Trematomus bernacchii (emerald rockcod): 117495656
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Entry
117495656 CDS
T09643
Symbol
fbn2b
Name
(RefSeq) LOW QUALITY PROTEIN: fibrillin-2b
KO
K23342
fibrillin 2/3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117495656 (fbn2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tben00536
]
117495656 (fbn2b)
Glycosaminoglycan binding proteins [BR:
tben00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117495656 (fbn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
FXa_inhibition
TB
hEGF
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
117495656
NCBI-ProteinID:
XP_034002964
LinkDB
All DBs
Position
Unknown
AA seq
2888 aa
AA seq
DB search
MASGKLAQVLLGWAAMCVGSFHLCWGETPGTGQYQASRFTGTEDQREVQRVRRRGQETLR
GPNVCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCSSGQLSSSCGAG
GGVQSCNVRCMNGGSCAEDSCSCTKGYTGNHCGQPVCENGCQNGGRCIGPNRCACVYGFT
GPQCERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEQCPAQPHPCRR
GFIPNIRSGACQDVDECQAVPNLCAGGTCINTVGSYECKCPAGHRQSETSHKCEDIDECT
TIPGVCDGGECSNTASSYVCTCPRGYVSSTDGTRCVDQRVGTCFSALANGRCAAELNGQY
TKMQCCCDTGRCWALGQIPEMCPVRGSDEFRRLCIVGVPQGHGLPPGYPNGHFPNGNGNG
NGYNYNGYKYPGVPNGNGNGGIGGNGGSFGGNGANGHQHIGSVSVNESIDVCKHFTNLCL
NGRCIPTLQSYRCECNMGYRQDVRGECIDVDECVSNPCVNGDCVNTPGGYQCKCHEGYQG
TPTKQACMDIDECIVNGVMCRNGRCVNTEGSFQCICNAGFELTPDGKNCMDHDECATTNM
CLNGMCINEDGSFKCICKPGFALAPNGRYCTDIDECLTPGICMNGRCINSEGSFRCECPP
GLAIDVDGRVCVDTHMRTTCYGAIKMGTCSRPFPGAVTKSECCCANAEHGFGEPCNPCPS
RNSAEFQAVCSSGIGITADGRDINECALDPDICQNGICENLRGSYRCICNIGYESDTSGK
NCVDINECNVNRLLCDNGLCRNTPGSYTCSCPKGFIFKPESETCEDINECDSSPCINGAC
RNVAGSFNCECTHGSKLDSTNTICVDSMKSTCWLTIQDNRCEVNINGATLKSECCSTLGA
AWGSPCDPCEIDTACSRGFARMKGLVCEDINECEVFPGVCTNGRCVNTQGSFRCDCVEGL
SLDSTGRTCVDTRSEQCYLKWHEDECGEPLPGRYRMDMCCCSVGSAWGVDCEECPQPSSP
EYRSICPRGPGFANRGEILTGRPFYKDVNECKVFQGLCTHGSCRNTIGSFKCRCSNGFAL
TAEERNCTDIDECRISPDLCGHGACVNTPGSFECECFEGYESGFMMMKNCMDIDECERNP
LLCRGGTCLNNEGSYECECPPGHALSNDGSVCEDVNECQLSDNLCKHGQCVNGPGTYQCT
CDTGYQGTPDRQGCVDIDECTIMNGGCETHCTNSEGGYECSCSEGYALMPDLRTCSDIDE
CEESPDICDGGQCTNIPGEYRCLCYDGFMASMDMRTCIDVNECDLNPNICLHGDCENTKG
SFICHCQLGYFVKKGSTGCTDVDECEIGAHNCDAHAACINVPGSFKCRCRDGWLGDGLKC
VDQDECSAEDHNCNPNADCVNTPGSYRCTCKEGFNGDGFFCSDMDECADNVNLCENGQCL
NAPGGYRCECEMGFTPTEDSKACQDIDECNFQNICVFGTCQNLPGMFRCVCDDGYELDRS
GGNCTDINECADPVNCINGLCVNTPGSYLCNCPADFELNPTGVGCVDTRVGNCFLDILAR
GDGGISCSAEIGVGVTRASCCCSLGGAWGNPCELCPAPNSTEYKTLCPGGEGFRPNPITV
ILEDIDECQELPGLCQGGNCVNTFGSFQCECPAGYYLNEETRICEGKNMCTTHIGICGRG
YLPYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNYNDTCENELSFNMTKKMCCCAY
