Trematomus bernacchii (emerald rockcod): 117495607
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Entry
117495607 CDS
T09643
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117495607 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117495607 (tprb)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117495607 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
117495607
NCBI-ProteinID:
XP_034002845
LinkDB
All DBs
Position
Unknown
AA seq
2378 aa
AA seq
DB search
MAALLLQELEPSEISKLPKTVQNKLEKVFSDQQYEIDSLKAQQEQFRVDSEQHFFEKVKQ
LAQCQEKCLSTTQEHLKLKDEFAKQVEDVKSLREKNREYESSQERLSSEQTLLSKAKEEL
EAEKRELLRTLEKRSLQVEHLNDDFRQLNDKLAEVNTSKMALQMKLDELESAEVNIKYKE
KRMEQEKVLLNGQTSWLNGELKAKSEELLSLSRQKGNDILELKCNLENKEDELNRLKDQV
ASLKSSNEQLQKQNEDMISKLREAKEQQATMEEKYRNELNANIKLSNLYKGAAADSEAKS
DELTLAVEELHKLLKDAGEANKALEEKLQDMNGATDKSVAELKERIQVLEKELDNTNELL
SSSTLRGPISSASVISEEQLTTMSPTAAAVSKIKPGMRLTELYTAYLESQEHLQLERLEN
KRVNKYLDDIVQEVEAKAPILKRQRDEHERMQKSVTSLSAKLEHAVMEVHRLQKEADEAN
KRSSVLERDNQRSELQLGDMAQQVRVLLIELEEARGNYVPHEDDGSSADVSSTSEVISQH
LVTFRGVEELQKQNQRLLVALRELSEAQEKEEIETSGSKRGELEQSLGKAQVELESLREQ
RGQQIKMTESIVRQRDMYRVLLAQATGVSFPQQGTPPEDFSLTSTPGRSPAAIPTSGTPT
ALVSMTTDSTEALEAKAALRQLQEVFSTYKKERMESDKAVTGQGEKLQEQLSNLHSQNAK
ISTQLEFASKRYEMLQDNVERYRKEIASLREKEQKTAAAAQKHEQTIHSLNEDLRAAKEK
LSMAEGHVQSMRKERDMLKLVESRLNQEKESLQSQQQSQNMLMTNLHAIQATLERSETDT
RQRLSDQLEKQEREISQLQKRLENEVEQRHLLSRNQEIHLMDTKRQLEIQAPLHQKTKEL
LNAAEFELKTLRMQLGSGEARHSLSSPSTPVLRGLPGSDQDREELQGRLRLAETQAEELA
ESLRAATSSMEQYRAMAQSMEESLDKEKKVTEQARSSIESRLKEAEKQHQKLEEQLLEAE
KEKQNSEEQKRRALASLEEQMESLRRSLSSAQAEHQAVLQRVAVAEAQQQQALQDSLEQA
KLAAEAQDKYEQEMLLHAADVEALQTAKAQALQAVELRLQLDERSQRVGAELLEARVSWE
EQEKIIKEEMAKTESRHDELQKQNTLLHEQIQTMSRKMADTLQRAINESPMNISLTEEGK
SQDQVLEILRFVRREKEIAESRFEVAQGETLRHRLRVEHLERELKEMQDSLSAAKERMQV
TAKTLAQHDELMKKTETMSILMETNKMLREEKNKMELELQQTQAKLQKLQSDIMPLQQAN
SELSEKSGMLQAEKKILEEDIKRWKARTQHLVSQQKDSDPEEYKRLHSEKEVHLKRIQQL
TEESIRLKVEVARTNTLTVSLQSQMQNLRDNMSKINEDRNTLKKEVEAKHQELQEKVRTI
TQVKKIGRRYKTQYDELKVEHDKLVAEAAAGPSQEEEARQASVQELQSLRDSLSQAEAKT
KELEGQLENINKVVTERETDGRNAQEQASRQQAELTRLRQELQDKSTQEETLRQQMTEKE
DKTRKAIVYAKQKINNLTNSKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQEREL
RDLRGQQERQEQRDEPAEAGPSKTQEQQRSTEQRQISLKTTPAADRGSASTSEPPTANIK
PTPVATGSKQPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVENQEAMQSSEGP
PVEHVTVYGSASGSVRSSSPNVQTTLASPMLNVQQTQTQATAFVQPTQQQSVSHAEPANQ
EPPPVVIEATPSPQVEWPSTSSSSSVFGTVSATPGSSMSKRPREEEESTTMLTDTDSTQE
DTSRAPIPKKLRIIQIVGPEEEVLAGDSAEAEVPTDSQDGAEASQTEEFQELDEGDEGAG
SQSVMMEQEVTLSQRGTPEPLLHEVIVIVTDTESEEEQEDEEEEEEEQDYEEEEEEEEED
EEDEEEDEEEDDGEMVEEGEDSNEGSGDGNEAYEGDDTEGADVTDPGTETEESLGASDST
