Trematomus bernacchii (emerald rockcod): 117495888
Help
Entry
117495888 CDS
T09643
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
tben04144
Endocytosis
tben04145
Phagosome
tben04148
Efferocytosis
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117495888 (rab5b)
04145 Phagosome
117495888 (rab5b)
04137 Mitophagy - animal
117495888 (rab5b)
04148 Efferocytosis
117495888 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117495888 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117495888 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117495888 (rab5b)
04031 GTP-binding proteins [BR:
tben04031
]
117495888 (rab5b)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
117495888 (rab5b)
Endosome - Lysosome transport
117495888 (rab5b)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117495888 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
117495888 (rab5b)
Exosomal proteins of colorectal cancer cells
117495888 (rab5b)
Exosomal proteins of melanoma cells
117495888 (rab5b)
GTP-binding proteins [BR:
tben04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
117495888 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
B12-binding
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
117495888
NCBI-ProteinID:
XP_034003360
LinkDB
All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
MSSRGSGGRTNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPDTFERAKAWVKELQ
RQASPNIVIALAGNKADLAERRLVEYEDAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSNRACCGGN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagagggagtggaggccgcaccaacggcacactgccacaaaccaagatctgc
cagttcaagctggtgctgctgggggacatggcggtgggcaagtccagcctcgtgctgcgt
ttcgtcaaagggcagtttgacgagttccaggagacgaccataggagcggcgttcctggct
cagtcggtgtgtttagacgacaccacggtgaagtttgagatctgggacacggcgggacag
gagcgctaccacagcctcgcccccatgtactacagaggagctcaggccgccatcgtggtc
ttcgacatcaccaagccggacacctttgagcgagcgaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacatcgtgatcgctctggctgggaacaaggcggacctggcagag
aggagactagtggagtacgaggacgcccagacgtacgctgaagacaccggcttgctcttc
atggagacctctgctaaaacagccatgaacgtcaatgagctcttcctggctattgcaaaa
aagatgccaaaaacagacacccagaaccccacacatgcagcgcgacaccggggagtgaac
ctccaggatccggacgcccactccaaccgagcctgctgcggggggaactaa
DBGET
integrated database retrieval system