Trematomus bernacchii (emerald rockcod): 117495637
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Entry
117495637 CDS
T09643
Name
(RefSeq) rho GTPase-activating protein 21-like isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117495637
Membrane trafficking [BR:
tben04131
]
Endosome - Golgi transport
Others
Others
117495637
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117495637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
PH_9
PDZ_6
PH
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
117495637
NCBI-ProteinID:
XP_034002933
LinkDB
All DBs
Position
Unknown
AA seq
1874 aa
AA seq
DB search
MDTIFVKQVKEGGPAHGAGLCTGDRIVKVNGESIIGKTYSQVIALIQNSDASLELCVMPK
DEDILQLFSRDITALAYSQDAYLKGNDAYSGNAQNIPEPPPICYPRIEVKAAGMAQTSEP
AAVIETAQGPAQGPERRGGVEEKSYRVEIPVPPSPTIQQTSKSQTVACVCNDNVRTVAMP
PDPVDRGSWVARAGPSHRTEENRYSPSKDSGSAKPRPLIPSIPGGAQLQHPSSRSTESSG
YSPSSKPGPIYPDTLSPPVRAAAVSPDTFSTAISPSANQYSPSPTAPSLSPHQNIDWKNY
TTYKDYIDTKRHTYGCRTIQERLDSLRAAANSSSAYTQQRTQSPPSTSPRAELGSQARRK
STSNDREVDTYSQGTSVTPLRSVSQERLGNGADRSRPLRNWPRSASEDALPFSSPTGVHK
PRARSCDYLGQQPGESGGLAVFGDRVGLEDRLLLCRGEDARASRQGTGVRALPHLNRSLT
GQGEEGREGGLSNSSLAVPVFTKGTLDSVLPSRTDGVIMRPSRLPVKNSILDPSPALSST
KTTDPLKDQRANIMANHLGYSSPLHLQLRDRADSLKLESRLEAGLAARSSSCSGTSSKLP
MQRQQPSLDVASSSGFSTTNGAVTQKPKVREISSSTGALIRTNGSLAEGVQGLDATVVVL
RRDKNSGHPHIRPPSYVLAVNDQGGVTHKSPPLVKAGSADGAICWTSNDSFREMHLRRLG
DTRHKSGSNNLDDSLDSIPFIDEPSSPSTDQDSTHIPASAVISTTPIITTIPPSPTVPAP
FIRRQLSHDQDSLRLTIIESDSGTKTERSKSYDEGLDNYREESKGRGLIPGLKNLRKALD
RSSEDSGSRRDSSSDIFCDATKEGFMHFKQLNTDKGKRVGGGMRPWKQMYAVLRGPYLCL
YKDKKEGQAHANCQTVDEPLPISIKACLIDISYSDTKRKNVLRLTTSDCEYLFQAEDRED
MLAWIRVIQENSNLDEENAVLTSHDLISRKIKEYNTLMSPTGSKTEPSPKPSRQSLSIRH
TLLGGKGDTKATSPTTPKSEQERKNMHKDDTSPPKDKGTWRKGIPGLMRKPFEKKPSPGV
TFGVRLDDCPPALNNKFVPLIVEVCCNLVEDRGLEYTGIYRVPGNNAAISHMQEELNNKG
MNDIDIQDDKWRDLNVISSLLKSFFRKLPEPLFTNDRYGDFIEANRTVDPVERLKVLKRL
LHELPDHHYETLKFLSAHLKTVADNSDKNKMEPRNLAIVFGPTLVRTTEDNMTHMVTHMP
DQYRIVEALIQNYHWFFTEEGNEDPATMSHYGSAVESQPIPNIDHLLTNIGRTGTSQGEV
SDSPTSDSAKSKGSWGSGKDQCSRELLVSSIFAAASRKRKKSKEKPQHSSSDDDLDSVFT
KKEITGQNPNHLQIEVLRDSRPSPNAKPNAKQPEERKENGRAVEITPKAKREHRNSLFLK
EKTPPRPSPSPKISGPQTAPQRKSSSVSDPPSQLDENTSGTTSSGVSLSRSRPKKWTGAS
LDLPAGASVGLASSQGASAGAEVSSITSDYSTTSSITFLTGAESSILSPELCGEEADDER
SELISEGRPMETDSESDFPVFAPSGGSSQSTPCPEDKSEARGSGAAEGSAAPKMEARRLF
PSHRMIECDTLSRRWSLRQKTDSESSVEGVSGSGERSESRSESSTRLSRVLEVMKKGRST
SSLSSSSRSESERAEPAWHVKITERLKLRLRTSADDMFTQKNRGTEARGKKKNIRRRHTM
GGQRDFAELAVINDWREQGGVDQTADLSALDRLKPRCSSQDFSIQNWITRERCKGSDSSV
EVAPKALPEDQEAQEVASERPLPPSESPSVQPPAGEQVNGSGLQSKNKASLGADPHPHKL
SGAQVVRSRFYQYL
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggacaccattttcgtcaagcaagtgaaggagggaggccccgcccacggagctggactc
tgtacaggggaccggattgtgaaggtgaatggagagagcatcattgggaagacatactcg
caagtcatagccttgatccagaacagcgatgcctcactggaactctgtgtgatgccaaag
gatgaggatattttgcagctgttttccagggatatcactgctctggcgtattcccaggat