QRPADSQTASFESTAMEAFSTDQPITSSGSRMPQSPRRPTQQLPSRMSIALTSDLGPHAQ
RNPVRRQSVGRVPQLTPGVQGTSQHFFVDDDSIVPCTPTLVVPHRSEGLDNSSQVAGVPR
FRFGFSDDSPQTSLSSHSDLGQLASQGGLGMFESPLFLAPHEEESGGRSVPTTPLQVTAP
VNIFSEAQSDSTEHASQSVPIVSMSTPGGAGSGEDRDDALLEPDSDRPSGDLSGDSVVSQ
GDVEESGQQSDKASLPSTSQEPPSSSTDTRSATPRPSRPGSSRQLQRWPEHRGGRMKRGA
ACEVPRWPRGSRLSMNHNHHFSGQGFPSRGLHGRRFAR
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgctgctgcaggagttggaaccctctgagatttcaaagctaccaaaaacg
gttcaaaacaaactcgagaaggttttttcggatcagcagtatgaaatcgattctttgaaa
gcgcaacaagaacagtttcgagttgacagcgagcaacacttcttcgaaaaagtgaaacaa
cttgctcagtgccaagaaaaatgtttatccacgactcaagaacatcttaaactcaaagat
gagtttgccaagcaagtggaagatgttaaaagcttgcgtgagaagaacagggaatatgaa
tcctcgcaagagaggctgtcatcagagcagactttgctgtcaaaagccaaagaggaattg
gaggcagaaaagcgagagcttttgaggacactggagaagagatccttacaagtggagcat
ttaaatgatgacttcaggcaactcaatgataagttggctgaggtcaacacctccaagatg
gcgctgcagatgaagttggatgaacttgaatcggctgaagtcaacatcaaatacaaggag
aagcgtatggaacaagagaaggtgctgctgaatggccaaacatcttggctgaatggggaa
ttgaaggctaagagtgaggaactgctgtccctatcccgacagaagggaaacgacatcctg
gagctgaagtgcaacctggagaacaaggaagatgagttgaatagactcaaagaccaagtg
gccagtttgaagtcttcaaatgaacaacttcagaaacagaacgaggacatgatcagcaaa
ctaagagaagccaaggaacaacaagccaccatggaggaaaagtacagaaatgagctgaat
gccaacattaagctttccaatctatacaagggagcagcagcggattctgaggcaaaaagt
gacgagctgactctggcagtggaggaactgcataaactcctgaaggatgctggagaagcc
aacaaggctcttgaggagaagttgcaggatatgaatggtgccacagacaagagtgttgct
gagctaaaggagaggatccaggttctcgagaaagagctggacaataccaacgagctgcta
tcaagttccacacttagaggtcctattagttcagcatctgtgatatcagaagaacaactg
acaacaatgtctccaacagcagctgctgtgtctaaaatcaagcctggcatgaggctgaca
gagttgtatacagcatatttggagagccaggagcatctgcagctggagcgattggagaac
aagcgggtcaacaagtacctggatgacattgtgcaggaagtggaagccaaagcccctatc
ctcaaacggcagagggatgaacatgagcgcatgcaaaagtcggtgacaagcctttctgct
aagctggagcacgctgttatggaagttcaccgtcttcagaaggaagctgatgaagctaac
aaacgctcgtctgttctggaaagggacaaccagagatctgaactgcagctaggagacatg
gctcagcaagtgcgtgtgctgctcatcgagctggaagaggctcgtggaaactatgtgcct
catgaggacgatgggagctcagctgatgtcagcagcacatcagaagtgatcagccaacac
ttggtgaccttccgcggtgtggaggagctgcagaagcaaaaccagcgtcttctagtggcc
ctcagggagctcagtgaggcccaggagaaagaggagattgagacctctggcagcaagcgt
ggtgaactggagcagagtttgggtaaagcccaggtagagctggagtctctgagggagcaa
cgcggccaacagataaagatgactgagtccatcgtgaggcagagggacatgtaccgtgtg
ctgctggctcaggcaacaggagtcagcttccctcagcaaggtacaccacctgaggatttc
tccctgacctccacccccggacgctcaccagcagccattcccacctcaggaacacccact
gcacttgtctccatgacaacagattctactgaagccttagaagccaaggcagctttgcga
cagttgcaggaggtgttctccacctataagaaggagcgcatggagagtgacaaggcagtg