NVGKAWNKPCESCPTPATTEYQLLCGNQAPGFIIDIHTGKPVDIDECREIPGICANGVCI
NQIGSFRCECPMGFSYNNILLICEDIDECNSGDNLCQRNANCINIPGSYRCECSPGFKLS
PSGACVDRNECQEIPNVCSHGECIDTQGSYRCICQNGFKATADQTMCMDIDECDRQPCGN
GTCKNTVGSYNCLCFPGFELTHNNDCMDIDECSALQGQVCRNGQCINGLGSFQCLCHEGY
ESTPDGKNCVDINECXSLPGTCSPGTCQNLDGSFRCICPPGYEVQNDQCIDINECEVEPN
ICQFGTCTNTPGSFQCTCQSGFVLSENKRRCYDTRESFCFTKFEAGKCSVPKALNTTKAK
CCCSKMPGEGWGLPCELCPRESEAAFDTLCPFGHGALPGLGDTREDMNECLDNPGICQNG
ICINTDGSFRCECPFGFNLDYTGVNCIDTDECSIGNPCGNGTCTNVVGGFECTCQDGFEP
GAMMTCEDINECSQNPLLCAFRCVNTFGSYECMCPGGYVLREDQRMCRDQDECSEGMDDC
DSKGMTCKNLIGTFMCICPPGMQRRPDGEGCMDLNECRAKPGICKNGRCVNTVGSYRCEC
NDGFESSVTGTECIDNRKGFCFTEVLQIMCQQSATNRNSVTKSECCCNTGRGWGSQCELC
PLPGTMQYKRMCPLGPGYTTDGRDINECTVMPDLCRNGQCINAIGSFHCHCNVGYKTDYT
STSCIDMDECALSPKPCNFLCKNTEGSYLCSCPRGYSMQPDGKTCKDIDECSSKQHNCQF
LCVNTIGGFTCKCPPGFTQHQTACIDNNECSAQNTACGTRAACVNTPGSFNCECSKGFSL
DGTGVECEDVDECGSNHRCQHGCQNMMGGFRCGCPQGYVQHYQWNQCVDENECQGASVCG
SASCYNTLGSFKCVCPSGFDFEQGGSGCQDVNECSGSSSNPCIYGCSNTDGGYQCGCPGG
FYRAGQGHCMSGSGFPGHVTEGDDEDSLSPEACYECKINGAGAGGGAKNGRHRRHTDGNE
LNEEPEVSMASIDTQGPIPMNLTLSSLLNKEPLLELLPALEPLEHHVRYVITHGNTNEHF
RLLERRDGKSVLRLAKRAPPAGSYRLEIASLRLFGPRRLHQLEEQHDTDYLRGEIGDALR
IKLLIHLH
NT seq
8667 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagggaagctggcccaggtgctgctgggatgggcggccatgtgtgtcgggtcg
ttccacttgtgttggggtgaaactcccgggacaggacagtaccaagcgagccgcttcacc
ggcaccgaggaccagagagaggtgcagcgggtcagacgccgcggccaggagactctgaga
gggcccaatgtttgtggctctcgcttccactcgtactgctgccccggctggaagactctt
ccaggaggaaaccagtgtatcgtccccatttgcaggaattcctgtggtgatggtttctgc
tccagacccaacatgtgtacctgctcgagcggccagctctcttccagctgtggagcagga
ggaggagttcagtcctgtaacgtcaggtgtatgaatggaggcagctgtgcagaggactcg
tgctcctgcacaaagggatacacaggaaaccactgtggacagcctgtgtgtgagaacggc
tgtcagaacggcggccgctgcatcgggcccaacagatgcgcctgtgtctacggtttcact
ggcccgcagtgcgagagagactacaggacggggccatgtttcacccaggtgaacaaccag
atgtgccagggccagctcagcgggatcgtctgcaccaaaaccctctgctgcgccaccatt
ggtcgagcctggggccacccctgcgagcagtgccccgcccagccacacccctgcaggagg
ggcttcatccccaacatccgcagcggagcgtgccaagatgtggacgagtgccaggctgtg
ccaaatctttgtgccggaggaacttgcatcaacaccgtgggatcctacgagtgtaaatgt
cccgcaggccaccgtcagagtgaaaccagccacaagtgtgaagacatcgatgaatgcacc
accatccccggtgtgtgtgatggaggagagtgcagcaacacggctagtagctacgtctgc
acctgtccacgaggctacgtctccagcacagatggcaccagatgtgtggatcagcgtgtt
ggcacctgtttctcggctctggctaacgggcgctgtgccgccgagctgaacggtcagtac
acgaagatgcagtgctgctgcgacacgggacgctgctgggctctgggacaaatccccgag
atgtgccctgtccgggggtctgacgagttcaggcgtctgtgtatcgttggagttccccaa
ggacacggcctccctcccggctaccccaacggacacttccccaatggcaacggaaacggc
