Trematomus bernacchii (emerald rockcod): 117495623
Help
Entry
117495623 CDS
T09643
Symbol
gatad2ab
Name
(RefSeq) GATA zinc finger domain containing 2Ab isoform X1
KO
K23194
transcriptional repressor p66
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117495623 (gatad2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117495623 (gatad2ab)
03036 Chromosome and associated proteins [BR:
tben03036
]
117495623 (gatad2ab)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117495623 (gatad2ab)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
117495623 (gatad2ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
DUF7573
FYVE
Zn_ribbon_8
LIM
Motif
Other DBs
NCBI-GeneID:
117495623
NCBI-ProteinID:
XP_034002883
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MVRAAMSEEAVRLTRSQKRALEKDPDAPEEPLEDMEIDSKRVKLEKGDAAEAPVALVGSE
AEGNKLTEPDAKVATSILKTGEVKATIKVEVPTGDMPVDMSTSKSDIKNERQPPSPDDVI
VLSDNEPSSPVMNGHCLPDTDKLMKSSPEERERIIKQLKEELRLQEAKLVLLKKLRQSQI
QKESNVQKSSGSVATPPPLVRGSLISSKGPLQAIGRSSGTVIPPPLVRGGQHMPSKHNSQ
ISMPPLVRGAQHLAVTPQQIASLRQQQHQHSGSGPPPLLLAPRASVPNVQIQGQRIIQQG
LIRVANVANSNIMVNIPQASPTSLKGSSASSNSNINDSPASRQAAAKLALRKQLEKTLLE
IPPPKPPAPEFNFLPSAANNEFIYLLGLEEVVQKLLEMHGRGNVGPAAAIASSIPKEPYT
CAQCKTDFTSRWRKEKAGTILCDQCMSSNQKKALKAEHTSRLKAAFVKALQQEQEIEQRI
LQQAASSASASKTSSPSLSKSEVLVSQQYKQVRAAMQHRSVAGHHSMKQGHMSHGIQSMS
SRGMAHAFTSSSQLQSAMAAAAMSSRAGKHAAARPMQHGGKVSAGSSNQANVANWRKQTG
GNTGVTMAYVNPSLSAHKTTSAVERQREYLLDMIPSRSISQAANTWK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggtgagagcagccatgtcagaggaggcagtgcgtctaacgcgcagccaaaagcgggct
ctggagaaggaccctgatgctccagaggagcccctggaggacatggagatagacagtaaa
cgggtaaagctggagaaaggtgatgcagctgaagctcctgtggccctggttggatctgaa
gctgagggaaacaagctgactgagccggatgctaaagtagcaaccagcatcctaaaaact
ggggaagtgaaggccactataaaggtggaggtgccgactggagacatgcccgttgatatg
agcacatctaaaagtgacattaagaatgagcggcagccaccatcgcccgatgatgtgatc
gtgttgtcagacaacgagccatccagtcctgtcatgaatggccactgcttacctgacaca
gataaacttatgaagagttctcctgaggagagggagcgcatcatcaaacagctgaaggag
gaactcagactccaagaggccaagctggtgctgctaaagaaactacgacagagccagatt
cagaaggagagcaacgtgcaaaagtcttcgggctctgtagccactcctcctcctctggtg
agaggtagcctcatatcaagcaaaggacccctccaggcgataggtcgaagctcaggcaca
gtgatccctcctcctttggtgcggggtgggcaacacatgccgtccaaacacaactctcag
atttccatgccacccctggtcagaggggcccagcatcttgcggttactccccagcagata
gccagtctacgccagcagcagcatcagcacagcggctcaggcccccccccactcctgctg
gctcccagggcttctgtgcccaatgtccagatccagggccagaggatcattcagcaggga
ctcattcgggtggctaatgtggccaacagtaatatcatggtcaacatccctcaggcctct
ccaaccagcctcaaaggctcttcagcctcatccaactctaacatcaatgactccccagcc
agcaggcaggcggctgctaagcttgctctgcgtaagcagctggaaaagacgctgctggag
atccctccacctaaacctcccgcccccgagttcaacttcctgccttcagcagccaataat
gagtttatctacctgttggggctggaggaggtggtgcaaaaacttctggagatgcacggc
aggggtaatgtgggcccggctgctgccattgccagctccattcccaaagagccatacacc
tgtgcccaatgtaagacagactttacctcccgctggaggaaggagaaggctgggaccatc
ctctgtgaccaatgcatgtcgtccaatcagaagaaggccctgaaggctgagcacaccagt
cggctgaaggcggccttcgttaaggctctccaacaggagcaggagatcgagcagcgcatc
ctccagcaggcggcctcctccgcctctgcctctaaaacctcctctccttcactctccaag
agtgaggtgctggtgtcgcagcagtacaagcaggtccgggctgccatgcagcacagatct
gtggctggacaccactccatgaagcagggtcacatgtcacacggcatccagtcgatgagc
tctcgtgggatggcccacgctttcacttcctcctctcagctgcagagtgccatggcggca
gcagcgatgagcagcagggcgggaaagcacgccgccgcacgcccgatgcagcacgggggt
aaggtcagcgccgggagcagtaaccaggccaacgtggctaattggaggaagcagactggg
ggcaacacaggtgtgactatggcctatgtgaaccccagcctgtctgcccataagaccacc
tctgctgttgagcgtcagcgagagtacctgctggacatgattccctcccgctctatctcc
caagcagccaacacatggaaataa
DBGET
integrated database retrieval system