actgggcagggcgagaagctccaggagcagctctcaaacctccactcccagaatgccaag
atatccactcagctggagtttgcctccaagaggtatgagatgctgcaggacaatgttgag
cgctacaggaaagagattgcttccctcagagagaaagaacagaagactgctgctgccgca
cagaagcacgagcagaccatacactctttgaatgaggatttgagagctgccaaagagaaa
ctatccatggctgagggccatgttcagagcatgcgtaaggagagagacatgctgaaactg
gtggagtccaggctgaatcaggagaaggagtcactgcagagccaacaacagagccagaac
atgctgatgaccaacctccatgccatacaggccactcttgagcgttcagagactgataca
cgtcagcgtttgagtgaccagttggagaagcaggaacgagagatctcccagctgcagaag
aggctggagaacgaggtggaacagcgccacctgctcagcagaaaccaggagatccatctg
atggacacaaagaggcagctggagatacaggctccgttacaccagaagaccaaagagctg
ctgaatgctgcagagtttgagctcaaaaccctcagaatgcaactcggcagcggcgaagca
cgtcactccctgagctccccatccacgcctgttctcagaggcttgccaggttcagatcaa
gaccgagaggagctacagggccgcctgcggctggctgaaacccaagcagaggagctggca
gagagcctcagggccgccacctccagcatggagcagtacagagccatggctcagagcatg
gaggaatccctggacaaagagaaaaaggtgacagagcaggcacgctcgtccatcgaatcc
cgtttgaaggaggctgagaagcagcaccaaaagctggaggagcaacttctggaggcggag
aaagagaaacaaaattcagaggagcagaagagaagagccctggcctctctggaggaacag
atggagagtctcaggaggagtctcagcagtgcccaggctgagcaccaggcggtgctgcag
cgcgtggctgtagccgaagctcagcagcaacaagctctgcaagacagcctggagcaggct
aagctggcagccgaagcccaagataagtatgagcaggagatgttgctgcatgcggccgac
gtggaggccctgcagaccgctaaggctcaggccctgcaggccgtggagctccgcctgcag
ctggacgagagatcccagagggtcggtgctgagctgctggaggccagggtctcctgggag
gagcaggaaaagatcatcaaggaggagatggcgaagacggagagccgtcacgatgagttg
cagaagcagaacactctcctgcatgagcagatccagaccatgagcaggaagatggccgac
actctgcaacgtgctatcaatgagagtcccatgaacatctctctgactgaggagggcaaa
tctcaagaccaagtcctcgagattctcaggtttgtgcgtcgggagaaggagattgcagag
tctcgttttgaggtcgcccaaggggagaccttgcgtcaccgcctgagggtggagcacctg
gaacgagagctgaaggagatgcaggacagcttgagtgccgcaaaggagaggatgcaggtc
acagcgaagaccctggcgcagcacgatgagctgatgaagaaaactgaaactatgagcatc
ttgatggagaccaacaagatgctgagagaggagaaaaacaagatggagctggaacttcaa
caaacccaagcaaaattacaaaagctgcagtcagacatcatgccactacagcaggccaac
tctgagctgagcgagaagagtggcatgctgcaggcggagaaaaagatactggaagaggac
atcaagcgctggaaagctcggacccagcatttggtgagccagcaaaaggattcagatcca
gaagagtacaagcgtctgcactcggagaaggaggtacatctgaaacgcattcagcagctc
actgaggagagtatccgactcaaagtagaggttgccaggacgaatactctcacagtgtct
ctgcaaagccagatgcagaatctgcgtgacaatatgagtaaaataaatgaagataggaat
acactgaagaaagaagtggaggccaagcaccaggaactccaggagaaagtgcgaactatc
actcaggtcaagaaaattggacgtcgctacaagactcagtatgatgaactcaaggtggaa
catgacaagttggtggctgaggcggcagcaggcccatcccaagaagaggaggctcgtcag
gcctcggttcaggagctgcagagcctcagagactctctgagccaggctgaagcaaagacc
aaagagctagaggggcagctggagaacatcaacaaggtggttacggagcgtgagactgat
gggcgaaacgcccaggaacaggcctccaggcagcaggcagagctgaccaggctgaggcag
gagctgcaggataaatccactcaggaggaaacgctgaggcagcagatgactgagaaggag
