Trematomus bernacchii (emerald rockcod): 117495889
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Entry
117495889 CDS
T09643
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117495889 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tben03009
]
117495889 (rexo1)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
Pre-60S particles
RNases
117495889 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
117495889
NCBI-ProteinID:
XP_034003363
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MLRSTGFFRGLDCPFYAEYSEEKGIKNGCNRPYCHFRHSSQRRASYGAPADVKKQRDLHS
AQKEQGYDPFNPEVVRPQEQKNGEPAPSGDLDGALDLVNKAIEEVRSEVEREKRKLSRIG
DEPYQPSKSKKLSSSDVVKRKKPPSHMAYDPGSYQMTSGGYNPTPGCSKYTLDFDNQGKN
SNSMEYVPALVRKPSSRTNTHQLPSPPHSPKYSTSTSSPKCKYTLDNLKPTTDMEYDPMS
NYSSGIAAKSKRPEKTQAVKMGQRKTHKLSEMSDEEYVVAVKKPRPSIDSKKYIISDSEE
ESSGTEYRPTSLSNLQQRKGNSGSLWITGGKQRKERTESMLNALTQRNKEDSDSDVQEFI
IQTDSFEKKKVASQTSHEKIGKSEKVQKLVKEANKKIGSKSSSSSSKDKGSIKNSNQDSA
KKENKSQEKRDDRKNIIKVKTPNKVQKEGKEEMRSDGKIKAVEKVKTDSCKRDKDTENGA
RESKKPKISEKEKEYNKYKDRQQKNGKLDSSKRENDTKKMNKSSSIGGSSGSHSKGTSAI
NKDRLKQNSSSSNGKKPKEKQPTHSHADLFGDESPDEVEAIVVDDDDDDYDDDEEEVLVR
KSADALKRGRLNKRKASEMTPSSSEDEGDQGGEDEVDDVEMDFSSFQEDLDFDSDPMEEC
LRIFNESKDVKTEDKGRQAKQPYRDSDEEGDTESTLTTLFPGQKKRVSHFGAKTDAPVAR
PNKRLSAQAVCYQRMQMAQQQAAQLSASVKASRQSSIPSVSGEKKRIAHRTFPPTTSSKT
SPADVRPAASRVLSPSQTHQVKPQTTAGILTKTTSTIMQKRVAHTPTMKSSSMKRPIIPI
EFGAKVPNNVRQRYLNTFIDECVKFCRPKGAAFQMALDEEKLVYDRSNSKSIYLNIAVNT
LKKLRGKSSSGPSPAVTKDPGSVNSRRVLSHEDLLGGRLAAKTSFTINRMGKQQEEKLIG
VTLYRKLQAYLMSEEQLQENGYPRTSPEASGKAIICNLPEKKAVTDPFNKICCRCGAEYK
INAHGNCVRKEECCFHWGRLRRHKVSGGWETNYSCCAAGVGAPGCQVCKQHVQDGRKESF
DGYVTTFSKSLPPDGNGGVFALDCEMCYTRHGLDLTRVTVIDSEMKVIYDTFVRPEAKVV
DYNTRFSGVTEEDLENATITLRDVQAVLLSMFSAESILIGHSLESDLLALKLIHSTVVDT
AIVFPHRLGAPFKRALRNLMADHLKRIIQDNVNGHDSSEDASACLELMLWRIKEDAKVKR
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgctaagatccaccggcttcttccgggggcttgactgcccgttttacgcagaatacagc
gaggaaaaaggcatcaaaaatgggtgtaacagaccgtactgtcacttcagacacagctcg
cagcgacgggcgtcctacggagctccggcagatgttaaaaagcaaagagacctccactcc
gcacagaaagaacaaggttatgatcccttcaacccagaagtggtgaggccccaggagcag
aagaatggagagccggctccttcaggagacctcgatggtgcgctggacctcgtcaacaag
gccattgaggaggtccgcagcgaggtggagagggagaagaggaagctctctcgcattggg
gatgaaccgtaccaaccaagcaagagtaaaaagttgtcttcgtctgatgttgttaagaga
aaaaaaccgccatcacatatggcttatgaccctgggagttatcagatgacatcagggggg
tataatcccacccctggctgcagcaagtatactttggatttcgacaaccaggggaaaaat
agcaactctatggaatatgttcctgctttggtgagaaagccttcatctcggacaaacaca
caccaactcccttctcctccccatagtccaaagtactcaaccagcacatcgtcccccaag
tgtaaatacactctggacaatttaaaaccaactacagatatggagtatgacccaatgtcc
aactattcgtcaggaattgcagcgaaaagcaaaaggcccgagaaaacacaagctgttaag
atggggcaaagaaagacacacaaactatcagaaatgtcagacgaggagtatgttgtagct
gtcaaaaagccccggccgagtatagactctaaaaaatacattatatctgactctgaggag
gagagctccggcacagagtatcgacccacgtcgcttagcaatctccagcagagaaaaggc
aacagtgggtcactttggatcactggtgggaagcagagaaaagagagaactgaaagtatg
