Trematomus bernacchii (emerald rockcod): 117496247
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Entry
117496247 CDS
T09643
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117496247
Membrane trafficking [BR:
tben04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
117496247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
117496247
NCBI-ProteinID:
XP_034003885
LinkDB
All DBs
Position
Unknown
AA seq
1531 aa
AA seq
DB search
MASKEITAFGFVSKEITESIKKIIDKSSIKFIYGIKLDAKNGKTEDRILVLTTWRIYFLA
PKIPAKVESTFNFLEIRALNSHPDHQVIIDTDKTSYSLKFESRDHLNHVVSHINYALSRI
FNNSIFAPSICHSDSDLSEGSRKYSPSSETSVETQRACGGFSETYAALCDYNGISCKEEV
QWDVDTIYHSQDSREFNLLDFSHLESRDLAVIVASMAYNTWFTKLYCKDLRIGSEVTEQV
LHTVSKSSSLEEITLENAGLKSDFPQKMSAALSENPSSVIHSLNLAHNSLDNQGVSNLIQ
QVCRLSKGLRLLNLSKTSLTSKGVVSLSQALCSSDEYSNSLLHLDLSKNPGVLSGEDSSN
LYLFLSQPNCLVHLDLSGTDCSVDSLFGALLRGCCADLSFLNLSKNSFSHRKVKDTLPLL
SQFFSSAFSLTYVSMASMKLPPDVLRALLTGLTSNPHINDLHLDISGCELRSAGAAVIQE
LFPRVSSIGTLDISDNGLDADLLTVLPALSRHPSLKHLHLGKNFNIKNRVLDEVLQKLVQ
LIQEEECALQSLSLIDSRLRSRGTVLVNALGSNTCLKKVDLSGNNMDDIGAKMLSKALQI
NTTLRSVTWDRNNTSAAGFLDVARALEHNFILQYMPLPLSDISQAYRSAPERTEQALTKI
QRSLVRNNQTQRFSQRQALRLHQGLVTSTSEQVMERLCVRVQQQVCVLRGAGEMEEIQAA
KQVLKEARNSRALYPSLCELAHVLSVDGPVRQKLDSLAGELAKAADKELQVIVDSMVSLC
CELCPISSSAAERLSPPLSSVSERVSIPRSAIRTALMERAAQDIHRALEEVKLSVVSYLT
NSIVDQILQELYATHKTLNRQMSHFKRWDGTCEDGTGWRFNRNRDSLDITDEEFSTSIDT
IAIKKRSSRTRRIRPVSTRLSLCDDSSSSPPPSVPSYSSPLSRSASWEGLSELPTQGLPL
HHVTRVRPRPPRRHKGGHIPADTHSSENGGISPLDDGLPDFYTKRVLPDSQLSSLHKAHS
LRRKKRRNMLAIFGFRKNRNQTLSNQEPESEAEVYSDGCHFVATAPTGTATENVYTLLQP
PRSSARAGSPGEGADGKTIDHQGENALVLSPPPVPGIPHPGMGGSKHRFFSHREKSEVDA
VFEHPSESDRYWMDNKQRAGDTLHPDKPWIEARQGDEPAEKHAERQRFDSRPQDRTPGEP
RTIERQPDRYWTESRHLDRQWTVDRHTQRQIDRKIERQWMGGRQIDRLWSENRPTDLQVD
NQGTESRQGSKKTERQVQTLILSQRPLPPYPSDRTPSPQQDKDPLKSAEAAAPDWHQQDT
QDRDRQMCPDAGGGFTEGWRSSGGGGGRAASCSSKPDPPPQSSKPLLSKLRTRHRLESAD
TLPEEEGEVEEHGKTEKNEREKRRDSEGHPPPIPEKPKTSSYVTFPKESANERNLPPPPV
PPPTNKPLHGLPDRAASQGEEGLRPQAPVKPQRNRKAMSCDAGTDRESPNSVEKPPNRKP
PVKKPRLPQNRNKSLDMSDGFDSASSHSELL
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaagagatcactgcttttggtttcgtgagcaaagaaatcacagaaagcatc
aagaagattatcgataaatcatcgatcaagtttatttatggaatcaagcttgacgccaaa
aatggaaaaacagaggacaggatactggtcctcacaacatggcgtatttatttcctggct
