Trematomus bernacchii (emerald rockcod): 117495921
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Entry
117495921 CDS
T09643
Symbol
ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03013
Nucleocytoplasmic transport
tben03015
mRNA surveillance pathway
tben03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117495921 (ncbp2)
09122 Translation
03013 Nucleocytoplasmic transport
117495921 (ncbp2)
03015 mRNA surveillance pathway
117495921 (ncbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117495921 (ncbp2)
03041 Spliceosome [BR:
tben03041
]
117495921 (ncbp2)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
117495921 (ncbp2)
Spliceosome [BR:
tben03041
]
Common components
Common spliceosomal components
Cap binding complex
117495921 (ncbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
117495921
NCBI-ProteinID:
XP_034003412
LinkDB
All DBs
Position
Unknown
AA seq
164 aa
AA seq
DB search
MSAKLNALHSDSYVDISQYRDQHFKGNRYEQEKLLKQSHTLYVGNLSFYSTEDQVHDIFS
KGGDVKRIIIGLDKVKKTACGFCFVEYYTRTGAENAMRFINGTRLDDRIIRTDWDAGFKE
GRQYGRGKSGGQVRDEYRQDYDPARGGYGKLASQHRGAEVQNSF
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaaattaaacgcgttgcatagcgactcttatgttgatatcagtcaatacaga
gaccaacattttaagggtaaccgctatgaacaggagaagctgctgaagcaaagccacact
ttgtatgttgggaatctctccttctactccacagaggaccaggtacacgatatcttctct
aaaggtggagacgtcaagcgcatcatcattggtctggataaagtgaaaaagacagcctgt
ggattctgctttgtagaatactacactcggacaggagcagaaaacgccatgcgcttcatt
aacggcacacggctggacgaccgtatcatcaggacagactgggacgccggcttcaaggag
ggacggcagtacggccgcggcaagtctggaggacaggtgagagatgagtacaggcaggac
tacgatccggccagaggcggctacggtaagctggcttcgcaacatcgaggcgcggaggtt
cagaatagtttttaa
DBGET
integrated database retrieval system
