Trematomus bernacchii (emerald rockcod): 117496011
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Entry
117496011 CDS
T09643
Name
(RefSeq) tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04145
Phagosome
tben04210
Apoptosis
tben04530
Tight junction
tben04540
Gap junction
tben04814
Motor proteins
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117496011
09143 Cell growth and death
04210 Apoptosis
117496011
09144 Cellular community - eukaryotes
04530 Tight junction
117496011
04540 Gap junction
117496011
09142 Cell motility
04814 Motor proteins
117496011
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117496011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117496011
03036 Chromosome and associated proteins [BR:
tben03036
]
117496011
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117496011
04147 Exosome [BR:
tben04147
]
117496011
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117496011
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117496011
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117496011
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117496011
Exosomal proteins of other body fluids (saliva and urine)
117496011
Exosomal proteins of colorectal cancer cells
117496011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117496011
NCBI-ProteinID:
XP_034003560
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MRECLSIHVGQAGVQIGNTCWELYCLEHGIQPDGRKPGDQTYLNISGGGGDDSFNTFFME
TGTGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELI
DTVMDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAP
QVSTAVVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICCRKLDIERPSYTNLNRLMSQIV
SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISTEKAYHEQLSVAEITHSC
FEPANQFVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGI
NYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE
GEFSEAREDMAALEKDYEEVGADSLGDEDEEGEEY
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgcctctcaatccacgttggtcaggctggtgtgcagattggcaatacctgc
tgggagctttactgcctggaacatgggatccagccggacggcaggaagcctggtgaccag
acctacctgaacatctcaggaggaggaggggatgattccttcaacaccttcttcatggag
actggaactggaaagcacgtccccagagcagtgtttgttgacctggagcccactgtcatc
gatgaggtgcgcacggggacttaccgccagctgttccaccctgagcagctgatcactggc
aaggaggatgctgccaacaactacgcccgaggacactacaccatcggcaaggagctcatt
gacacagtgatggacagaatccgaaagctgtccgaccagtgcaccggtcttcagggtttc
ctggttttccacagcttcggagggggcaccggctctggtttcacctccctgctgatggag
cgtctgtccgtcgactacggcaagaagtccaaactggagttctccgtctacccagctccc
caggtgtccactgctgtggtggagccctacaacgccatcctgaccacccacaccaccctg
gagcactctgactgtgccttcatggttgataatgaggctatttatgatatctgctgtaga
aagcttgatattgagcgtccctcttacacaaacctgaacaggttaatgagtcaaattgtg
tcctccatcactgcctcccttcgttttgatggtgccctcaatgttgatctgacagagttc
cagaccaacttggtgccctatccccgtatccacttccctctggccacctatgcccctgtc
atctccacggaaaaagcttaccatgagcagctctcggtggcagaaatcactcattcctgt
ttcgagccagccaatcagtttgtgaaatgcgacccacgccacggtaaatacatggcctgc
tgccttttgtatcgtggtgatgtcgttcccaaagatgtgaacgctgccattgccaccatc
aaaaccaagcgctccatccagtttgtggactggtgccccactggtttcaaggtgggcatc
aactaccagccgcccactgtagttcctggtggagacctggccaaggtccagagggctgtg
tgcatgctgagcaacaccactgctattgcagaggcctgggctcggcttgaccacaagttt
gatctgatgtacgcaaagcgtgcctttgtgcactggtatgtgggtgagggtatggaggag
ggagagttctctgaggccagggaggacatggccgctctggagaaagattacgaggaggtt
ggagctgatagcctgggagatgaggatgaggaaggagaggagtattag
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