Trematomus bernacchii (emerald rockcod): 117495965
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Entry
117495965 CDS
T09643
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117495965 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117495965 (hspd1)
03110 Chaperones and folding catalysts [BR:
tben03110
]
117495965 (hspd1)
03029 Mitochondrial biogenesis [BR:
tben03029
]
117495965 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117495965 (hspd1)
Enzymes [BR:
tben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
117495965 (hspd1)
Messenger RNA biogenesis [BR:
tben03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
117495965 (hspd1)
Chaperones and folding catalysts [BR:
tben03110
]
Heat shock proteins
HSP60 / Chaperonin
117495965 (hspd1)
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
117495965 (hspd1)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117495965 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
117495965 (hspd1)
Exosomal proteins of breast cancer cells
117495965 (hspd1)
Exosomal proteins of colorectal cancer cells
117495965 (hspd1)
Exosomal proteins of bladder cancer cells
117495965 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
117495965
NCBI-ProteinID:
XP_034003485
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MFRLPTIMKQVRPVCRALAPHLTRSYAKDVKFGAEARALMLQGVDLLADAVAVTMGPKGR
NVIIEQSWGSPKVTKDGVTVAKSIDLKDRYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDIISKGANPVEIRRGVMMAVETVIKELKNLSRPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINSAKGQKCEFQ
DAYILLSEKKISTVQSIVPALELANQNRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLRDMAVATGGTVFGDDAVGLALEDIQAHDFGKVGEVQITKDDCLLLKG
GGSIADVDRRAAEIIEQLENCTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPCLDSIPTANADQKIGVEIIRRALRIPAMTIA
KNAGVEGALVVEKILQLGGEIGYDAMLGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAECVVTEIPKEEKEMSGGMGGMGGMGGMGGMGGGF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtctcccgaccatcatgaagcaggtgcggcccgtgtgccgtgcgctcgcccct
cacctcacccgatcctacgccaaagacgtgaagttcggagctgaagctcgagctctgatg
ctgcagggagtcgacctgctggccgacgctgtggccgtcaccatgggccccaagggtcgc
aacgtgatcatcgagcagagctggggcagcccgaaggtcacgaaggacggcgtgacggtg
gccaagagcatcgacctgaaggacaggtaccagaacatcggagccaagctggtgcaggac
gtggccaacaacaccaacgaggaggctggcgacggcaccaccaccgccaccgtgctcgcc
cgcgccatcgccaaggagggcttcgacatcatcagcaagggagccaaccccgtggagatc
cgcagaggagtcatgatggccgtggagaccgtcatcaaggagctgaagaacctctccagg
ccggtcaccacgcccgaggagatcgcacaggttgccacaatctcagccaacggagacgtg
gagatcggtaccatcatctctaacgccatgaagaaagtcggccgcaagggagtcatcact
gtcaaggacgggaagaccctgcacgacgagctggagatcatcgagggaatgaagtttgac
cgcggatacatctccccttacttcatcaactctgccaaaggtcagaagtgtgagttccag
gacgcctacatcctgctgagcgagaagaagatctccaccgtgcagagcatcgttcccgct
ctggagctcgccaaccagaaccgcaaacctctggtgatcgtggccgaggacgtggacgga
gaggcgctcagcaccctggtgctcaacaggctgaaggtggggctccaggttgtggctgtt
aaggctccagggttcggagacaacaggaagaaccagttgagggacatggccgtcgccacc
ggaggaaccgtgtttggagacgatgctgtgggtctggctctggaggacatccaggctcat
gacttcggtaaggtgggcgaggttcagatcaccaaagacgactgcctgctgctgaagggc
ggcggcagcatcgctgacgtagacagacgagcagctgagatcatcgagcagctggagaac
tgcaccagcgactacgagaaggagaagctcaacgagaggctcgccaagctctctgacgga
gtggccgtgctcaagattggaggaacgagtgacgtggaggtgaacgagaagaaggaccgt
gtgacggacgctctgaacgccacgcgggcggcggtggaggagggcatcgtgccgggcggc
ggctgcgctctgctgcgctgcatcccatgcctggactccatccccacggccaacgctgac
cagaagatcggtgtggagatcatccgacgggcgctgcgtatccccgctatgaccatcgcg
aagaacgccggtgtggagggcgctctggtggtggagaagatcctgcagttgggaggcgag
atcggatacgacgccatgctgggagagtacgtcaacatggtggagaagggcatcatcgac
cccaccaaggtggtgaggacggcgctgctggacgctgcaggagtcgcttctctgctctcc
accgctgagtgcgtggtgacggaaatccccaaggaggagaaggagatgtccggaggaatg
ggaggcatgggaggaatgggaggcatgggaggaatgggaggtggtttctaa
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