KEGG   Trematomus bernacchii (emerald rockcod): 117496011
Entry
117496011         CDS       T09643                                 
Name
(RefSeq) tubulin alpha-1B chain-like
  KO
K07374  tubulin alpha
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04145  Phagosome
tben04210  Apoptosis
tben04530  Tight junction
tben04540  Gap junction
tben04814  Motor proteins
tben05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117496011
  09143 Cell growth and death
   04210 Apoptosis
    117496011
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117496011
   04540 Gap junction
    117496011
  09142 Cell motility
   04814 Motor proteins
    117496011
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117496011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tben03019]
    117496011
   03036 Chromosome and associated proteins [BR:tben03036]
    117496011
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tben04812]
    117496011
   04147 Exosome [BR:tben04147]
    117496011
Messenger RNA biogenesis [BR:tben03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117496011
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117496011
Cytoskeleton proteins [BR:tben04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117496011
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117496011
  Exosomal proteins of other body fluids (saliva and urine)
   117496011
  Exosomal proteins of colorectal cancer cells
   117496011
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 117496011
NCBI-ProteinID: XP_034003560
LinkDB
Position
Unknown
AA seq 455 aa
MRECLSIHVGQAGVQIGNTCWELYCLEHGIQPDGRKPGDQTYLNISGGGGDDSFNTFFME
TGTGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELI
DTVMDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAP
QVSTAVVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICCRKLDIERPSYTNLNRLMSQIV
SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISTEKAYHEQLSVAEITHSC
FEPANQFVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI
NYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE
GEFSEAREDMAALEKDYEEVGADSLGDEDEEGEEY
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgcgcgagtgcctctcaatccacgttggtcaggctggtgtgcagattggcaatacctgc
tgggagctttactgcctggaacatgggatccagccggacggcaggaagcctggtgaccag
acctacctgaacatctcaggaggaggaggggatgattccttcaacaccttcttcatggag
actggaactggaaagcacgtccccagagcagtgtttgttgacctggagcccactgtcatc
gatgaggtgcgcacggggacttaccgccagctgttccaccctgagcagctgatcactggc
aaggaggatgctgccaacaactacgcccgaggacactacaccatcggcaaggagctcatt
gacacagtgatggacagaatccgaaagctgtccgaccagtgcaccggtcttcagggtttc
ctggttttccacagcttcggagggggcaccggctctggtttcacctccctgctgatggag
cgtctgtccgtcgactacggcaagaagtccaaactggagttctccgtctacccagctccc
caggtgtccactgctgtggtggagccctacaacgccatcctgaccacccacaccaccctg
gagcactctgactgtgccttcatggttgataatgaggctatttatgatatctgctgtaga
aagcttgatattgagcgtccctcttacacaaacctgaacaggttaatgagtcaaattgtg
tcctccatcactgcctcccttcgttttgatggtgccctcaatgttgatctgacagagttc
cagaccaacttggtgccctatccccgtatccacttccctctggccacctatgcccctgtc
atctccacggaaaaagcttaccatgagcagctctcggtggcagaaatcactcattcctgt
ttcgagccagccaatcagtttgtgaaatgcgacccacgccacggtaaatacatggcctgc
tgccttttgtatcgtggtgatgtcgttcccaaagatgtgaacgctgccattgccaccatc
aaaaccaagcgctccatccagtttgtggactggtgccccactggtttcaaggtgggcatc
aactaccagccgcccactgtagttcctggtggagacctggccaaggtccagagggctgtg
tgcatgctgagcaacaccactgctattgcagaggcctgggctcggcttgaccacaagttt
gatctgatgtacgcaaagcgtgcctttgtgcactggtatgtgggtgagggtatggaggag
ggagagttctctgaggccagggaggacatggccgctctggagaaagattacgaggaggtt
ggagctgatagcctgggagatgaggatgaggaaggagaggagtattag

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