aatggctacaactacaatggctacaagtatcctggagttcctaacggtaacggtaacgga
ggcatcgggggcaacggaggaagctttggaggaaacggggccaacggacaccaacatata
ggctcggtttctgtgaatgaatccatcgacgtgtgcaaacatttcaccaacctgtgtctg
aacggacgctgcatccccaccctgcagagctaccgctgcgagtgcaacatgggatacaga
caggacgtccgcggggagtgtatcgatgtggatgagtgtgtgagtaatccgtgtgtcaac
ggagactgtgtcaacacacctggaggataccagtgcaagtgccatgagggttaccaggga
acccccacgaaacaggcctgcatggatattgatgagtgtattgtgaacggagtgatgtgt
cgtaacggccgctgtgtgaacacagagggaagcttccagtgcatctgcaatgccggcttc
gagctcactcctgacgggaagaactgcatggatcacgatgagtgcgccaccaccaacatg
tgtctcaatggcatgtgtatcaacgaggacggcagcttcaagtgtatctgcaaaccgggc
ttcgctttagcacctaacggacgctactgcacagatatcgacgagtgtctgactcctggc
atttgtatgaacggccgctgcatcaactccgagggctctttccgctgcgagtgccctcca
ggcctggccatcgatgtggatgggagagtgtgtgtggacacacacatgaggaccacctgt
tatggcgccattaagatgggcacatgttctcgaccgttccccggtgcggtcacaaagtct
gagtgctgctgcgctaacgctgaacacggctttggagagccctgcaatccctgcccctcc
agaaactctgccgagttccaggctgtttgcagcagtggtatcggcataacagctgatggc
agagacatcaatgagtgtgccttggacccggacatttgtcagaacggcatctgtgagaac
ctgagaggaagctaccgctgcatctgtaacatcggatacgagtctgacaccagcggcaag
aactgtgttgacatcaacgagtgtaatgtgaaccgtctgctttgtgacaacggtctgtgc
agaaacacccccggctcctacacctgctcctgtcctaaaggattcatctttaaacctgag
tcagagacctgcgaggatatcaacgagtgcgactccagcccctgcatcaatggagcgtgt
cgcaacgtggccgggtccttcaactgtgagtgcacccacgggagcaagctggactccacc
aacaccatctgcgtggacagcatgaagagtacgtgttggctgacgatccaggacaaccgc
tgcgaggtcaacatcaacggagccacgctgaagtctgagtgctgctccacgctgggagcc
gcctggggcagcccctgtgacccctgtgagatcgacaccgcctgctcccgaggcttcgct
cgtatgaagggcctggtgtgtgaagacatcaatgagtgtgaggtgttccccggagtgtgt
acaaacggccgctgtgtgaacactcagggctcgttccgctgcgactgcgtcgagggcctc
agcttggacagcacgggacgcacatgtgtggatacgcgtagcgagcagtgctacctgaag
tggcacgaggatgagtgtggcgagccgttgccgggcagataccggatggacatgtgctgc
tgctccgtgggctcggcctggggggtggactgtgaggagtgtccccaacccagctccccg
gagtacaggagcatctgcccccgggggcccggcttcgccaacagaggggagatcctcacg
ggaagacccttctacaaagatgtgaatgagtgcaaggtgttccagggtctgtgcacccat
gggagctgcaggaacaccatcggcagcttcaagtgtcgctgcagcaacggcttcgctctg
accgccgaggagaggaactgcaccgatattgatgagtgccgcatctcccccgacctttgt
gggcacggagcctgcgtcaacacgcccggcagcttcgagtgcgaatgcttcgaaggctac
gagagcggcttcatgatgatgaagaactgcatggacatcgatgagtgtgagaggaacccc
ctgctgtgtcgtggaggaacctgcctgaacaatgaaggaagctacgagtgtgaatgcccc
cccggacacgcgctcagcaacgacggatctgtgtgtgaagatgtgaatgagtgccagctg
agtgacaacctgtgtaaacacggtcagtgtgtgaacgggccggggacgtaccagtgcacc
tgtgacaccggataccaggggacccccgacagacagggctgcgtggatattgatgaatgc
accataatgaacggcggctgtgagactcactgcacgaactcagagggaggctacgagtgc
agctgcagcgagggatacgctctgatgcccgacctgcgcacctgctcagatatcgatgag
