Trematomus bernacchii (emerald rockcod): 117495819
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Entry
117495819 CDS
T09643
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117495819
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
117495819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
COLFI
Motif
Other DBs
NCBI-GeneID:
117495819
NCBI-ProteinID:
XP_034003247
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MLGYKRVIGITALLGWLLLGSCGTGGEEVCDSPLVANLPPSSFRSSSQLTSSHGPVFAKV
NRREGAGGWTPLVSDRYQWLEVDLGKRTRITAVATQGRYGSSDWLTSYLLMFSDTGHNWR
QHRQEDSLGAFPGNSNADTVVQYKLNQPVIARYLRLIPLDWNPTGRIGLRLEIYGCRYTS
DVAYFDGSSSLLYRRSARPSWTGMEVVSLKFKTLTNSGTLLHAEGQRDPSLTLVLEKGRL
LLYHQQGVSSSSSGQLLVSVGSLLDDQHWHHVKLVRLSTHLNLTVDKNTRQVHIPAELSH
WDIHQLSLGAVQSHGLQKPILSNRNFNGCLENFLYNDLNLIHLAKKKNHQVSLLGNVTFS
CAEHVSVAVTFTDSQSFLQVPGLTSWSSGLFSVALQFRTWNKGGLLLTFDLPQQQGTVWL
YLSEARLRLQINKAGRARLELSAGSGLNDGQWHSVELNSEQDLLSITVDKNEGATAHTRT
PLPLTADSQLFFGGCSSSQECRNPFKVFQGCMRLLTLDNQPVDLIKVQQRMLGNYSHLQI
DMCGIIDRCSPSHCEHGGRCTQSWSIFHCNCSNSGYRGATCHSSRYEQSCEAYKHRGNTS
GHYHIDVDGSGPIKPQLIYCNMTEDMAWMVIQHNNTELTRVHSSPERNQHVSHFDYASEE
DQLTAITSQSEHCEQELSYHCRKSRLLNTPEGAPFSWWVGGPGPGQVQTHWGGALPNSRQ
CACGLQDNCLDSNHYCNCDADYDQWANDSGLLTHKETLPVRSLVLGDVRRPGSEAAYRVG
PLRCHGDKNFWNAAFFDKETSYLHFPTLHGELNADISFLFKTTSSSGVFLENLGIKDFIR
IELSSASEVVFSFDVGNGPLEVRVKASVPLNDNRWHSVRAERNVKEASLRLDGFPATTQE
APADGHIHLQLNSQLFIGGTASRQKGFLGCIRSLQLNGVTLDLEERAKITPGVRPGCPGH
CSSYGSLCQNQGRCEERDSGFSCNCDQSAYTGPFCHKEVSASFQSSTSITYNLKEPHELN
RNSSAWPSSIYSDVTLRGENISLSFRTTQSPALLLYVNSVYKEYLALLINNHDELEVWYK
LHSGRDVEVLRSRVTDLADGRLHTVIIRRQADIVSVKVDQNTREDFNLTSDVEFNSVKSL
ILGKVQESGEMDEELAGLASLGFSGCLSGVFFNSISPLKAALLHPDSPVVVSGPLAQSSC
ASSPANPYAAETTHSLSDQPNSVDPGQHLVNAIRSDSALIGGVIGMMIFVSVVALAIIAR
IICSRKETYRNQEVKAAQPEEGQELPFSSQVDSQSAPTENQKEYFI
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgttggggtacaaaagagtcattgggattactgcgctgctcggctggctgctgctcggc
tcctgtgggacaggtggagaagaggtatgtgacagcccgctggtggccaatctgccgcca
tcatcgttcagaagctcctcccagctcaccagcagccatgggccggtctttgcaaaggtc
aacaggagagaaggagctggaggctggacccctctcgtctcggacagataccagtggttg
gaggtggatctggggaagcggacccggatcactgctgttgctacgcagggacgctacggc
agctctgattggctaacgtcttacctgttgatgttcagcgacacaggacacaactggaga
caacatcgacaggaagacagcctaggggcttttccaggtaacagtaatgcagacactgtg
gtccagtacaaactcaatcagccggtgatagctcgctacctccgcctgattcctctggac
tggaaccccactgggaggattggactcagactggagatatacggttgtcgttatacttct
gacgtggcctactttgacggcagcagcagcctgctctacagacgcagcgcgaggccgagc
tggacggggatggaggtcgtctctctgaagttcaaaaccctgacgaattctgggacgctg
cttcatgcagagggacagagagatcccagcctcactctggtgctggagaagggacggctg
ctgctctaccatcaacaaggtgtgagttcctcctccagtgggcagcttcttgtctctgtg
ggcagtctgctggacgaccagcactggcaccatgtgaagctggtgcgcctcagcactcac
ctcaacctcaccgtggacaagaacactcgtcaggttcacataccagccgagctcagccac
tgggacattcatcagctgagtctgggagctgtccagagccatggcctgcagaaacccatc
ctatccaacaggaacttcaatggctgcctggagaactttctctacaacgacctcaacctg
atacacctcgctaaaaagaaaaaccaccaggtctctttgctgggcaatgtgaccttttct