gcatacctcaaaggaaatgatgcgtacagcggaaatgcccagaacatcccagagccccct
ccgatatgctacccacggatagaagttaaggctgcgggcatggctcagacatcagagccc
gccgcagtcattgagaccgcccaaggtccggctcagggaccagaaagaagagggggagtg
gaagagaaaagctacagggttgaaatccctgttccgccatcgcctacaatccaacagacg
tcaaagtctcagacagtggcgtgtgtctgcaatgacaatgtgaggacagtagccatgcct
cctgatccagttgacagggggtcctgggtggctcgggctggacccagccacaggacagag
gaaaatcggtacagtccttcaaaggattcaggctcagctaaaccaagaccccttattccc
tcaatacctgggggtgcacagttgcagcacccctcttcccgttccacggaaagctcaggc
tactccccttcatcaaaacctggtccgatctatcctgacacgttgtcgccacctgtacgg
gccgccgctgtctcaccggacacgttctccactgccatatcacccagcgccaaccaatac
tcaccctctcccacagccccctccctctctccacatcagaacatagactggaaaaactac
acaacctataaggactatattgacaccaagaggcacacgtatggctgccgcaccatacag
gaacgcttggacagcttgcgggcagctgctaattccagctccgcttacacacagcaacgt
acacagtctcctcctagcaccagtccaagagcggaactgggctcccaagctagaaggaaa
agcacctccaatgaccgcgaggtagatacttatagccagggcacttcagtcactccatta
cgtagcgtttcccaagagaggcttggaaatggggcagaccggtcaagaccgctcaggaat
tggccaaggagtgcttccgaggatgctctgcctttctcaagccccacaggagtgcacaaa
cctcgggcgaggtcttgtgactatctggggcagcagcctggagaatcaggtggcttggca
gtgtttggagatagagtagggttggaggaccggttgttgctgtgtcggggagaggatgcc
agagctagcaggcagggaacaggagtaagagctttacctcatctaaacaggagtctcact
ggacagggggaagaagggcgagaaggtggattatccaactcgtctttagctgttcctgtg
tttactaaaggtacattagattctgtactaccatcaaggacggacggtgtcataatgaga
ccgtcacgtctgcctgtcaaaaactctatcttagacccttcacctgccttatcctccacc
aagaccacagaccctcttaaagaccaaagagctaatatcatggccaaccacctgggctac
tcctcgcctctgcacctgcagctcagagacagggctgacagtctgaaactagagagcagg
ttagaggctgggttggcagccaggtcctcctcttgctctggtacttcctccaaactgccc
atgcagagacagcaaccaagtttagatgttgcttcttcttctggtttctccaccactaat
ggagctgtgactcaaaagccaaaagtcagagaaatctccagctccaccggcgctcttata
cggactaatggcagtctggcagagggcgtacaaggcctggatgcaacagtcgttgtttta
agaagggacaaaaactccggacatccccacatccgccctccatcctatgtactagctgtt
aatgaccagggaggagtgacacacaagtcaccaccattggtgaaggcaggctctgccgat
ggagctatatgctggacatcaaatgacagctttagggagatgcatctcagaaggctggga
gacacacgacataagtctggctccaacaacttggatgactccctggattctatcccattc
atagatgaaccatcgagtccaagtactgaccaggacagcacacacattccggcctccgct
gttatatccacaacgcccatcatcaccaccatcccacctagcccaaccgttccggcccct
ttcattcgacgccagctgtcacatgaccaagattctctacgtctcacaatcatcgagtca
gattctggtactaaaacagagcggtccaagtcatatgatgaaggcctcgataactaccgg
gaagaaagcaaagggaggggcttgatacctggtctgaaaaatcttaggaaggcgttggac
aggtcatccgaggattcgggttcaaggagggactcttcatcagacatcttctgtgacgcc
accaaggagggttttatgcatttcaaacagctgaacacagataagggcaagcgtgttgga
ggaggtatgcgtccatggaaacagatgtacgccgtgttgagaggcccctacctctgcctg
tacaaagacaaaaaggaggggcaggctcatgccaactgccaaacagtggacgagcccctg
ccaatcagcatcaaggcctgtctgattgacatctcgtacagcgacacgaagcgaaagaac
gtgctaaggctgaccacgtccgactgcgagtacctgttccaggccgaggaccgggaggac
atgctggcctggatcagagtcatacaggagaacagcaacctggatgaggagaatgcagtc