ctaaatgcattgacacagaggaacaaagaggactccgactcagatgtccaggaatttatt
atacaaacagacagtttcgagaaaaagaaggtggctagtcaaactagtcacgagaaaatt
ggcaaatctgagaaagtgcaaaaactcgtaaaggaagctaacaaaaagattggtagtaag
agtagcagtagcagcagtaaagacaaagggtcaataaagaactcaaaccaggactctgca
aagaaggagaacaagagtcaggaaaaaagagacgataggaaaaacatcattaaggttaaa
acacctaataaagttcagaaggaagggaaagaggaaatgagaagcgatggtaagatcaaa
gctgtggaaaaagtcaaaactgattcctgcaaaagggataaagatacagaaaatggtgca
agggaaagcaaaaaacccaagatatcagagaaggaaaaggaatacaacaagtataaggac
cgccaacagaaaaatggtaaacttgatagcagtaaaagagaaaatgatacaaagaaaatg
aataaaagcagttctattggtgggagcagtggtagtcacagtaaagggacttcagcaata
aataaagataggctgaagcagaacagcagctcatcaaatgggaaaaaacccaaagagaaa
cagccgactcatagccacgctgatctgtttggagatgagagtccagatgaggttgaagca
attgtagtggatgatgatgatgacgattatgacgacgatgaggaggaagtgcttgtgagg
aaatcggcagatgctttgaaaaggggacgcctgaacaagagaaaagcgtcagagatgacg
ccttcttcctctgaagatgaaggggaccagggtggggaggacgaggtggacgatgttgaa
atggacttctctagtttccaggaggatctggactttgactcagatcccatggaggagtgt
ttacggatctttaatgaatccaaggatgtgaagacggaagacaagggaaggcaggctaaa
cagccctacagggattcagacgaggaaggggacacagagagcactttaaccactcttttt
cccggtcaaaagaagagagtctcccattttggtgccaaaactgacgcacctgttgctcga
ccaaacaagagactctcagcccaggcggtctgctaccagcgtatgcagatggcgcagcag
caagccgctcagctctctgcttcagtgaaagcttcccgacaaagctccattcccagcgtc
tctggagagaagaagagaatagcccaccgtaccttcccaccgacaacttcctccaaaaca
agtcctgcagatgttagaccagctgccagtcgagtgttatcccccagccagacccatcaa
gtgaagccccaaaccaccgcgggcatcttaaccaagaccacgtccaccatcatgcagaag
agggtggcacacacccccaccatgaagagtagttctatgaagcgccccatcatccccatt
gagtttggggccaaagttccaaacaacgtccggcagcgctacctcaacactttcatagac
gaatgtgtcaaattttgccgaccaaagggtgctgctttccaaatggcgcttgacgaggag
aagctggtgtatgatcgcagcaacagtaagagcatctacctcaacatagctgtcaacact
ctgaagaagctacgcggcaagagcagctccggtccatcaccggcggtcaccaaggacccg
gggtcagttaactccaggagggttctgtcccacgaggaccttctcggaggccgtcttgct
gcgaaaactagcttcaccatcaacaggatgggtaaacagcaggaagagaaactcattgga
gtcacactgtacaggaagctgcaggcgtacttgatgagtgaggagcagctccaggagaac
ggatacccgaggacaagcccagaggcttccggaaaagccatcatctgcaacctcccagag
aagaaggctgttacagaccccttcaacaagatatgctgtcgatgcggagccgagtataag
atcaatgcccacggcaactgtgtacggaaagaggagtgttgctttcactgggggcgactg
cgcagacacaaagtctctggaggctgggagacaaactacagctgctgcgctgcaggtgtc
ggtgctccaggttgccaagtttgcaagcaacacgttcaggacgggcgtaaagagtcattt
gacggctacgtgacaacgtttagtaaatctctgccaccagacggaaatggaggagtgttc
gctttggactgtgagatgtgttacacaaggcacggcctggatctgacgagggtgaccgtc
atcgactctgagatgaaagtcatctacgacacatttgtcagacctgaagccaaagtggtc
gactacaacacacgattttcaggtgtgacggaggaggacttggagaacgccaccatcact
ctgagagatgtccaggccgtgctgctcagcatgttcagtgcagagtccatcctcatcgga
cacagtctggagagcgacctgctcgctctgaagctgatccacagtacagtagtagacacg
gccattgtgttccctcaccgcctcggtgcacccttcaaacgagccctgaggaacctcatg
gccgaccacctcaaacgcatcatccaggacaacgttaacggccacgactccagtgaagat
gcgtcagcctgcttggagctgatgctgtggaggatcaaggaggatgccaaggtcaaaaga
tga
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