Trematomus bernacchii (emerald rockcod): 117495758
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Entry
117495758 CDS
T09643
Symbol
cyldl
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04217
Necroptosis
tben04622
RIG-I-like receptor signaling pathway
tben04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117495758 (cyldl)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117495758 (cyldl)
04625 C-type lectin receptor signaling pathway
117495758 (cyldl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117495758 (cyldl)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117495758 (cyldl)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117495758 (cyldl)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C67
117495758 (cyldl)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117495758 (cyldl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
UCH
PHD_2
Motif
Other DBs
NCBI-GeneID:
117495758
NCBI-ProteinID:
XP_034003144
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MTSTNYLYFIVKTKPQFQGLINAGQICYIKESIYNKKQSVGERSPSSAKLPVFLLGSISN
LDYDIEVSNMDKLSAQEVELLQALPEVEERLTWFREREALQTALGLTLGTPVIVEEGGEK
LRGIIRYIGPITETSLDLISGKFFGIELQGEDRGKGPTDGSYRSTTFFACEKYSGIFAAF
SKVRPVVPSSLSPSVPKHSAQTEAEGLNVGDRVTYFIDDKCRHGMVLYLQGDSVKISTDK
DESGKRGGEVEVPLHEVVKGEVPAEPESMVVDSPPEEPDTEDLYTDLSVNSVVEVTLGDR
NSYGIIRWIGTPLGRQEIMAGLELEEDKGVSDGTIFKERFFSCPNKRALFVKLQSCRPDS
RFQSASADPCKKMPKLEETERETEHSAGKMETVPPISTEQVKHILIGRMKGIQGHCNSCY
MDAALFSLFSCSSVLDSMLFKSTEPQDAPIQRTLLQDIVNPLRSKGFVEGRHIMKLRQQL
QKHGYSHSFTTDEKDPEEFLTVIMHHILALDPLLKLSTGGKVQESYCYQIFLDQNRLLLP
TVQQLLEHSFHTAALKLAEAPSCLILQMPRFGKKYKMFDKIIPSLELDITDLLCEGPQQC
MLCGDLAKLECSDCFKESLFSHTGFKIFCGKCSTQVHSHPQRRSHQPTALDIPKAYLASS
KPHTLIRDKLELFAVLCIETSHYVSFIKHGPNSNDWIFFDSMADRQGESDGFNIPEVHAC
PEVGTYLEMSIAELANQVPRDMKGVAKRLFCDAYMYLYQSPSMCLYR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaacaaattacctgtacttcatcgtaaagacaaaacctcaattccaaggactc
ataaatgctggccaaatatgctacatcaaggaatccatctacaataaaaaacagtcagtc
ggagaaaggtctccatcttctgcaaagttgcccgtcttccttcttggttcaatttcaaac
ttagattatgatatagaggtgagtaacatggataaactgagtgcacaggaagtggagctg
cttcaggccctccctgaagtcgaagagaggctgacctggttcagagagagagaagctctt
caaacagctctgggactcacactgggaactcctgtgattgtggaggaaggaggagagaag
ctcagaggcatcattcgctacattggaccgattacagagacctcattggatctcatttca
ggaaagttctttggcattgaactgcagggggaagacagagggaaggggcccactgatggg
tcctacagaagcacaaccttctttgcctgtgagaaatattcaggcatttttgccgcgttc
tccaaagtcagacctgtggttcccagctccttgtcaccctccgtcccaaagcactctgca
caaactgaagcagaagggctaaacgtgggggatagagtcacctacttcatcgatgataaa
tgtcggcatggaatggtgctgtatctgcagggagattctgttaagatctctacagacaaa
gatgagtctggaaagagagggggcgaagtagaagttccactgcatgaggttgttaagggg
gaggtgcctgcagagccagagagtatggttgttgattcacctccagaggaaccagacact
gaggatctgtatacggatctcagcgtgaactctgtggtggaggtgactctgggtgatcgc
aactcctacggaatcatccgctggatcggcactccgctgggtcgacaggaaatcatggct
ggactagagctggaggaagacaaaggagtgagtgatggtactatctttaaagaacgtttc
ttcagttgtcccaacaagagagctctgtttgtgaagctgcagtcctgccgtcctgactca
cgatttcagagcgcatcagcagatccctgcaaaaagatgccgaaacttgaagaaacagag
agagagacggagcacagtgcagggaagatggagactgtccctcctatcagcacagagcag
gttaagcacattctgattggacggatgaaggggatccaaggccactgcaactcctgctac
atggacgctgcgctcttcagcttgttttcctgctcctctgtgttggactccatgctgttt
aaatcaacagaacctcaagacgccccgattcagagaacactgctccaggacattgttaat
cccctccgcagtaagggctttgtggaagggcgtcacatcatgaagctccggcagcagctg
cagaaacatggctacagtcactccttcaccacggatgagaaggatccagaggagttcctt
actgtcatcatgcaccacattcttgctctggatcctctactcaaactctcaacaggaggt
aaagtgcaggagagttactgctatcagatcttcttggaccagaaccgcctgttgctgccc
accgtgcagcagctgctggagcattccttccacactgcagcactcaagctggcagaggca
ccatcctgcctcatcctccagatgcctcgctttgggaagaaatacaagatgtttgacaag
atcattccctctttggagctggacattactgacctcctctgtgaaggtcctcagcagtgc
atgctgtgtggagacttggccaagctcgagtgctccgactgtttcaaagagtcccttttc
agccacacaggattcaaaatattctgcgggaagtgttcaactcaggtgcactctcaccct
cagcgcaggtcccatcaacccaccgccctggatattcccaaggcttacctggccagcagc
aaacctcacactctgatcagagacaagctggagctgttcgctgtgctctgcatcgagacc
agccactacgtgtccttcatcaaacacggacccaacagcaacgactggatcttcttcgac
agcatggcagacagacaaggagaaagcgacggcttcaacatcccagaggttcacgcctgc
cccgaggtcggcacatacctggaaatgtccatcgcagagctggccaatcaggtgcctcga
gacatgaaaggtgtggccaaacgtctcttctgcgacgcctacatgtacctgtatcagagc
cccagcatgtgtctctatcgctaa
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integrated database retrieval system
