KEGG   Trematomus bernacchii (emerald rockcod): 117495888
Entry
117495888         CDS       T09643                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04137  Mitophagy - animal
tben04144  Endocytosis
tben04145  Phagosome
tben04148  Efferocytosis
tben05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117495888 (rab5b)
   04145 Phagosome
    117495888 (rab5b)
   04137 Mitophagy - animal
    117495888 (rab5b)
   04148 Efferocytosis
    117495888 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117495888 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tben04131]
    117495888 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117495888 (rab5b)
   04031 GTP-binding proteins [BR:tben04031]
    117495888 (rab5b)
Membrane trafficking [BR:tben04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    117495888 (rab5b)
 Endosome - Lysosome transport
    117495888 (rab5b)
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117495888 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   117495888 (rab5b)
  Exosomal proteins of colorectal cancer cells
   117495888 (rab5b)
  Exosomal proteins of melanoma cells
   117495888 (rab5b)
GTP-binding proteins [BR:tben04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    117495888 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 B12-binding Tfb2_C
Other DBs
NCBI-GeneID: 117495888
NCBI-ProteinID: XP_034003360
LinkDB
Position
Unknown
AA seq 216 aa
MSSRGSGGRTNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPDTFERAKAWVKELQ
RQASPNIVIALAGNKADLAERRLVEYEDAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSNRACCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctccagagggagtggaggccgcaccaacggcacactgccacaaaccaagatctgc
cagttcaagctggtgctgctgggggacatggcggtgggcaagtccagcctcgtgctgcgt
ttcgtcaaagggcagtttgacgagttccaggagacgaccataggagcggcgttcctggct
cagtcggtgtgtttagacgacaccacggtgaagtttgagatctgggacacggcgggacag
gagcgctaccacagcctcgcccccatgtactacagaggagctcaggccgccatcgtggtc
ttcgacatcaccaagccggacacctttgagcgagcgaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacatcgtgatcgctctggctgggaacaaggcggacctggcagag
aggagactagtggagtacgaggacgcccagacgtacgctgaagacaccggcttgctcttc
atggagacctctgctaaaacagccatgaacgtcaatgagctcttcctggctattgcaaaa
aagatgccaaaaacagacacccagaaccccacacatgcagcgcgacaccggggagtgaac
ctccaggatccggacgcccactccaaccgagcctgctgcggggggaactaa

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