Trematomus bernacchii (emerald rockcod): 117495778
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Entry
117495778 CDS
T09643
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117495778 (hps3)
Membrane trafficking [BR:
tben04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
117495778 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
117495778
NCBI-ProteinID:
XP_034003184
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MVHVYNCHPFASQQIVQVEQEPGLVCCGGGALFVVATGGCKVEAYNVEQEGCPFICRFAT
MGTVKSIQHSKMGDYLVTIEEKNSATYLRAYTNWRYQAEGKARVGVRLLGHLLRGASVRG
GVQMEIIEIPLSKRPVAVACCPVTGDLLVGCEDTLVLFALRRQNQQSLNQSQQILQSTSQ
NSSQNQAQSPSPNQNFLDFERSVILHLPKIEPKQVALCGGYVAVQMELEVLVLKLDASSD
PKTQEESSDTNTTDHIDDQADFMVLPRHQELLGDVAKDCDIPVSIENTGLEDGKGQYTLS
YVLFRRFTPDFFQGCSVEETQLHSLQLYPLYTSNQSVPLEEPACVFCFFSLPNAGYLYSL
KGGVELLSTYQYPEKVLKAVLTDHLLHVITKSALQCFTVRCAAVAARIVDPYIDTTMKAC
PPCSMEVCALRIQLFIGLRSVCVDGSHVILLSVADTETPEEPERTPQRRRLGRKWTISSP
KETSPAGHGWNLYVVDSVSPLTLYQEMVEYSERYAETNPQAQSLRHLLSEAHLFLRASLL
RTEPSEQPRNIEGEAAVTLQTDTDAPAERQTAAQTDRQEVEEALRHNCAQLGDCFSRGSQ
KDCHLALPYYRMSGLSVTEVMARNRPLPSSPHTYGPGFLFYLKHFLFEETEQTLSQEAAD
DVIDIFSQSEPSQLVSVCASPSMINLSPAKTLQILIHQEDTCGVSVLLTITMATMMLCLD
DLPQYTQLMERHAEMLLVYRFIEEPRLLLHGGVGGQHTHIRPTRLTRQLAKSQPGLLVAA
MVALHENSKVQLEQADHIFKELGCENCLQVDFWEAMLMASSQEAVIQELLFRLVSIYIDR
LTNTTSDTHLNEPHTPSRRRPLKSADDLINSCSHYGALYPWLTVLNPAHTTSSQHQEALY
KLQSLLCGPSLSVGSVVPLMERLSEETLWGFSLHLLCSTRRGQYDRSIEKLLDRCPQAII
AYANHQLQDTHMMLWWQKLLPELCNRTRAASDNSILLAALKETLVVVAMEMSPTDFLELI
PDDGTASYFLPYLLTCSQRHLMA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgtctacaactgccatcctttcgcctcacagcagatagtacaggtggagcag
gagcctggactggtctgctgtggagggggagctctgtttgtggtggcgactggaggatgc
aaggtggaggcttacaatgtggagcaggagggctgccctttcatctgtcgctttgccacc
atgggcactgtgaagagcatccagcacagcaagatgggagattacctggttaccattgag
gagaagaacagcgccacttacctgagagcctacaccaactggcgttatcaggcggagggg
aaggcccgggtcggggtgcgtttgttgggccacctgctgcgaggggcgtctgtgcggggc
ggggtgcagatggagatcatcgagatccctctttcaaagcgccctgttgccgtggcatgt
tgtccggtgacaggagaccttctggtcggctgtgaggacactctggtcttgttcgccttg
aggagacagaaccagcagagcctgaatcagagtcagcagatccttcaaagcacctcgcag
aactccagtcagaatcaagctcagtctccaagtccaaaccagaatttcctggattttgaa
cgctcagttatcttgcatctcccaaaaatcgagcctaaacaggtggcactgtgtggaggt
tatgtggcagtgcagatggagctggaggtgctggttttgaaactggatgcatcttctgat
cctaaaacccaggaagaatcatcagacacaaatacaacagatcatatagatgaccaggct
gacttcatggtccttccgagacaccaggagttgctgggtgatgtagctaaagactgtgac