tgtgctgagcatgtgtcagtcgctgtgacgttcaccgactcccagagcttcctgcaggtg
cccggcctgacgtcgtggtcttcagggcttttctctgtggccctgcagtttcgcacgtgg
aacaagggagggcttctcttgacctttgacctcccgcagcagcagggcacagtgtggctg
tacctgagcgaggccagactgcgcctacagatcaataaagccggcagggcccggctggag
ctcagcgcaggctcagggctaaatgatggtcagtggcattctgtggagctgaactcagag
caagatcttctgagcatcacagtggacaaaaacgaaggagccaccgctcacacccgcacc
ccacttcctctaaccgcagacagtcaactcttcttcggtggttgcagcagcagtcaggag
tgtaggaaccccttcaaagtgtttcagggctgtatgcgtctgctgactctggataaccag
ccagttgacctgatcaaagtgcaacaaaggatgctgggaaactacagccacttgcagatt
gatatgtgcggcatcatcgacaggtgctctcccagtcactgtgaacacggaggcagatgc
actcagtcatggagcatcttccactgtaactgctccaacagtggctaccgaggagccacc
tgtcacagctcgagatatgaacagtcatgtgaggcgtacaaacacagaggcaacacatca
ggacattatcacatagacgtggacggcagtggaccaatcaaaccccagctcatctactgt
aacatgacagaggacatggcatggatggtgatccagcacaataacaccgaactgaccaga
gtgcattcgtccccggagagaaaccaacatgtgtcacactttgactatgcttctgaagag
gatcagttaacagcaatcaccagccaatcagagcactgcgagcaggagctgtcctaccac
tgcaggaagtcccgcctcctcaacacgccagagggtgctccgttcagctggtgggtgggg
ggtccgggtccaggtcaggtccagacgcattggggcggggctctgcccaacagccggcag
tgtgcctgtggcctgcaggacaactgtctggattcaaatcactactgcaactgtgacgct
gactacgaccaatgggctaatgactcgggtctgctcacccataaggagaccctcccggtc
aggtctctggtgctgggtgacgtccggcggcccgggtcagaggctgcctacagggtggga
ccccttcgttgtcatggagacaagaacttctggaacgctgcgtttttcgacaaggagaca
tcttaccttcactttcccactctccatggagagctgaatgcagacatctccttcctgttt
aaaacaacatcctcctctggggtctttctggaaaatctgggcatcaaggacttcatccgg
atcgaactcagctctgcctcagaggtcgtcttctcttttgacgtgggaaacgggccgctg
gaagtgcgagtgaaggcgagcgtgccgctgaacgacaaccggtggcacagcgtgcgagca
gagcgaaatgtgaaggaagcatcattacgtttggacgggtttcctgccaccacacaggaa
gctcctgctgacggacacattcatctgcagctcaacagccagctattcataggaggcact
gcgtccagacagaaaggctttctgggctgcatccgctctctgcagctgaacggcgtcact
ctggatctggaggagagggcaaagatcaccccgggggtccgacctggatgcccgggccac
tgcagcagctacggctctctctgccagaaccagggtcgctgtgaggagagagacagcggt
ttctcttgcaactgtgaccagtcggcgtacactggacccttctgtcataaagaggtatcg
gccagctttcagtcgtcaacatccatcacgtacaacctgaaggagccccatgagctgaat
aggaacagcagtgcctggccttcctccatctactctgatgtgacgctgagaggagaaaac
atctccctgagcttcaggacgactcagagtcctgctcttctgctctacgtcaactctgtc
tataaagagtacctggcactgctcatcaacaatcatgatgagttggaagtgtggtacaag
ttacacagcggccgagacgtggaggtgctgaggagcagagtcacggacctggctgatgga
cgtctgcacacggtgatcatcaggagacaggcagacatcgtctctgtgaaggtcgatcag
aataccagagaggatttcaacttgacatctgatgtggaattcaacagcgtcaaatcactc
attcttggcaaagtgcaggagtctggtgagatggatgaagagctggccggcttggcctct
ctcgggttcagcggctgtctgtcaggtgttttctttaactccatcagtcctctgaaagcc
gccctgctgcaccctgacagccctgttgttgtcagcggcccactggcccagtccagctgc
gcctcctctccagccaatccttacgcggcagaaaccacacattccttatcagaccagcca
aattcagtggatccaggtcagcatttagtcaatgccatcaggagtgactcagctctaatc
ggaggggtgatcggcatgatgattttcgtcagcgtggtcgcattggcgataatagccaga
atcatctgcagcaggaaggagacgtatagaaaccaggaagtgaaagcagcgcagccggaa
gagggccaggagctccccttcagcagccaggtggactctcagagcgctcccactgaaaac
caaaaggagtattttatttag
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