-5C-like
  KO
K07888  Ras-related protein Rab-5B
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04137  Mitophagy - animal
tben04144  Endocytosis
tben04145  Phagosome
tben04148  Efferocytosis
tben05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117495537
   04145 Phagosome
    117495537
   04137 Mitophagy - animal
    117495537
   04148 Efferocytosis
    117495537
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117495537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tben04131]
    117495537
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117495537
   04031 GTP-binding proteins [BR:tben04031]
    117495537
Membrane trafficking [BR:tben04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    117495537
 Endosome - Lysosome transport
    117495537
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117495537
  Exosomal proteins of other body fluids (saliva and urine)
   117495537
  Exosomal proteins of colorectal cancer cells
   117495537
  Exosomal proteins of melanoma cells
   117495537
GTP-binding proteins [BR:tben04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    117495537
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU SDR-like Gtr1_RagA RsgA_GTPase B12-binding Tfb2_C DUF5793
Other DBs
NCBI-GeneID: 117495537
NCBI-ProteinID: XP_034002704
LinkDB
Position
Unknown
AA seq 173 aa
MLKFVFMQPLNNAAFLAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDI
TKPDTFERAKAWVKELQRQASPNIVIALAGNKADLAERRLVEYEDAQTYAEDTGLLFMET
SAKTAMNVNELFLAIAKKMPKTDTQNPTHAARHRGVNLQDPDAHSNRACCGGN
NT seq 522 nt   +upstreamnt  +downstreamnt
atgctcaaattcgtgttcatgcagcccctaaataatgcggcgttcctggctcagtcggtg
tgtttagacgacaccacggtgaagtttgagatctgggacacggcgggacaggagcgctac
cacagcctcgcccccatgtactacagaggagctcaggccgccatcgtggtcttcgacatc
accaagccggacacctttgagcgagcgaaggcctgggtgaaggagctgcagaggcaggcc
agtcccaacatcgtgatcgctctggctgggaacaaggcggacctggcagagaggagacta
gtggagtacgaggacgcccagacgtacgctgaagacaccggcttgctcttcatggagacc
tctgctaaaacagccatgaacgtcaatgagctcttcctggctattgcaaaaaagatgcca
aaaacagacacccagaaccccacacatgcagcgcgacaccggggagtgaacctccaggat
ccggacgcccactccaaccgagcctgctgcggggggaactaa

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