tgtgaggagtctccggacatctgtgacggaggacagtgcaccaacatccccggagaatac
cgctgcctgtgttacgacggcttcatggcctccatggacatgaggacgtgtatcgacgtg
aacgagtgtgacttgaacccaaacatctgtctccacggcgactgcgagaacaccaaaggc
tccttcatctgccactgtcagctgggatactttgtgaagaagggatccacgggctgcaca
gatgttgatgagtgtgagatcggagctcataactgcgacgcgcacgccgcctgcatcaac
gtgccgggcagcttcaagtgtcgctgcagagacggctggttgggagacggcctcaagtgt
gtggatcaggacgagtgctctgcagaggatcacaactgcaaccccaacgcagactgtgtg
aacacgccggggtcctacaggtgcacctgcaaggagggcttcaacggggacggcttcttc
tgctccgatatggacgagtgtgcggacaacgtgaacctgtgtgagaacggccagtgtctg
aatgctccgggggggtaccgctgcgagtgtgagatgggcttcacccccaccgaggacagc
aaggcctgccaagacatcgacgagtgtaatttccagaacatctgtgtgttcggaacgtgt
cagaacctccccgggatgttccgctgtgtgtgtgacgacggatacgagctggaccgcagc
ggaggaaactgcacggacattaacgagtgtgcggaccctgtgaactgcatcaacggtctg
tgtgtgaacacgccgggcagctacctgtgtaactgccccgccgacttcgagctcaacccc
accggagtgggctgcgtggatactcgtgttgggaactgcttcctggacatcctggcccgc
ggtgacggaggaatctcctgcagcgcggagatcggagtgggggtgacccgcgcctcctgc
tgctgctccctgggaggagcctggggaaacccctgtgaactctgccccgcccccaactcc
acggagtataagactctttgtccaggaggagagggattcagacccaaccccatcactgtg
atcctggaagatatcgatgagtgccaggagctaccaggtctgtgtcagggtggaaactgt
gtgaacaccttcgggagtttccagtgtgaatgtcccgccggatactacctgaacgaggag
acccgcatctgtgagggtaagaacatgtgcaccactcacatcgggatctgtggacgcggg
tacctgccatacaacacgctgggcaactacacctgtgtgtgcccccccgagtacatgcag
gtcaacggaggaaacaactgcatggacatgaggaagagcgtgtgttaccgtaactacaac
gacacgtgtgagaacgagctgtccttcaacatgaccaagaagatgtgctgctgcgcctac
aacgtggggaaagcctggaacaaaccctgcgagtcctgtcccactccggccaccactgag
taccagttgctgtgtgggaaccaggctcctggcttcatcatcgacatccacactggaaag
cccgtcgatattgatgagtgcagggagatccccggtatctgtgccaacggagtgtgtatc
aatcagatcgggagcttccgctgtgagtgtccgatgggcttcagctacaacaacatcctg
ctcatctgtgaagatattgatgagtgtaacagcggggacaacctgtgccaacgcaacgcc
aactgcatcaacatcccaggaagttaccgctgcgagtgttcgccgggattcaagctgtcg
cccagcggggcctgtgtggaccgtaatgagtgccaggagatccctaacgtgtgcagccat
ggagagtgcatcgacacgcaggggagctaccgctgcatctgccagaacggattcaaggcc
actgccgaccagaccatgtgcatggacatcgatgagtgtgacagacagccgtgtggtaac
ggcacctgtaagaacacggtgggctcctacaactgcctctgcttccccggcttcgagctc
acgcacaacaacgactgcatggacatcgacgagtgcagcgctctgcagggtcaggtgtgc
aggaacgggcagtgcatcaacgggctggggtccttccagtgtctctgccacgagggctac
gagagcactccggacgggaagaactgcgtcgatatcaatgagtgtnngagcctccccggc
acctgctctccaggaacttgtcagaacctggacggatctttcagatgtatctgtcctcct
ggctacgaggtgcagaacgaccagtgtatagatatcaacgagtgtgaggtggagcccaac
atctgccagtttgggacctgcaccaacacccccggcagcttccagtgcacctgccagtcg
ggcttcgtcctctcggagaacaagcggcgctgctacgacaccagagagagcttctgtttc
