Trematomus bernacchii (emerald rockcod): 117496194
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Entry
117496194 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117496194
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117496194
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117496194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_5
zf-C3HC4_2
zf-RING_2
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
117496194
NCBI-ProteinID:
XP_034003815
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MLPGQHFTSFQETVTNCQLLCLAQTMHPYHSSQSSLDRLSSEGPAGNGHLRSSRSLLSTP
EQPALQLMCHHMESTQSCPSISRDSHCPVCLQTASFPVQTNCGHLFCAPCLIAYWRHGSW
LDAISCPLCRQKVSVLCNLFNESRSDSQSKEVLGEITDYNKRYSGAPRRVTDYLCDXPLL
LQLLTRSLGTMGGLVWLFFFRVALCCVGTVVSISYPPLDPVSSSSSSANPLGTDPSLCGL
LGVLDDLVVVILLLICVININQHMAPERGGQSATSSQGVMGSPL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgctgccagggcagcacttcacttccttccaggagacagtgactaactgtcagctgcta
tgtctggctcaaaccatgcacccctaccacagctctcaatccagtctggaccgtctctcc
tctgaaggtccggcgggtaacggccacctccggtcatccagatctctgctgagcacacca
gagcagccagcgttacagttaatgtgccaccatatggaatctacacagtcatgtccatcc
attagcagagactcacattgtccagtgtgtttgcagacggccagtttcccagtccagaca
aactgcggccatttgttctgcgctccctgtctgatcgcttattggagacatgggtcctgg
ttggatgcaataagctgccctctctgcagacagaaggtcagcgtgctctgtaatctattt
aacgagagtcgatcagacagtcagtcaaaggaagttcttggggaaatcacagactacaac
aaacgctattctggagccccaagaagggtcacagactacctgtgtgacngccctcttctc
ctgcaactgctgaccagaagcctgggcaccatgggaggactggtgtggttgtttttcttc
agggtggccctgtgctgtgtggggaccgtggtgtccatctcctaccctcctctggacccc
gtctcctcctcatcatcatcagccaatcccctgggaacagacccctccctgtgtggactg
ctgggggtcctcgatgacctggtggtggtcatcctgctgctgatctgcgttatcaacatc
aaccagcacatggcgccagagagaggaggacagtctgctacaagctcacaaggagtaatg
gggagtccactgtag
DBGET
integrated database retrieval system
