Trematomus bernacchii (emerald rockcod): 117495785
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Entry
117495785 CDS
T09643
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117495785 (trpc1)
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117495785 (trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
117495785
NCBI-ProteinID:
XP_034003203
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MLLLHMSFLLELSLLREPYDRSCVFAAIGHIILHSLYGFDFGRKCIPLFHGALSSPGLSG
DYYMVKKLLEENRHGELNLNCVDVLGRDVVTITIENENLDILQLLLEHGCQATDALLVAI
DSEVVGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTML
LKQDISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAF
ELSADLRELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNEDQVDKR
GLLEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVA
MLWPLLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFSFLLLLNLYSLVYNEGKKNTMGP
ALEMIDFLLILWIIGMVWSDVKRLWYQGLEDFLEESRNQLSFVMNSLYLATFALKIVAHS
KFKNVEDTERKNWDAFHPILVAEGLFAFANILSYLRLFFMYTTSSILGPLQISMGQMLQE
FGKFLGLFLLVLFAFTIGLTQLYGKDQKDPDKHPPKDCEGIFCQQQSNDAFHTFMGTCYA
LFWYIFSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLMVAMLHKSFRQIA
NHEDKEWKFARAKLWLSYFDDKCTMPPPFNILPSPKTVVYLVTSMSKWICSHTSKGKVKR
QNSLKEWKNLKQKHDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRN
EMRDLLGFRTSKYAMFYPRS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgttattgttacacatgagcttcctgctggagctgagcctgctgcgtgagccttatgac
agaagctgtgtgtttgctgccatagggcacataatacttcacagcttgtatggatttgac
tttggtcgtaagtgcattcccctctttcacggtgctttgtcttcaccgggtctctcaggc
gactactacatggtgaagaagctgctggaggagaaccggcacggcgagctcaacctgaac
tgcgtggacgtcctgggccgagatgtcgtcaccatcaccatcgagaacgagaatctagac
atcctgcagctcctcctggaacatggctgccaggcgacagatgccctgctggtggccata
gactctgaggtggtgggagctgtggacatcctcctcaaccacaggcccaggagatcctcc
aagccctccattgctaaactgatgcagcggattcagaacccagagtactccaccaccatg
gacgtggctccggtcatcctggcggcccacaggaacaactacgagatcctgaccatgctg
ctgaaacaggacatctctcttccccggccacatgctgtcggctgcgagtgcacgctctgc
aacgctaagaacaaaaaggacagcttacgacactccaggtttcggctggacatctaccgc
tgcctggccagcccctctctgatcatgctgactgaagaagaccccattctcagggccttt
gagctgagtgcagacctccgggagctcagcctggttgaagtggagtttaggaatgattat
gaggaactggcgaagcaatgtaagatgttcgccaaggatctgctggcccaggctcgaaat
tctcgagagctggaagttattctcaaccacacgtccaacgaggatcaggtcgacaagaga
ggcttactggaggagagaatgaacctcagtcgactcaagctcgccatcaagtacaaccag
aaagagtttgtggctcagtccaactgtcagcagttcctcaacaccgtctggtttggagag
acggcgagttaccggcgcaaacacacgtgtctgaagatggccacggtgctcagcgtggcc
atgctgtggcctctgctctccgtctgctaccttctggtgccgcgctctcgcgtcggccag
atcatccacacgcccttcgtcaagttcatcatccacagcgcctcgtacttctccttcctg
ctgctgctcaacctctactcgctggtctacaacgagggcaagaagaacaccatgggccct
gcgctggagatgatagacttcctgctcatcctctggatcatagggatggtgtggtctgat
gtgaagcggttgtggtaccaagggctggaagactttctggaagagtctagaaaccagctg
agcttcgtgatgaactccctttacctcgccacctttgccctgaagatagtcgctcatagc
aagttcaagaacgtggaggacacggagaggaagaactgggacgccttccatcccatccta
gtcgcagagggtctgttcgccttcgccaacatcctcagttacctgcgcctcttcttcatg
tacaccaccagctccatcctggggccgctacagatctccatgggtcagatgctgcaggag
ttcgggaagtttctgggcctcttcttgttggtgttattcgccttcaccatcggactcacc
cagctgtatggaaaggaccagaaagacccagacaagcatccaccaaaggactgcgagggc
attttctgccagcaacagagcaacgatgcatttcacacgttcatggggacctgctacgcc
ctgttctggtacatcttctccctggctcacgtggcgctcttcgtcacacggatcagctac
actgaggaactgcgctctttcgtgggcgccatgatcatcggcacctacaacatcgtggtg
gttatcgtgctgaccaagctgatggtggccatgctccacaagagcttcagacaaattgct
aatcacgaggataaggagtggaagtttgctcgggccaaactgtggctaagctacttcgat
gataagtgcaccatgcctcccccgttcaacatcctcccctccccaaaaactgtcgtgtac
ctggtgaccagcatgagtaagtggatctgctcacacacgtcaaagggaaaggtgaaaaga
cagaacagcctcaaggagtggaagaacctgaagcagaagcatgatgagaactaccagaag
atcatgtgctgtctggttcaccgctacctgacctccacacggcagaagatgcagagcaca
gaccaggccacggtggaaaacctcaacgacctgcgccaagacctgtccaagtttcgcaac
gagatgagggacctgctgggcttccggacctccaaatacgccatgttttaccccaggagc
taa
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