attcctgtcagcattgagaatactgggttggaggacggaaaaggacaatacacgctatca
tatgttctcttcaggcgttttactccagacttcttccagggctgcagtgtggaggaaact
caactccactcactgcagctttacccactgtacaccagtaaccaatccgtgcctctggaa
gaaccagcatgtgtcttctgcttcttctctctcccaaacgctggctacctgtacagtctg
aagggtggtgtcgagcttctctccacctatcagtatccagagaaagtcctgaaggcggtg
ctaacggaccacctgctgcacgtcattacaaagagtgcattgcagtgtttcacagtgcgc
tgtgcagcagtagcagccaggattgtggacccttacatcgacaccaccatgaaggcctgt
ccgccctgcagcatggaggtatgtgcgctcaggattcagctgtttattggtctgcgatca
gtgtgtgtcgacggcagccatgtcatcctgctctccgttgctgacacagagacaccagag
gaacctgaacgcaccccgcaacgcagacgcctgggcaggaaatggacgatctcctctccc
aaagaaaccagcccagcaggacacgggtggaacctgtatgtggtcgacagcgtcagcccc
ctcactctttaccaagagatggtcgaatacagcgagcggtacgcagagaccaacccgcag
gcccaaagccttcggcacctcctgagtgaagctcacctcttcctccgcgcctccttactc
aggacagagccatcagagcagccacgaaacatcgagggtgaagccgccgtgactctgcag
acagatacagacgcaccagctgagagacagacagctgcacagacagacaggcaggaggtg
gaggaggcactcaggcacaactgtgcacagctgggagactgtttcagcaggggcagtcag
aaggactgccatctggccttgccgtactacaggatgtccggtctgtcagtcacagaagtc
atggccagaaaccgcccacttcccagcagccctcacacctacggccctggcttcctgttt
tacctgaagcatttcctgtttgaagaaacagagcagactctcagccaggaggcagctgat
gatgtcatagacattttcagccaatcagagccctcacagctcgtcagtgtgtgtgccagc
ccgtccatgataaacctcagtcccgccaagacgctgcaaatcctaatacatcaggaggac
acgtgtggtgtgtctgttcttctcacaatcaccatggcaaccatgatgctgtgtttggac
gacctgccacagtacacacagctgatggagagacacgccgagatgctgctggtgtacagg
ttcatcgaggagcccaggctgctgctgcacggcggagttggaggccagcacacacacatc
cgtcccacacgactgacccgacagctggcaaagtcccaaccaggactgctggtggctgcc
atggtggctttacatgaaaacagcaaagttcagctggaacaggctgatcacatattcaag
gagctgggctgtgagaactgcttgcaggtggatttctgggaggcgatgctcatggcctcc
tcacaagaagctgtcatccaggagctcctgttccgacttgtgtccatctatattgaccga
ctcacaaacacaacctccgatacacacctcaacgaaccacacacaccttcaagacgaagg
ccgctgaagagcgctgacgatctgataaactcctgctctcattacggtgctctctacccg
tggctcactgttctcaatccagctcacactaccagctcccaacaccaggaggcgctgtac
aaactacagtctctgctgtgtggtccgtctctgtctgtgggctccgtcgtgcctctgatg
gagcgtctgtcagaggaaactttgtggggcttcagcctgcacctcctctgctccaccagg
agggggcagtatgaccgcagcattgagaagctgctggaccgatgtcctcaggccatcata
gcctacgccaaccaccagttacaggacacacatatgatgttgtggtggcagaagctgctc
cctgagctttgtaacaggacgagagctgcttcagacaacagcatcctattggcagccctc
aaagagacgctggttgtggttgccatggaaatgagtccaacagactttctggagctgata
cccgacgacgggacggcctcctacttcctgccttacctgttgacctgcagccagagacat
ttaatggcctga
DBGET
integrated database retrieval system
