Trematomus bernacchii (emerald rockcod): 117496215
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Entry
117496215 CDS
T09643
Symbol
pex5la
Name
(RefSeq) PEX5-related protein isoform X1
KO
K13342
peroxin-5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117496215 (pex5la)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117496215 (pex5la)
Membrane trafficking [BR:
tben04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117496215 (pex5la)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_8
TPR_17
TPR_14
TPR_CcmH_CycH
CFAP70_mid_TPR
TPR_11
TPR_16
TPR_12
TPR_9
CFAP70_TPR_C
RMD1-3
TPR_20
ANAPC3
CadC_C
DUF4810
Motif
Other DBs
NCBI-GeneID:
117496215
NCBI-ProteinID:
XP_034003846
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MYQGHLQGKDSRAADKTVAMVLKEIPSKASSEGTPLLTVTTKLVSEQQESRPLLSPSIDD
FLCETKCDGLSRAVTSNTAVLSSTLDLLDLSEPGERRSSKDKRSPLSSRVNSQKNSLRRK
KKETDETELIQVEVEQTEEIMRTPERVSLDSVNICTPLDKWEELNPHPERNGNRKWKMER
RRSSKNSSNEFLWSIDCKTQLEALNKNSLDGNTKVDPESALASQLNRQYISGRHARLTKE
QRLGSARLSRHQSLEEEFERAKAAVESDTEFWDKMQAEWEELARRNWLTENEQAQIPSSV
SPHEKGYYFHTDNPYKDLPNAFDEGQKKSREGDLQNAVLMLEGAVLQDPQDSEAWQVLGT
TQAENENEQSAIVSLQRCLELHPNNLTALMALAVSLTNTGMRNEACETLLRWLQHSPKYK
HLLKSKTHLMGSPNSPRKVSTANNVGKHESSLQSEAKELFLEAVQQNSESIDPDLQTGLG
VLYNVSGEFKKAVDAFNTALSVRPEDYLLWNRLGATLANGDRSEEAVEAYTRALELQPGF
IRSRYNLGISCINLGAHREAARNFLTALSLQRKSRSRQQSHQVMSGNIWAALRIALSMMD
QPELFQAANIGDLDLLMRAFNLDI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaggggcatttacaggggaaagactctagggctgcagataagactgttgccatg
gtcctgaaggagataccaagtaaggcgtcatcagaagggacgcccctcctcacagtgact
accaagctggtgagtgagcaacaagagagccgtccgcttttaagcccatccatcgacgat
ttcctctgcgagaccaagtgtgatgggctttcccgcgcagtgacttccaacacagctgtt
ctgtcttcaacactggacctgctggatctcagtgaacccggcgagaggaggagcagcaag
gacaaaaggagccctctgtcatcccgggtcaacagccagaagaacagcctacgcagaaag
aagaaggagacggacgagacggagctgatccaggtggaagttgaacagacagaagaaatc
atgaggaccccagagagagtgtcactagactcagttaacatttgtacaccgttggataaa
tgggaagagctgaatcctcaccctgagagaaatggcaacaggaaatggaagatggaaagg
cggcgttcttcaaaaaattcatccaatgaattcctatggtccatagactgtaaaacccaa
ttagaggcattgaacaagaactccttggacggaaacaccaaagtggatccagagtctgct
ctagcatctcaactcaacaggcagtatattagtggaagacatgctcgcctaaccaaggag
cagcggttgggcagcgcccgcctgtccagacatcagtccctggaggaggagtttgagcga
gccaaggctgctgttgagtcagataccgagttctgggataagatgcaggccgagtgggaa
gagctggctcggaggaactggctgacggaaaacgagcaggcgcagattccctcctctgtc
tctccacatgagaagggttactacttccacacagataatccttacaaagacttgcctaac
gcatttgatgagggacaaaagaagtctcgagagggagacttgcaaaatgctgtgcttatg
ctggaaggagccgtcctgcaggaccctcaagattcagaggcttggcaagtgctgggtacc
acgcaggcagaaaatgagaatgagcaatcagccatcgtctctctccaaaggtgtttggag
ctccaccctaacaacctcacagccctcatggctctggcagtgagcctgaccaacactggt
atgcgcaacgaggcctgtgagactctgctccgctggctgcagcacagcccgaagtacaag
cacctgctgaagtccaagacccacctgatgggatcccctaactccccacgcaaggtgtcc
actgccaacaacgtgggaaaacacgaaagctccctacaatctgaggccaaagagctcttc
ctggaagcagttcagcaaaactctgaaagcatcgacccagatttgcagacgggcctcggg
gtgctctacaacgttagcggagagttcaagaaagctgtagatgccttcaacacagcgctg
tcagtgcggcctgaggactacttgttatggaaccgcctgggggccacgctggcaaacggg
gaccggagcgaggaggcggtggaggcttacacgagggccctagagctgcagccggggttt
atcaggtcccgctacaacctgggcatcagctgtattaacctgggggcacatcgagaggcg
gccagaaacttcctgacggctttgagccttcagaggaaaagtcggagtcgccagcagtcc
caccaggtgatgtctggaaacatctgggctgctctgaggatagctttatccatgatggac
cagcccgaactcttccaggctgcgaatattggtgacctggatcttctcatgcgggccttc
aaccttgacatttga
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