Trematomus bernacchii (emerald rockcod): 117496096
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Entry
117496096 CDS
T09643
Name
(RefSeq) cadherin-2-like
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117496096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117496096
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117496096
04090 CD molecules [BR:
tben04090
]
117496096
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117496096
Cell adhesion molecules [BR:
tben04515
]
Cadherins
Major cadherins
117496096
CD molecules [BR:
tben04090
]
Proteins
117496096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
Stevor
CD34_antigen
DUF5385
DUF3139
Motif
Other DBs
NCBI-GeneID:
117496096
NCBI-ProteinID:
XP_034003674
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MHILGIWMLMAAVQVVVLGGEAERLLSSKPGSLPCRRGFTQEEYIIQTDQELARGQAVFN
VSFMDCGRGKVWMEVGDSSDFGVSGDGVVFALRRLSLVGNEEAVEVIYARDLQSKQVWKT
RVHLHLHPQANSTGPLQVKLDDATLTQRVPEILFPWRSMVVRGDGTLRRVKRDWVIPPIN
VAENSRGQFPEDLVRIRSDRDNNRMLRYSVTGPGADQPPTGIFIISPISGELSVTKPLDR
EHISNFHLRAHAVDLNGNQVENPIDIVINVIDQNDNRPEFTHTIFNGTVPEGSKPGSFVM
TVTSVDKDDPKTANGMLRYKILSQNPQSPSTNMFTINNKTGDIITVAAGLDREKVTQYTL
IIQATDMEGNPTYGLSNTATTVIRVTDVNDNPPEFTTDTFFGEVHENRVNVIVANLTVTD
KDQPHTTAWAAVYRIIAGDPTGRFSIPTDPTTNEGLLTVVKPIDFELTRSFMLTVEAENE
VPLTRGMHLPRQSTATVSVRILDINESPEFSPNPKSIKLEEGLPAGSLLTTFTAQDPDRF
LRQTIRYSKMHDPANWLEIDPVNGRISTIAILDRESPYVKNNLYNVTFMASDNGIPPASG
TGTLQMYLIDINDNSPHVFPPEVEMCEKPHPNAINITASDPDLAPNGGPFAFELASRPSD
VRRNWTLHRINGEYAQLRLRIGTLASGIYEVPIMITDSGNLPMSNTSYLRVKVCQCDLHG
DCVDMERIIAAGLGTGAIIAILICIIILLVLVLMFVMWMKRRDKERQAKQLLIDPEDDVR
DNILKYDEEGGGEEDQDYDLSQLQQPDALEPECIKVGIRRLDERPLHHDHQYPIRSAAPH
PGDIGDFIHEGLKAADNDPTAPPYDSLLVFDYEGSGSNAGSLSSLHSSSSCSDQDYDYLG
DWGPRFRKLADLYGGGED
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcatattttggggatttggatgctgatggcggctgtgcaggttgtggttctgggtggg
gaggccgagcggctgttgtcaagcaagccggggtcgttgccatgcaggaggggttttact
caggaggaatacatcatccaaacggaccaagagctggcaaggggacaggctgtcttcaac
gtgagctttatggactgcggtagagggaaggtgtggatggaggttggagattcgtctgat
ttcggggtgagcggggacggtgttgtctttgccctgcgccgactcagcctggtggggaat
gaagaagctgtggaggtgatctacgctcgagacctgcagtccaaacaggtgtggaagacc
agagtgcacctccacctccatccacaggccaacagcacgggacctctgcaggtaaagctt
gatgatgcaacactgactcagcgggtaccagagatcttgtttccttggcgcagcatggtt
gtcaggggtgatggcactctgaggcgggtgaagagggactgggtcattccgccaatcaac
gtcgccgaaaactcacgaggacagttccctgaggacctcgtcaggattcgctcagacaga
gataacaacaggatgctgcgttacagtgtgacgggccccggggccgaccagcctccgacc
ggcatcttcatcatcagcccaatctcaggcgagctgtctgtcaccaagcctctggacaga
gagcacatctccaacttccatttgcgagcccacgctgtggacctgaatgggaatcaggtg
gagaaccccattgacatcgtcattaatgtcatcgaccagaacgacaacagaccagagttc
acacacaccatcttcaacggcaccgtaccggagggatccaagcctggatcttttgtgatg
acagtgacatccgtggacaaagatgatccaaaaactgccaatgggatgctgcgatataag
atcctctcccagaatccccagagcccctccaccaacatgttcaccattaacaacaagacc
ggtgacatcatcactgtggcagcaggcctcgatcgggagaaagtcacccagtacacactg
atcatccaggcgacagacatggaggggaaccccacctacggcctgtccaacaccgccacc
actgtcatcagggtcactgatgtcaacgacaacccccccgagttcaccacagacacattc
tttggggaagttcatgagaaccgggtgaatgtgatcgtagcgaacctgacggtgacagat
aaggaccagcctcacaccacagcctgggctgctgtgtaccgcatcatcgccggagacccc
accgggcgcttctccatccccactgaccccaccaccaacgaaggcctgctcactgtggtc
aagccaatcgacttcgagctgacccgctccttcatgctgacggtggaggcagagaacgag
gtcccgctgacccgtggcatgcacctgcctcgtcagtccacggcaaccgtctccgtacga
atcctggacatcaacgagagtccagagttcagccccaacccgaagtccatcaaactagag
gagggtctgcctgcggggtccctgcttaccactttcacagctcaagaccccgaccgcttc
ctgagacaaactatccggtactccaagatgcacgaccctgccaactggctggagatcgac
cccgttaacggtcggatttccaccatcgccatcctcgaccgagagtctccttacgtcaaa
aacaacctgtacaacgttaccttcatggcctctgataacggtatcccgcctgccagtggc
acaggcacccttcagatgtacctgatcgacataaatgacaactccccccacgtgttcccc
cctgaggtggaaatgtgtgagaagcctcatccaaacgccatcaacatcacagccagtgac
cccgacctggcccctaatggcggacccttcgccttcgagcttgccagtcgtccatcagat
gtacgccgcaactggacgctgcaccgcatcaacggcgagtacgcccagctccgactgagg
atcggcactctggccagcgggatctacgaggttcccatcatgatcacagactctgggaac
ctgcccatgtccaacacgtcctacctgagggtcaaggtctgccagtgcgatctccatgga
gactgtgtggacatggagcgaatcatcgctgctggtcttggcaccggtgccatcatcgcc
atcctcatctgtatcatcatactgttagtgctggtgctgatgtttgtgatgtggatgaag
aggagggataaggagcgccaggccaagcagctcctcatcgacccagaggacgacgtccgc
gacaacatcttgaaatatgacgaggagggagggggagaggaggatcaggactacgacctg
agtcagcttcagcagcctgatgccctggagccagagtgcatcaaggtggggatcagacga
ctggatgagaggcctctccaccatgaccaccagtaccccatccgctctgctgccccccac
ccaggagatattggagacttcatccatgagggcctgaaggcggcagacaacgaccccacc
gcccccccatacgactccctgctggtgtttgactacgagggcagcggctccaacgccggc
tccctcagctccctgcactcctcctccagctgcagcgaccaggactatgactacctcgga
gactgggggccccgcttccgcaaactggccgacctctacggcggaggggaggattag
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