gacaagaccaggaaggccatcgtttatgccaagcagaagatcaacaatctcacaaactcc
aaagaccagcttcagaaggaaaatgaggaactgaagcaacagcgtgaggagctggaggtg
cgagtgagcgctctcaagtctcaatacgagggccgtctgagtcgacaggagagagagctg
agagacctgcgaggccaacaggagagacaggagcagagagacgagccggccgaggcgggg
cccagcaagacccaggaacagcagaggagcacagaacagagacagatcagtctgaagacc
accccagcggcagacaggggcagtgccagcacatccgagcctccaacagccaacattaag
cccacacctgtggcgacaggcagcaagcagcctgtcaatcctgggaacaaacccactccg
agagctagcatccggcccatgattaccccagccactgtgcccacgccaacacccacggct
actgtcatgccaaccacacaggtggagaaccaggaagccatgcagagtagcgagggcccc
ccggtggagcatgtgactgtgtacggcagcgccagcggctcggtgcgctcctccagcccc
aacgttcagaccaccttagcgagccccatgctgaatgtgcagcagacccagacacaggcc
acagcctttgtccaaccaactcaacaacaaagcgtgagccatgcagagccagccaatcag
gagccaccacccgtggtcatcgaggcaacacctagcccgcaggtggaatggccttcaacg
tcctccagctcctctgtgtttgggactgtttcagcaacgcccgggagctccatgtcaaag
aggcctcgggaggaggaggagagcaccaccatgctcactgacacagactccacccaggaa
gatacctcccgggctcctatacctaagaagctacgcatcatccagatagtgggtccagag
gaggaggtgctggccggggacagtgctgaggctgaggtgccaacagacagtcaagacggt
gcagaagcaagccagacggaggagtttcaagaactggacgaaggagacgagggtgctggc
tcccagtccgtcatgatggagcaagaggtcaccctgtcccagcgtggcacccctgaaccg
ctgctgcacgaagtaatcgtcatagtaacagacacagaaagtgaggaagaacaggaagat
gaggaagaagaggaagaagagcaggattacgaagaggaggaagaagaggaggaggaagat
gaagaggacgaggaggaagacgaggaggaagacgacggagagatggtggaggaaggagag
gacagtaacgagggcagcggagacggcaacgaggcgtacgaaggagacgacacagaggga
gctgatgtaacggacccgggcacggagacagaggaaagtttgggggcgtctgactccacc
cagaggccggcagattcccagacagccagctttgagagcactgcaatggaggccttctct
actgatcaacctatcacaagctctggttctcggatgccccaatctccacggagaccaaca
caacagctgccctctcgaatgagcatcgccctgacatcagacctgggaccacatgctcag
cgtaaccctgtccgtcgtcagtcagtgggaagagtgcctcagctcacccccggggtgcag
ggcacttctcagcatttctttgttgatgatgacagtatagtgccctgcacccccactctg
gtggtgccgcaccgctcagaaggacttgacaattcttcccaagtggctggtgtgcctcgc
ttcaggtttggtttttcagacgacagccctcagaccagcttgtcctcacactctgacctg
ggacagctcgcatcacaaggaggtcttgggatgtttgaaagtcccttgttcctagcacct
catgaagaggagtcgggtggacgcagcgttcccaccacaccattacaagttacagcacca
gtaaatatcttctcagaggctcagtccgactccactgagcacgcctctcagtcggttccc
atagtgagcatgtccacgccaggaggcgccggctcgggggaggacagagacgacgccctc
ctggagccagactctgatcggcccagtggagatctgtcaggagattcagtggtctctcag
ggggatgtggaggagtcaggtcagcagtctgacaaggccagtctcccctccaccagccag
gagcccccctccagctccacagatacaaggagtgctacacctcgaccctccagacctgga
tccagcagacagctgcagcgctggcccgagcaccgtgggggccgcatgaagagaggggca
gcctgtgaggtgccaaggtggcctaggggctcaaggctgtccatgaaccacaaccaccat
ttttctggtcagggatttccttctcggggtttacacggaagacgatttgcgagatga
DBGET
integrated database retrieval system
