Trematomus bernacchii (emerald rockcod): 117496162
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Entry
117496162 CDS
T09643
Symbol
ptgfr
Name
(RefSeq) prostaglandin F2-alpha receptor
KO
K04262
prostaglandin F receptor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04020
Calcium signaling pathway
tben04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117496162 (ptgfr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117496162 (ptgfr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tben04030
]
117496162 (ptgfr)
G protein-coupled receptors [BR:
tben04030
]
Rhodopsin family
Lipid
Prostaglandin
117496162 (ptgfr)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
DUF3481
Motif
Other DBs
NCBI-GeneID:
117496162
NCBI-ProteinID:
XP_034003762
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MSANGSSEAGCRSEVRPSNSTCSQKDLSVTASAISMTVGVLSNSLALFILVTSYSSIRIK
SKASFLLFASSLVVTDLLGHLINGSLVLIVYSFHKEWETFDPHHIVCSAFGACMVFFGLS
PLFLGSAMAVERCLGVTRPIFHSTALASRHMKRLLGLTWLLAALVALLPVLLLRPYRVQS
TRSWCFFYMEEPKDWLDVLLPLLFSMLGLMALLLSIVCNALTSCTLVQARLSRKHHCRGT
SYHIEMICQLQAIMLVSCVCWGPLLIRVIMMSINSNDEPAYLSLLMVVRMATWNQILDPW
VYILLRKAVLKKIFMLFHCCWGSNSHNLHRWQQSILRSSNETSNSGAGLTDSRFLSRLPV
PETAIESIALTRVTVL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaatgggagctcagaggcaggttgcaggtcagaggtcagacccagcaacagc
acctgcagccagaaggatctttctgtcaccgcctccgccatctccatgactgtgggcgtc
ctctccaacagcctcgccctcttcatcctcgtcacctcctacagtagcatccggatcaag
tccaaggcgtccttcctgctgttcgccagcagcctggtggtcacagacctgctgggtcac
ctgatcaacggctccctggtgctcatcgtgtacagcttccacaaggaatgggagacgttt
gacccccaccacattgtgtgcagcgccttcggggcgtgcatggtgttcttcggactgagc
cccttgttcctggggagcgccatggcggtggagcgctgcctcggagtcaccaggcctatc
ttccactccacagcgttagcctcacgccacatgaaacggctgctgggcctcacctggctg
ctggctgctctggtggcactgctgccggtgcttctgctgagaccctacagggttcagagc
accaggagctggtgcttcttctacatggaggaacccaaagactggctggatgtgctgctg
cctctgctgttctccatgctggggctgatggctctgctgctttccattgtgtgcaacgca
ctgaccagctgcactctggtgcaggccagactgagccgcaagcaccactgcagaggcacg
tcctaccacatcgagatgatctgccagctgcaggccatcatgttggtgtcctgcgtgtgc
tggggtccattactgatccgtgtcatcatgatgagcattaactccaacgacgagccggcg
tacctcagtctcctgatggtggttcgaatggccacgtggaaccagatcctggacccctgg
gtctacatcctgctgaggaaggctgttctgaagaagatcttcatgttgttccactgctgc
tggggctcaaactctcacaaccttcaccgctggcagcagagcatcctccgcagctcgaac
gagaccagcaactctggagctggtctcactgactcacgcttcctcagtcggttacctgtg
ccagaaactgccatcgaatccatcgccttaacccgggtcacagtgctttga
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