ttaaccagccatgacctcatcagcaggaagatcaaagagtacaacaccttgatgagcccg
acaggaagcaagacagagccatcacccaaaccttcacgccagtcactgagcatcagacac
acactgctgggagggaagggggacaccaaagcaacaagcccaaccacacccaaatctgag
caggagaggaagaacatgcacaaagatgacacaagccctcccaaggacaaaggaacatgg
aggaagggcatcccggggctgatgaggaaaccttttgagaagaaaccgtctccaggagtc
acgtttggagtgaggctggacgattgtcctcctgcactgaacaacaagtttgtgcccctg
atcgtggaggtgtgttgtaacctggtggaggacagggggttggagtacacaggcatatac
agagtgcctggaaacaacgcagcaatctcacacatgcaggaggagctcaataacaagggc
atgaacgatatcgatatccaggatgataaatggagggacctgaatgtgatcagcagtttg
ctaaagtccttcttccgtaaacttccagagccattattcactaatgataggtacggagat
tttatagaagccaacagaacagtagacccagtggagagactcaaagtgctaaagaggctg
cttcatgagttgccggatcatcattacgagaccctcaagttcctctcagctcatctcaaa
actgtggctgacaactcagacaagaataagatggaaccaagaaaccttgccatcgtgttt
ggtcccacgctggtgcgcaccacagaggacaacatgacacatatggtgacacacatgccc
gaccagtacaggatagtggaggccctcattcagaattatcactggtttttcactgaagaa
ggaaatgaagatccagcgactatgtcccattatgggagtgcggtggagtctcagcccatc
cccaacatcgaccacctgctcaccaacatcggccgtacgggcacctcgcagggtgaagta
tcagattcacccactagtgactcagcgaaatcaaagggttcctggggctcagggaaggac
cagtgcagccgagagctcctggtctcctccatctttgctgcagccagccgcaaaagaaag
aaatcaaaggagaagccgcagcatagcagctcagatgacgatctggattcagtttttacc
aagaaggaaatcactggacagaatccgaaccacctccagattgaggtactgcgcgacagt
cgtcctagccccaacgcaaaacccaacgctaagcaaccagaggagaggaaagagaacggg
agagctgtggagatcacacctaaagccaagagagagcacagaaactccttgttcctgaag
gagaagactccacccagaccctcaccttccccaaagatctcaggcccccaaacagctcct
cagaggaagtcctcctctgtgtcggaccccccatcacagcttgatgagaacacctccggg
accacgagttctggagtgtctctgtcccgctcgaggcccaaaaagtggactggagcatct
cttgatcttcctgcaggagcgagtgtcggactggcttcaagtcaaggggcgtccgcgggc
gcagaggtgagctccatcacctccgactactccaccacttcctccatcacgttcttgacc
ggagccgagtccagcatcctcagtccggagctgtgtggggaggaggccgacgacgagcgc
agtgagctcatcagcgaggggcgacccatggagacggacagcgagagtgacttcccggtg
ttcgccccgagcggaggcagcagccaatcgacaccctgcccagaagacaagagtgaagca
agaggaagtggagcagcagaggggagcgccgcgccaaaaatggaagcgcgacgcctcttc
ccgtcgcacaggatgatcgagtgcgacacgctctccagaaggtggtccctgagacagaaa
acagacagtgagtcgtcagtggagggtgtgtccggaagtggggagcgtagcgagagcagg
tcggagtcttccacgaggctctctcgagttctggaggtgatgaagaaaggccggtcgaca
agcagcctcagctcgtcttcacgcagcgagtcagaacgtgccgaaccagcctggcacgtg
aaaatcacagagcggctcaagttgaggttacgcacatctgcggacgacatgttcacccag
aagaaccgaggcacggaggctcgagggaagaagaagaacatccgccggagacacaccatg
ggcgggcagagggacttcgcagagctggcagtcatcaacgactggagggagcaggggggg
gtggaccagaccgccgatctgtccgctctggaccgcctcaagcccagatgttcctctcag
gacttctccatccagaactggatcacaagagagcgatgtaaaggatcggattcaagtgtc
gaggtggcgcctaaagccctcccggaggaccaagaagcccaggaagtagcttctgaaaga
cctcttcctccatctgagtctccgagcgtacagccgccagcgggggagcaagtgaacggt
agcgggctgcaaagtaaaaacaaagccagcctcggggcggaccctcacccacacaaactg
tccggggcacaggttgtacgctcacggttctaccagtatctgtga
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integrated database retrieval system