ccaaagattcccgctaaggtggaatccacgttcaacttcttggagattcgagctttgaat
tcccaccctgatcaccaggttatcatcgacactgacaagaccagctactccctgaagttt
gagtcacgtgaccacctcaatcatgtggtcagccatattaattacgctctgtctcgaata
ttcaacaactccatttttgccccttccatctgtcattcagacagtgacctttctgagggg
agcaggaagtattcacccagctcagagacttcagtggagactcagagggcgtgtggaggc
ttctcggagacatacgccgctctgtgcgactataatggcatcagctgcaaggaggaagtg
cagtgggatgtggacaccatctatcactcccaggacagccgagagttcaacctgctggac
ttcagccacctggagagcagggatttggcggttattgttgcatcgatggcatacaacacc
tggttcactaaactgtactgcaaagacctgcggatagggtcagaggtcactgagcaggtc
ctgcacacggtcagcaaatcatccagcctggaggagatcactctggagaatgctgggtta
aaatcagacttcccacagaagatgtcagctgctctttcagagaacccttcctctgtcatc
cactccctcaacttggcccacaactctctggacaaccaaggagtgtccaacttaattcag
caggtgtgtcgcctcagcaagggtcttcgtctcctcaacctctccaagacttcactcacc
tccaaaggagtagtgtctctctctcaggctctgtgctccagcgatgagtactctaactcc
ctcctgcaccttgacctgagcaagaaccccggggtcctctcgggggaggattcctcgaac
ttgtatctgttcttgtctcagcccaactgcctggtccatttggatctgtcaggcacagat
tgctctgtggactcgctatttggggctcttctgagggggtgttgcgccgatctttccttt
ctgaatctttccaaaaattccttctcccacaggaaagtgaaggacacgctgccgctgtta
agtcagttcttcagctcagccttcagcctcacttatgtcagtatggcctctatgaagctg
ccccctgatgttctgagagctctcctaacagggttaacctccaatcctcatatcaatgac
cttcatctcgacatcagtggctgtgagctaaggtctgcaggagctgctgtaatccaggag
ctcttccccagggtctcctctatcggcactctggatatctcagacaacggtctcgatgca
gacttgctcacagtactgccggccctctccagacacccctccctgaaacatcttcacctg
ggcaagaacttcaacatcaaaaacagggttctggatgaagtcctgcagaagctggtgcaa
ctcatacaggaagaggaatgtgccctgcagtctctgtcccttatcgactcgcgcctgcgc
tctcgggggacggtgctggttaacgccctgggcagcaacacctgcctgaaaaaagtagac
ctgagcgggaacaacatggacgacatcggagccaagatgctgagcaaagccctgcagatc
aacaccacgctcaggagtgtgacatgggatcgcaacaacacctccgcagcaggatttcta
gatgttgccagagcacttgaacataacttcatcctgcagtatatgcctctacccctaagt
gacatcagccaggcgtaccgcagcgcccccgagaggacagagcaggcactgaccaagatc
cagcgctctctggtgaggaacaaccagactcagcgcttctctcagaggcaggctctgcgg
ctgcaccagggcctggtcaccagcacttccgaacaggtgatggagcgcctctgcgtgcgt
gtccagcagcaggtgtgtgtgttacgaggcgccggagagatggaggagattcaagctgct
aaacaagtgttaaaagaggccaggaactcccgtgctctgtacccttcactgtgtgagctg
gctcatgtgctgtctgtggacgggccggtgcggcagaaactggactctctggctggagaa
ctcgccaaagctgcagacaaagagctgcaggtgatcgtggactccatggtgtccctttgt
tgtgagctctgccctatatcttcttctgcggcagagaggctaagtcctccactatcatcc
