Trematomus bernacchii (emerald rockcod): 117495977
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Entry
117495977 CDS
T09643
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117495977 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117495977 (taf4b)
03036 Chromosome and associated proteins [BR:
tben03036
]
117495977 (taf4b)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117495977 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
117495977 (taf4b)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117495977 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
T7SS_ESX_EspC
Motif
Other DBs
NCBI-GeneID:
117495977
NCBI-ProteinID:
XP_034003512
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MSTNKVGFGPPKLESCWASGDGDHSVQVKIVQVPTTCNPSTVIAPPKIITASQVHQTTSS
TVLTARHTSSPSVMVVSKVIGGVSAKIQPQVTKAALSQVASMTQATTQGRTVVITVPRAT
GPQPVIVAPRMPHTTSTQLPANFQIPPGMMLIRSESGQLMLVSQQALAQAQQAPRGVGGQ
APKILVPQVSAAAGNKSNEKVTVIRLTAPPSFQPAPVQKTAMVKVMGVAAKPAVVQPLSA
VSERGGQPRIQTVVTETKKDPAGAVSQATLESVKKCKNFLVTLIKLASSDSRSPNMANNV
RGLVRSLLEGKLEAEEFTEQLYRELKSTPQSCLVPFLKKSLPAVRRLTADPQLFIQQAST
PVRSDNNTNNNNNTLLTTMKQNSTVTGHSLSTSLKVTQQPRAVTLTSGLVTFAQPRIDMS
KISKPSPRNFTGTFTLKQPVIQDRPTKFAFKDSSGSYKEDDDINDVASMAGVNLREENAQ
ILISVVGSVVQSCQDQPFLSPPPLLSRILRTGQGLGLTEVGPEVGALVSHATLEFLRGLL
EKLTVMADHRKAALKEDCWHSKVSDVRSQLRFLEEVESLKKKRKDDEERERLLRLARSRS
HTEDPQLLLLKQRAKEMQQIEQAQVQQREANLTALAAIGPRRKRPLELTEGQVPVLPRQC
VQRVSRVMLRDLLLCMEQDRFLRHSLTLYKAML
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaaataaagtgggttttggacccccaaagctggagtcgtgttgggcatcaggg
gacggagaccactcggttcaagtgaagattgtacaggtcccaaccacatgtaaccccagc
actgtcatagccccacctaaaatcatcaccgccagccaagtccaccaaaccacctcctcc
acagtgctgacagccagacacacttcctctccttctgtcatggtggtatcaaaggtgatc
ggaggagtgagtgctaaaatccaaccacaggtaacaaaagcagctttgagccaggttgcc
tccatgacccaggccacaacccaaggaaggacggtggttataacagtacccagggcaacg
ggtcctcagccagtcattgtggccccccggatgccacacaccacctcaacacagctccct
gccaatttccagataccaccaggtatgatgttgatccgcagcgagagtggtcagctgatg
ctggtatcccagcaggctttggcacaggcccagcaggcaccaagaggcgtcggtggtcaa
gcaccaaaaatactggtccctcaggtatctgcagcagctggaaataagagtaatgagaag
gtgacggtgatcaggctgaccgcccctcccagtttccaaccagctccagtccagaagaca
gctatggtgaaggtgatgggtgtagctgccaaaccagccgtagtgcagcccctcagcgct
gtgtctgaacgggggggccagccccgtattcagactgtcgtcacggaaaccaagaaggat
ccagcaggcgctgttagtcaggccaccctggagagtgtgaagaagtgcaagaacttcctg
gtcactctgatcaagctggcctccagtgactcccggtcacccaacatggccaacaacgtg
cgcggactggtccggagtctgctggaggggaagctggaagcagaggagttcacagagcag
ctctatcgagagctgaagtcgactccacagtcctgcttggtgccttttctcaagaaaagt
cttcctgcagttcgtcgcctcactgcagacccgcagctatttatccaacaggcttcaact
cctgtccgcagcgacaacaacactaataacaacaacaacactctgctgaccaccatgaag
cagaacagcactgtcacaggacacagcctcagtaccagcctgaaggttacccagcagcct
cgagccgtgactctgacatctgggttggtgacttttgctcagcccagaattgacatgtct
aagatcagcaaacccagccccagaaacttcacaggaacatttacactgaagcagcccgtc
attcaggatcgtcccaccaagtttgctttcaaggacagctcaggatcttacaaagaagat
gatgacatcaatgacgtggcctccatggcgggagtgaacctgcgggaggagaacgctcag
atcctgatctcagtggtgggctccgtggtgcagtcctgccaggaccagcccttcctgtcc
cccccaccactgctcagccgcatcctgcgcacaggtcagggtctggggctgacggaggtg
ggtccggaggtgggggctctggtgtctcatgccacactggagtttctgcgggggctgctg
gagaagctcaccgtgatggcagaccaccgcaaggcagccctgaaggaggactgttggcat
agcaaagttagcgatgtgcgctcccagcttcgcttcctggaggaagtggagagtttgaag
aagaagaggaaggatgacgaggagagagagaggctgctgcgattggccagaagtcgctct
cacactgaagacccacagcttctgctgctcaagcaaagagccaaagagatgcagcagata
gaacaggctcaggttcagcagagagaggccaacctcacggctctggctgccatcgggccc
cgcaggaagaggcccctggagctcactgagggccaggtgcctgtgctgcccaggcagtgt
gtacagagagtgtcccgggtcatgctgagggatctgctgctgtgtatggagcaggatcgc
ttcctccgccattctctcaccctgtacaaagccatgctctga
DBGET
integrated database retrieval system
