Trematomus bernacchii (emerald rockcod): 117495551
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Entry
117495551 CDS
T09643
Name
(RefSeq) deoxyribonuclease-2-alpha-like isoform X1
KO
K01158
deoxyribonuclease II [EC:
3.1.22.1
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04142
Lysosome
tben04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117495551
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
117495551
Enzymes [BR:
tben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.22 Endodeoxyribonucleases producing 3'-phosphomonoesters
3.1.22.1 deoxyribonuclease II
117495551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNase_II
Motif
Other DBs
NCBI-GeneID:
117495551
NCBI-ProteinID:
XP_034002722
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MAGYRTMMGLLLTVGIVFQLSESRVTCRNDEGNEVDWYILYKLPLGHSDNGLSYLYMDES
TDGWKLSKHTIDSSSGTLANTLEPLLDYYVRKTEGFGYILYNDQLEKKTVSSSYGHSKGV
VMLDRATGVWLSHSTPKFPTDQSKSFWPESGNVNGQTFLCVTYSYGTFKEIGLQLMYIHP
YAYDYVIPKTFHMELQKVALKTGYPGKEPFSSVTFLRSEGGEFFHSFAKYTRFNDDLYSG
LIVDDMEENLYVKGWGNKGRSVLLPSDCSTPHHHVYNVKKVKLLETVYNDTQDHSKWCVA
PISGWTCIADLNRHESQKYRGGGAICIKDVAVAKAFWTTIKTYV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggctggatatagaacaatgatggggttgctcttgactgttgggattgtttttcaactg
tcagagtcacgtgtgacatgcaggaatgatgaaggaaacgaggtggactggtatattctg
tacaagttgcccctggggcattccgataacggtttgtcctatctgtacatggatgagagc
accgatggatggaaactcagcaaacataccattgacagttcatctggcactcttgcaaac
accctggaacctcttttggactactacgtcagaaagactgaaggttttggatacatttta
tataatgatcaacttgaaaaaaaaacagtttcttcatcatatggacacagtaaaggtgtt
gtgatgttggacagagcaacaggagtctggctctcacactctacaccgaaatttccaaca
gatcaaagtaaaagcttctggccagaaagtggaaacgttaatggtcagacatttttgtgt
gtgacttactcctatggtacatttaaagaaataggattacagctcatgtacattcatccc
tatgcatatgactatgtcatcccgaaaacctttcacatggagctgcaaaaggttgcactg
aaaactggttacccaggaaaagaacccttttctagtgtgacatttctgagatcagaagga
ggagaatttttccacagctttgcaaaatacacacgttttaatgatgatctttattctggc
cttattgtggatgatatggaggagaatctgtacgtgaaaggctggggaaacaagggtcgc
tcagttctgctgccgtctgactgcagcacaccgcatcatcatgtgtacaacgtaaagaag
gttaaactcctggaaacggtctacaatgatactcaagatcactccaagtggtgtgtggct
cctattagtggatggacctgcattgctgatttgaacaggcatgagagtcagaagtataga
ggtggaggagcaatatgcattaaagacgttgcagttgcaaaagctttctggaccacaatc
aaaacttatgtatga
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