Trematomus bernacchii (emerald rockcod): 117496207
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Entry
117496207 CDS
T09643
Symbol
gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117496207 (gabra5)
04082 Neuroactive ligand signaling
117496207 (gabra5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117496207 (gabra5)
Ion channels [BR:
tben04040
]
Ligand-gated channels
GABA-A
117496207 (gabra5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117496207
NCBI-ProteinID:
XP_034003835
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MGDGKSFSSAMRRVCVCVLMLSITCRLSLSQEVTGTHKEAELNDNITIFTRILDGLLDGY
DNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLPL
NNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTIAAECPMQLEDF
PMDAHACPLKFGSYAYPVSEVVYTWTEEPAKSVVVGEEGSRLNQYHLIRHTVGTEDIYTS
RGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAMEAQ
QPKKKDPLALSKKPNNSCSSGLNYTTNLTKDSSISTISNSTAVQLKPTETKAPDPKKTYN
SVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVRQEAV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatggaaagagcttcagctctgcaatgaggcgagtgtgtgtctgcgtcctgatg
ctgagcatcacctgccggctgagcctctcccaggaagtaacgggaactcacaaagaggcc
gaactaaacgacaacatcaccatcttcacacgcatcctggacgggctgctggacggatat
gacaacagactgcggcccggactgggagagaaggtgacggagataaaaaccaacatcttc
gtcacaagcttcggacccgtctctgacacagaaatggaatacaccatcgacgtgttcttc
cgtcagagctggaaggacgagcgtctctgctttaaaggcccgatggagatgcttcctctc
aataatctgttagccagtaacatctggactccggacaccttcttcctcaacgggaagaaa
tccatcgctcacaacatgacgacccccaacaagctgctgaggctgaaggatgacggcacg
ctgctctacaccatgagactcacgatcgctgcagagtgccccatgcagctcgaggatttc
cccatggacgcccacgcttgtcctctaaaattcgggagctatgcctatccggtgtcggag
gtggtctacacgtggactgaggaaccagcaaagtctgtggttgttggcgaggaagggtct
cgcctcaatcagtaccatctgatcagacataccgtagggaccgaggacatctacaccagc
agaggtcagtacacggtgatgatggctcacttctacctgaagaggaagatcggatacttc
gtcatccagacctacatgccgtgcttcatgaccgtcatcctgtcccaggtttccttctgg
ctcaacagggagtcagtgccggcgaggacagtgtttggtgtgaccacggtgctcaccatg
accactctgagcatcagcgctcgaaactctcttcctaaagtcgcctacgccaccgccatg
gactggttcatcgccgtgtgctacgccttcgtgttctccgccctcatcgagtttgccacc
gtgaactacttcaccaaaaggagctgggcctgggacgggaagaaagcaatggaggcccaa
cagcccaagaagaaggaccctttggctctgtctaaaaagcccaacaactcctgctcgtcc
ggcttgaattacacaaccaacctcacaaaggactcgtccatctccactatttcaaacagc
actgcggtacaactcaaacccactgaaaccaaggccccggaccccaaaaagacttacaac
agtgtgagcaagatcgacaagatgtccagaatagtgttcccggtgctgtttgggaccttt
aacctggtgtactgggcaacgtatctcaacagggaacccgtgagacaagaggcggtttaa
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