KEGG   Trematomus bernacchii (emerald rockcod): 117495709
Entry
117495709         CDS       T09643                                 
Symbol
ell
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117495709 (ell)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tben01009]
    117495709 (ell)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tben03021]
    117495709 (ell)
Protein phosphatases and associated proteins [BR:tben01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117495709 (ell)
Transcription machinery [BR:tben03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117495709 (ell)
    Little elongation complex (LEC)
     117495709 (ell)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing Seryl_tRNA_N
Other DBs
NCBI-GeneID: 117495709
NCBI-ProteinID: XP_034003060
LinkDB
Position
Unknown
AA seq 705 aa
MAALKEEQCYGLSCGRVSNGSNVSVFHVKLTDSALKAFEGYQGSKVLSSRPLIRFNGNQG
KISIPRSENSSELQTFTFYLSHVGRDNPQGSFDCIQQYITSEGSIQLDCLGGIQDKITVC
ATDDSYQKARENMAQVEEETRSRSAIVIKLGGRYVGKKVQIRKPAPGLSDVAPLRRTSRP
VIISSSTLKKGTPQHRPLRERLTHLLALKPYKKAELILRLQKDGLLPLDKDSLDSYLQQV
AILNGKDNTFTLKDNLYKDLQMDWPGYTEGDQQLLKRILVKKQNQPPPVESPPKELAGNS
PSQKRPAADFTDPLANKKPRISHLASKAATAPVNGKLGSSNGRVETGNGRVETGNGRVET
GNGRVETGNGRVETGNGRVETGNGRVETGNGRVETGNGRVETGRVETGRVETGAAPAAVA
VSMADSGMTSSSQQLPVLDIPRPFEALSDVSNDSSHNGRDCDSQETAVSERLSQPPPSLF
TASTTLTAPSIVTSSPGHTGPDVPRDKSPSTFVNKSKKKSKKHKDKEKSKDKERVREKGK
EKKSRGERVQLVPEPKPACDMSPANLKSNSIPHKSTDLNGMCNSTSIPTSSPEVPDYLSK
YMVIGSPEQRQKYKTDFNAEYSEYRGLHARIEGITRQFTVLDNELKQLNQGTDKYKTIHN
QILQEYHKIKKTNPNYSQEKNRCEYLHNKLAHIKRLIAEYDQQQL
NT seq 2118 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaggaggagcagtgctacggactgtcctgtggaagagtgagcaacggt
agcaatgtctccgtctttcacgttaaactcactgacagcgcactgaaagcgtttgaggga
tatcagggcagcaaggtcctctcatcacgaccattgatcagatttaatggaaaccaaggg
aaaatttcaataccacggtcagaaaattccagtgaactgcaaacgtttactttctacctg
tcacatgtgggcagagataacccccagggcagcttcgactgcatccagcagtacatcacc
agtgaagggagcattcagctggattgtttgggtgggatccaggacaaaattacagtttgt
gccacggacgactcgtaccagaaggccagggaaaacatggcccaggtcgaggaggagact
cgcagtcggagtgccatcgtcatcaagctcggggggagatacgtaggtaaaaaggttcag
atccggaaaccggcacctggcctctcagacgtcgccccgctgcggaggacgtctcggccc
gtcatcatctcgagcagcacgctgaagaagggcacgcctcagcacaggccgctcagagag
cgcctcacacacctgctggccctcaagccttacaagaaggctgagctgatcctgaggttg
cagaaagacggcctcttgccattagacaaggactccctggatagctacctgcaacaggtg
gcgattctgaatgggaaggacaacaccttcacattgaaggacaatttgtataaggacctc
cagatggactggccaggctacactgaaggagaccagcagcttctcaagagaatcctggtt
aagaaacagaaccagcccccccctgtggagagcccgcccaaagagctggccggcaattcg
ccatctcagaaacggccagctgctgacttcaccgaccctcttgccaacaagaagcccaga
atatcccacctggccagcaaggctgcaacagccccagtgaacggcaaactcggctcctcc
aacgggagagtggagacgggcaacgggagagtggagacgggcaacgggagagtggagacg
ggcaacgggagagtggagacgggcaacgggagagtggagacgggcaacgggagagtggag
acgggcaacgggagagtggagacgggcaacgggagagtggagacgggcaacgggagagtg
gagacggggagagtggagacggggagagtggagacgggtgcagcgccggcagcagtggcg
gtttccatggcggacagcggcatgacgtccagctcccagcagctcccggtgctggacatc
cctcggcctttcgaagcactgtcagatgtcagcaacgactccagccacaacgggagagac
tgcgactctcaggagaccgccgtgtccgagaggctcagccaaccgccgccttcgctgttc
acggcctcaacaacgctcacggcgcccagcatcgtcacatcatctccgggacacacgggc
ccggatgtcccccgggacaagagtccttcaacctttgtcaacaagtccaagaagaagtca
aaaaaacataaagacaaggaaaagagcaaagacaaggaaagggtgagagaaaaggggaag
gagaagaagagtcgtggggagcgagtgcagctagtgcctgagccgaaacctgcctgtgac
atgagcccagcaaacctcaaaagcaacagtattccacacaaaagcacagatctgaatggg
atgtgcaacagtaccagtattcctacgtcatcacctgaggtgccagactatttatcgaag
tacatggtgatcggctctccggagcagcgtcagaagtataaaaccgatttcaacgccgag
tacagcgagtaccggggtctgcacgctcggatagaaggcatcaccaggcagttcacggtg
ctcgacaacgagctcaaacaactcaaccaaggcacagacaagtacaagacaatccacaat
cagatacttcaagagtatcataaaataaaaaagactaatccaaactatagccaagagaag
aaccgctgtgaatatctacacaacaaactggcacatataaagagacttattgccgagtac
gatcaacagcagctttag

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