Trematomus bernacchii (emerald rockcod): 117496147
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Entry
117496147 CDS
T09643
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117496147
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117496147
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
117496147
NCBI-ProteinID:
XP_034003745
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MNVDVDYVGSVSSGNGKLRLWLIEQVDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNRDE
DAALFKAWALFKGKFREGIDKLDPPTWKTRLRCALNKSNDFDELVDRSQLDISDPYKVYR
VIPEGAKKRPRQEDSPLSPSYQGHSPYPALQTQMPQYMPTPEGGWRDYCQEPAALPDLPF
PQCPCPPRSLPWQGPSMENGYQLRASIYSYGPADSQPSPFTLDAGIRSAEALSDFRLHVS
VYFRDALLREVTTSSPEGCHLTPCSPEEKHYLTPGGPEVVPLPVDSLSAQRRTDEGPPSP
PSTLDRGVLLWMGPDGLYARRLCPGRVYWQGGLSQYGDKLNKLEREVTCKLLHTQDYLTE
IQSYGLHGRPLPRFQVLLSFGDDILDAQRQRQSLTVQVEPLFARQLLYYAQQMGGHYYRS
YEHPGVTDHINTSEDYQRTITHHLHSSSLQE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagatgtggattacgtaggctcggtgagcagcgggaacgggaagctgcggctg
tggctcatcgagcaggtggacagcgggaagtacccggggctggtgtgggagaacgaggag
aagagcatcttcaggatcccctggaaacacgccgggaagcaggactacaaccgcgacgag
gatgccgcgcttttcaaggcctgggcgctgttcaaaggaaagttccgggaggggatcgat
aagttggacccccccacctggaagactcgcctccgctgcgccctgaacaagagcaatgac
ttcgatgagctggtggacaggagccagttggacatctcggacccctacaaagtgtaccgg
gtcatccctgagggcgccaagaaaaggccccggcaggaggacagtcctctgagtccgagt
tatcaggggcactccccctaccccgccctgcagacccagatgccacagtacatgcccaca
ccagagggtggatggagagattactgccaggagccggctgccctgcccgacctgcccttc
cctcagtgtccctgtcccccccgcagcctgccatggcagggcccgtccatggagaatgga
taccagctcagagcctccatctactcgtacggccccgctgacagccagccctcgcctttc
acactggacgccggcatcagatcagcagaggcgctctcagacttccgcctgcatgtgtct
gtatatttccgggacgctctgttgagggaggtgaccacctccagtccggaggggtgccac
ctcactccctgctccccggaggagaagcactacctgacgccaggaggtcccgaggtggtg
cctctgcctgtggacagcctctcagcccagaggaggacagatgagggtcccccgagcccc
ccctccaccctggacaggggggtgttactgtggatgggaccagacggactctacgcccgc
agactgtgtccgggcagggtgtactggcagggaggactgtcccagtacggagacaagctc
aacaaactggagagagaggtcacctgtaaactcctccacacgcaggactacctgacagag
attcagagttacgggctccatggtcggcctctacctcgcttccaggtcctgctgagtttt
ggagacgacatcctggacgcacagagacaaagacagagcctcacagtccaggtggagccg
ctgtttgccagacagctcctgtactacgcccagcagatggggggccactactaccgcagc
tacgaacaccccggagtcacagaccacataaacacatctgaggactaccagaggaccatc
acacatcatctgcacagcagcagcctgcaggagtga
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