Trematomus bernacchii (emerald rockcod): 117495695
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Entry
117495695 CDS
T09643
Symbol
fxr1
Name
(RefSeq) LOW QUALITY PROTEIN: fragile X mental retardation syndrome-related protein 1
KO
K15516
fragile X mental retardation protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117495695 (fxr1)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117495695 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
117495695 (fxr1)
mRNA cycle factors
Stress granule specific factors
117495695 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXR_C1
Tudor_FRX1
KH_1
Agenet
FXR_C3
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
117495695
NCBI-ProteinID:
XP_034003028
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MESPLLPPHVSPGASRSTCRPDILCVSNMEELVVEVRGSNGAYYKGVVKDIHDDSLTIAF
ENNWQPERQVPFHDVRMPPHADCKKEIGEGEEVEILSRANDQEPCGWWLAKVCMMKGDFY
VIEYAACDATYNEIVTFERLRPINANKAITKNSFIKCTVPVPQDLQEACQNDGAHKEFKK
AVGACRITYCPETSELVIVSTNEATVKRVSLLSDMHLRSIRTKLLLMSRNHEATKHLETS
RQLVSSFQEEFMVRTDLMGLAIGSHGSNIQQARKVPGVSAIDLDEETGTFRIYGETAEAV
KKARNYLEFLEDFVEVPRALVGKVIGKNGKVIQEIVDKSGVVRVRIEGDKDNKQPRQETQ
GMVPFTFVGTKESIGNVQVLLEYHISYLNEVEELRLERMQIDEQLRQVTQGHRPGDRERG
ERGERGGGGGGGGGGGYNTDGSANASSLHGSRSYNGQGRGRRGHGYSTGYGTNSEQSNAS
ETDSERRDELSDWSLAADDQDRERERGSRPQRDSRRRPGPGRGRGGPGGRGRGGRGGYSN
SSAGPRDHDDNSAYRVAEANTETDQTADTDASESNLPANRRRRSRRRRTDEETTLMDGMS
ESDNTSMSENGIDDSEVKPQRRNRSRRRRARLPEERQPVSVADYISRADSQSREMTTTKD
TNKNHDVGQVDAIAEDSPPSAPATTNGSNNNAGDGERNKTPAKVSYQGDCNPQPVANGLS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggagtcacctctcctgcctccacacgtctcccctggtgcctcaaggagcacctgtcgt
cccgacatcctttgcgtgtctaatatggaagaactggtggtggaggtccgtggctccaac
ggggcttattacaagggcgttgtcaaagatatccacgatgactctctcaccattgccttt
gagaacaattggcagccagagcgccaggttcccttccatgatgtcaggatgccaccgcac
gctgactgcaagaaggagattggagagggcgaggaggtggagatcctctccagagccaat
gatcaagagccttgtggttggtggctggctaaagtctgcatgatgaagggagatttttac
gtgatagagtatgcagcctgcgacgccacctacaatgagatcgtgacctttgagcgtctg
cgtccgatcaacgctaacaaggccatcaccaagaactcttttatcaagtgcactgtcccc
gttcctcaggatctacaagaagcgtgccagaatgatggcgcccataaggagtttaagaaa
gctgtgggagcctgtcgcatcacatactgccctgagaccagcgaactagtgattgtgtct
accaatgaggcgacagtgaagcgtgtgtccttgctgagcgacatgcacctgcgcagcatc
cggaccaagctgctgctgatgtcacgcaaccacgaggccacaaaacacctggagacctcc
aggcagctggtgtcgtccttccaggaggagttcatggtcagaacggatctgatgggcctg
gccatcggcagccacggcagcaacatccagcaggcgcgcaaagttccaggagtctctgcc
atcgacctggatgaggagactggaactttcaggatttatggagagacagcggaggctgtg
aagaaagccaggaactacctggagtttctggaggactttgtcgaggtgcccagggccctt
gttggcaaagtgatcggtaagaacgggaaggtcatccaggagattgtggacaagtcgggt
gtggtgagggttaggatagaaggagacaaggacaacaagcagccccgacaggaaacacag
ggaatggtcccattcacatttgtcggaactaaggagagtatcggcaacgttcaggtcttg
ctggagtaccacatctcttatctcaatgaggtggaagagctccgtctggagaggatgcag
attgatgaacagttgcgtcaggtcacccagggtcaccgcccaggtgacagagagagggga
gagaggggggaaagaggaggaggaggaggaggaggaggaggaggagggtacaatacagat
ggcagtgccaacgcctcctctttgcatggcagtcgctcttacaacggtcaagggcgcggg
cgcagaggccacggctacagcaccggatatggcaccaactctgagcagtccaacgcctct
gagacagactcagagcgcagggatgagctcagcgactggtccctggctgcagacgatcag
gacagggagagggagagaggctcccggccacagagagacagccgcaggaggcccggaccc
ggcagaggccgaggagggcctggaggtcgggggagaggaggaagaggaggatacagcaac
agctctgccgggcctcgcgaccatgacgataacagtgcctacagagttgcggaggcaaac
actgagacagaccagactgctgatacggatgcaagcgagtccaacttgcctgcaaaccga
cgcaggagatcccgaaggcgcagaacagacgaggaaaccactctgatggacggcatgagc
gagtctgacaacacctcaatgagcgaaaatggaatagatgactcagaagttaaacctcag
cgtcgtaaccgtagtcgacgtcgccgcgcccgcctgcctgaggagaggcagccagtgtca
gtggctgactacatatcccgggctgattctcagagcagagagatgacaaccaccaaggac
accaataaaaaccatgatgtgggtcaggtggatgccattgctgaggacagcccgccgtcg
gccccggcaactaccaacggctctaacaacaatgccggagacggtgagcgcaacaagact
cccgccaaagtctcctaccaaggggactgcaacccacaacctgtcgctaacgggctctcc
tag
DBGET
integrated database retrieval system
