KEGG   Trematomus bernacchii (emerald rockcod): 117495941
Entry
117495941         CDS       T09643                                 
Name
(RefSeq) cullin-1
  KO
K03347  cullin 1
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04110  Cell cycle
tben04114  Oocyte meiosis
tben04120  Ubiquitin mediated proteolysis
tben04141  Protein processing in endoplasmic reticulum
tben04310  Wnt signaling pathway
tben04340  Hedgehog signaling pathway
tben04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117495941
   04120 Ubiquitin mediated proteolysis
    117495941
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    117495941
   04340 Hedgehog signaling pathway
    117495941
   04350 TGF-beta signaling pathway
    117495941
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    117495941
   04114 Oocyte meiosis
    117495941
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117495941
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     117495941
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 IntS11_C
Other DBs
NCBI-GeneID: 117495941
NCBI-ProteinID: XP_034003454
LinkDB
Position
Unknown
AA seq 776 aa
MSSNRTQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSS
QGRGSVPPAKPPKKSTTPGGAQFVGLELYKRLKEFLKNYLTSLLKDGEDLMDECVLKFYT
QQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQVT
NAVLKLIERERNGETINTRLISGVVQSYVELGLNEEDAFAKGPTLSVYKEYFECQFLTDT
ERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL
EIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIHNQGLAAIEKCGEAAL
NDPKVYVQTTLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTRMAQSSSKSPE
LLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSA
SDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQVL
SSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKNRYT
LQASTFQMAILLQYNTEDSYTVQQLTDSTQIKTDILVQVLQILLKSKLLVMEDENANVDE
VEFKPETVIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMK
MRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgtcgtcgaacaggacccaaaacccccacggactgaaacagataggcctggaccagata
tgggacgacctgcgggcgggcatccagcaggtttacacacggcaaagcatggccaagtcg
cgctacatggaactctacacacatgtatataactattgtaccagtgtgcaccagtccagc
cagggccggggctccgtgcctccagccaagccccctaaaaagtccaccaccccgggcgga
gctcagtttgtaggcctggagctctacaagcggctcaaagagttcctgaagaactatctg
accagcctgcttaaggatggcgaggatctaatggacgagtgtgtgttgaagttttacacc
cagcagtgggaggattaccgtttctccagtaaagtcctcaacgggatctgcgcctacctc
aaccgtcactgggtcagacgagagtgtgacgagggacgcaagggcatctacgagatctac
tcgctggcacttgtgacctggagagaatgtttattccgacctctcaacaaacaggtaaca
aacgctgtgctgaagctgattgagcgggagcggaatggcgagaccattaacacccggctg
atcagcggggtggttcaatcctacgttgagctgggtctgaacgaggaggacgccttcgcc
aaaggccccacgctgtccgtgtacaaggagtactttgagtgtcagttcctcacggacaca
gagcgcttctacacccgcgagagcaccgagttcctgcagcagaaccccgtcaccgagtac
atgaagaaggcggaggctcgtctgctggaggagcagcggcgtgtgcaggtgtatctccac
gagtccacacaagacgagctggcccggaagtgtgagcaggtcctgatcgagaagcacctg
gagatcttccacaccgagttccagaacctgctggacgccgacaagaatgaagacctgggc
cggatgtacaacctggtgtcccgcatcacagatggcctcggagaactgaagaaacttctg
gagactcacatccacaaccagggcctggctgccatcgagaagtgtggagaggccgcgctc
aacgaccccaaagtgtacgtgcagaccacgctggacgtccataagaaatacaacgccttg
gtcatgtctgccttcaacaacgacgccggctttgtggcagcgctcgataaggcgtgtggt
cgcttcatcaacaacaacgccgtcaccaggatggctcagtcctccagcaagtctccagag
ctgctggccagatactgcgactctctactgaagaagagctctaaaaatccagaggaagca
gaactggaggacacactcaaccaagtgatggttgtgttcaagtacatcgaggacaaagat
gttttccagaagttttacgctaagatgctggccaaacgtctggtccaccagaacagcgcc
agcgacgacgccgaggctagcatgatctccaaactcaagcaagcatgcggcttcgagtac
acgtccaaactgcagcgcatgttccaggatattggagtcagtaaagacctgaacgaacaa
ttcaagaaacacctgaccaactctgagcctcttgacttggacttcagtatccaggtcctc
agctctgggtcttggcctttccagcagtcctgcaccttcgctctgccttccgagctggag
cgaagctatcagcgcttcactgcattttacgccagcagacacagcggcaggaagctcacc
tggctctaccacctgtccaaaggagagctggtcactaactgcttcaagaacaggtacacg
ctgcaggcctccaccttccagatggccatcctgctgcagtacaacacagaggacagctac
accgtgcagcagctgaccgacagcacgcagatcaaaactgacattctggttcaagttctg
cagattttgttaaaatccaagctgcttgtgatggaagacgagaacgccaacgtggacgag
gttgagttcaaacccgagaccgtcatcaaactcttcctgggatacaagaataaaaagctg
agggtgaacatcaacgtaccgatgaagacggagcagaaacaggagcaggagacgacccac
aagaacattgaagaggaccggaagctcctcatccaggcggccatagtgcggatcatgaag
atgaggaaggtcctgaagcaccagcagcttctggctgaagtcctgaatcagctgtcgtct
cgattcaaacccagagtcccagtcatcaagaaatgcatcgacatcctgatcgaaaaggag
tacctggagagagtggacggagagaaggacacgtacagctacctggcctga

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