gtctccgagcgcgtgtccatccctcgctctgccatccggacagctctgatggagagagcg
gcgcaggacatccaccgagccttagaagaagtgaagctgtctgtagtttcttatcttaca
aactccatcgttgaccagatcctgcaggagctctacgccacccataagaccctgaatcgg
cagatgtctcattttaaacgctgggacgggacctgtgaggacgggactggctggaggttc
aacagaaacagagactctctggacatcacagatgaggagttcagcaccagcatagataca
atagccattaagaagcgcagctcgagaacaagacgaattcgacctgtctccaccaggctg
agtctctgtgacgactccagctcctctccacccccctcggtgccgtcatactcctccccg
ctgtcccgctcggcatcctgggagggcctgtcggagctgcctacacagggtctgccactc
caccatgtgacacgggttaggccgaggcctccgcggaggcataaaggaggacacatccct
gctgatactcattccagtgaaaatggaggaataagcccccttgatgacgggctcccagat
ttctataccaaaagagttctccctgacagtcagctgtcctctctgcacaaagcgcactcg
ctgaggaggaagaagaggagaaatatgctggccatcttcggttttcgcaagaaccgcaac
caaactttgtccaatcaggaaccggagtctgaagcagaggtttattcagacgggtgtcac
tttgtggccacagcacccacagggacagccacagagaatgtatacacactccttcagcct
ccgaggtcctctgcaagagctggatctcctggtgaaggggctgatgggaaaactattgat
caccagggggaaaatgctctagttttaagtccgccacctgtgccaggcatccctcacccg
ggcatgggaggaagcaaacaccgcttcttttctcacagagagaaatctgaagtggacgct
gtgtttgaacatccgtcagagtcagacaggtactggatggacaacaaacaaagggcagga
gacactctgcacccagacaagccgtggatagaggccaggcaaggggacgaaccagcagag
aaacacgcagaaagacagcggtttgatagcaggccgcaagacagaacacctggagagccg
aggacaatagaacgacaaccagacaggtactggaccgagagcagacacttggacagacag
tggactgttgacagacacacccagcggcagattgacagaaagatagagaggcagtggatg
ggcggcagacagatagacagattgtggtcagagaacaggcccacagacttacaggtggac
aaccaggggacagagagcagacaaggaagcaaaaagacagagagacaagtgcagacgctt
attttgtctcaaaggccgctgcctccgtacccgtcggacaggacgccttcgccacaacag
gataaggatcctctgaaaagcgcagaggcagcagctccagactggcatcagcaggacacg
caggacagagacagacaaatgtgtcccgacgctggtggagggttcacagagggatggagg
agcagcggaggaggagggggtcgagctgcttcctgttcatctaaacccgatcccccgcca
caaagcagcaaacctttattgtccaaactgagaaccagacaccgcctcgagagcgcagac
actctaccagaggaggaaggcgaggtagaggaacatggaaagacggaaaagaacgagaga
gaaaaaagaagagactcggagggtcaccctcctccgatcccagaaaagccaaagacgtcc
tcgtatgtaacatttccaaaagaatcagccaatgagaggaacctacctccccctcctgtc
ccacctcctaccaacaagcctctgcacgggttaccagaccgagctgcaagtcaaggtgaa
gaaggattaagacctcaggcaccggtgaaaccacagagaaacagaaaggccatgtcttgt
gacgcaggcactgacagggaaagccctaatagcgttgagaagcccccaaatcgcaaaccc
cctgtgaaaaaacctagactaccccaaaacagaaataagtcactggacatgtctgacggc
ttcgactcagcctctagtcacagcgagctcttgtga
DBGET
integrated database retrieval system
