Trematomus bernacchii (emerald rockcod): 117496220
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Entry
117496220 CDS
T09643
Name
(RefSeq) 5-hydroxytryptamine receptor 3A
KO
K04819
5-hydroxytryptamine receptor 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117496220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117496220
Ion channels [BR:
tben04040
]
Ligand-gated channels
Serotonin (5-HT3)
117496220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117496220
NCBI-ProteinID:
XP_034003857
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MNPSLKRISIISALLLIAVSLCCGKLTCKEGHSGPTHESMQAVFDLKSFRPAVNLSNPTI
SNISFTLYAVLGVNEKTQILTTFLWLRQYWRHEFLVWDPDECDGITRISLPAAQLWSPDI
IVYEFVDDDVSQACPYVYVNHTGHIRWDRMLRLVSSCNLQIFSFPFDVQNCSFTFGSYMH
TIRDVRLAPALTFEEMSGNSKRYLEASGEWELVDILGETSILKFGIDQWDIITIWVVIKR
RPVLYVVNLLIPSSFLMLIDIMSFYLPPHSVDRASFKMTLILGYTVFLLIMNDLLPSTAN
GTPIIGIYFSVCLALMVISLLETVIITNVLHHSSMKSKEVPNWVRVVVLKHIANLICYKW
PKDVQPPSEPQEDKPQSSNSNSESWNIQPAIQTPATHPNTNEGNQTLSIPELKQICQYLG
DLRAHLISLQKENELTNQWCQVGYVLDFLLFRVYLLLISCYAMVIICMWCVWISQT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatctctgaagagaatcagcatcatctcagctttactcttaattgcagtgtct
ctatgttgtggtaaactgacctgcaaagagggacacagcggtccgacccatgagtccatg
caggctgtgtttgacctgaagtccttcaggccagcagtgaacctcagcaaccccaccata
agtaacatctccttcaccctgtatgctgtgctgggggtgaatgagaaaacccaaatactc
actaccttcttgtggctgagacagtactggagacatgagtttctggtttgggaccctgat
gagtgtgacggcatcaccaggatttctctccccgcagcgcagctctggtctccagacatc
atcgtttatgagtttgtggatgacgatgtttcccaagcgtgtccttacgtctacgtcaac
cacaccggtcacatccgctgggacaggatgcttcggctcgtctcatcctgcaacctgcag
atcttcagttttccttttgatgtgcagaattgctcatttacatttggctcctacatgcac
actataagggatgtgaggttggctccagctttgacctttgaggaaatgtctggaaattca
aagcgctacctggaagccagcggagagtgggagctagtagacatcctgggagagacatcc
atcctcaagtttgggatcgaccagtgggacatcatcaccatctgggtggtcataaagcgg
cggccggtcctctacgtggtcaacctgctgatccccagctccttcctcatgctcatcgac
atcatgtccttctacctgcccccgcacagtgtggatcgcgcctccttcaagatgaccctc
atcctgggctacaccgtcttcctgctcatcatgaacgacctgctgcccagcacagccaac
ggcacgcccatcataggtatctatttctcggtgtgtctggccctcatggtcatcagtcta
ctggagacggtcatcattaccaatgtcctccaccacagctccatgaaatctaaagaagtc
ccaaactgggtgagagtggttgtcctcaaacacatagccaacctcatctgctacaaatgg
ccaaaggacgtccagccaccctctgaaccacaggaagacaaacctcaaagttcaaatagc
aactcggagtcatggaacatccaaccagccatccagacacctgccacgcacccaaacacc
aacgaaggtaatcaaactctgtccattcctgaactgaaacagatctgtcaatatctggga
gaccttcgtgcccatctcatctcgctgcagaaggagaacgagctgacgaaccagtggtgc
caagtaggatacgtccttgactttttgctcttccgcgtctatctgctgctcatttcatgt
tatgcgatggtcatcatctgcatgtggtgtgtctggatcagccagacctaa
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