actaaatttgaggctgggaaatgctccgtccccaaagctctgaacaccaccaaggctaag
tgctgctgcagcaagatgcccggagagggctgggggctgccctgcgagctgtgcccccga
gagagcgaggcagcttttgacacactctgtcctttcgggcacggagccctgcctggactc
ggcgatactcgtgaagacatgaatgagtgtctggacaacccgggcatctgtcagaacggg
atctgcatcaacacagacggctcgttccgctgcgagtgtcccttcggtttcaacctggat
tacaccggggtcaactgtattgacactgacgagtgctcgattggaaacccttgtgggaat
ggaacctgcaccaacgtggtcggaggattcgagtgtacgtgccaggacggattcgaaccc
ggagccatgatgacctgcgaggacatcaacgagtgctcccagaatcccttgctgtgtgcc
ttccggtgcgtgaacacttttggttcctatgagtgcatgtgccccggtggctacgtgctg
cgagaggaccagcgcatgtgcagagaccaggacgagtgctctgaggggatggatgactgc
gactccaagggcatgacctgtaagaacctgatcgggaccttcatgtgtatttgccccccc
ggcatgcagcgcagacccgatggagagggctgtatggatctgaacgagtgccgcgccaaa
ccgggcatctgtaagaacggccgctgtgtgaacacggtggggagttaccgctgcgagtgc
aacgacggcttcgagtccagcgtcactggaactgaatgcattgacaacagaaagggcttc
tgcttcacggaggttctgcagatcatgtgccagcagtcggccaccaacaggaacagtgtg
actaagtctgagtgctgctgcaacacagggaggggctgggggtctcagtgcgagctgtgc
ccgctgcccggcaccatgcagtacaagaggatgtgcccgctcggacccggatacaccacc
gacggcagagacatcaacgagtgcacggtgatgccagatctgtgtcgtaacggtcagtgc
atcaacgccatcggatccttccactgtcactgcaacgtgggatacaagaccgactacaca
tccacctcctgcatcgatatggacgaatgtgctctgtctcccaagccctgtaacttcctg
tgtaagaacacagagggcagctacctgtgctcctgcccccgaggatacagcatgcagccg
gacgggaagacctgcaaagatattgatgaatgttcgtcaaagcaacataactgccagttc
ctgtgtgtgaacaccatcggaggcttcacctgcaagtgcccccccggcttcacccagcac
cagacggcctgcatcgacaacaatgagtgctctgctcagaacacggcgtgtggaaccaga
gctgcctgcgtcaacacgcccggcagcttcaactgtgaatgctctaaaggtttctccctg
gacggcaccggcgtggagtgtgaggatgtggacgagtgtggcagtaaccaccgctgccag
cacggctgtcagaacatgatgggaggtttccgctgcggctgtcctcagggctatgtgcag
cactaccagtggaaccagtgcgtggatgagaacgagtgtcagggagcatcagtgtgtggc
tccgcctcctgctacaacacattgggcagctttaagtgtgtgtgtccctccggctttgac
ttcgagcagggcggcagcggctgccaggacgtgaacgagtgcagcggcagcagctccaac
ccctgcatctacggctgctccaacaccgacggagggtatcagtgcggctgccccgggggc
ttctacagggccggacagggtcactgtatgagcggctcaggtttcccgggacatgtcacg
gagggcgatgacgaggacagtctgtctcccgaggcgtgctacgagtgtaagatcaacgga
gcaggagcaggaggaggagccaagaacggacgccacagacgccacactgacggaaacgaa
ctcaacgaggagccagaagtgagcatggccagcatcgacacgcagggcccgatccccatg
aacctcactctgtcctcgctgctcaacaaggagcctctgctggagctcctgccggccctg
gagcctctggagcaccacgtccgctacgtcatcactcacgggaacaccaacgaacacttc
cgcctgctggagcgacgcgacggcaagagcgtgctccggctcgccaagagggcgcccccc
gcgggatcctaccggctggagatcgccagcctgaggctcttcgggccccgcagactccac
cagctggaggagcagcacgacactgactacctacgaggggagataggagacgccctgcgc
atcaagctcctcatccacctgcactga
DBGET
integrated database retrieval system
